• 원예과학기술지
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• 제29권3호
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• pp.232-239
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• 2011

The genus Acorus is known as an indigenous medicinal plant. Genetic diversity of thirteen accessions of A. calamus and eight of A. gramineus, with an accession of Colocasia antiquorum and two of Iris pseudacorus as outgroups, were evaluated using RAPD markers for cluster analysis and principal coordinate analysis, and NIR spectroscopic profiles for principal component analysis.A total of 371 polymorphic bands were obtained by using the selected 12 random primers. The genetic distances were estimated from 0.03 to 0.31 within A. calamus and from 0.03 to 0.51 within A. gramineus. The dendrogram and three-dimensional plot separated the accessions into four distinct groups (A. calamus, A. gramineus, C. antiquorum, and I. pseudacorus). Moreover, for the diversity among genus Acorus, eleven A. calamus accessions, one A. gramineus accession, and two I. pseudacorus accessions were non-destructively analyzed from their leaves by NIR spectroscopy, which discriminated Acorus accessions like the RAPD analysis. Interestingly, thirteen accessions of A. calamus were clustered into two groups based on RAPD and NIR analyses, which indicates that there are two ecotypes of A. calamus in Korea. An accession (CZ) of A. calamus with yellow stripe on leaves was closely grouped with another (CX) at a genetic distance (GD) of 0.03, which shows that the stripe trait might be generated by chimeric mutation. The genetic distance between A. calamus and A. gramineus was revealed to be farthest from 0.80 to 0.88 GD. In genus Acorus the genetic diversity and genetic variation were identified by using RAPD marker technique and non-destructive NIRs.

• 한국산림과학회지
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• 제100권1호
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• pp.118-123
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• 2011

우리나라 전역에 걸쳐 잔존하고 있는 소나무림 315개소를 대상으로 식물사회학적 조사와 TWINSPAN 집락분석 및 DCA ordination 분석을 통하여 식생유형을 구분하고, 식생유형별 식물상 및 종조성 특성 그리고 종다양성 패턴 등을 분석하였다. 식생형은 크게 신갈나무형과 졸참나무형 등 2개의 상위단위와 8개 그룹의 하위단위로 유형화되었다. 식물상 조성에 있어서 종 및 속 수준에서의 풍부도는 국화과(21속, 45종)가 가장 높게 나타났고, 다음으로 백합과(18속, 34종), 장미과(17속, 34종), 콩과(15속, 25종) 등의 순으로 나타났다. 종풍부도, 다양성 및 균등도 등의 다양성 패턴은 식생형 별로 유의한 차이를 나타내었다. 또한, 해발고도에 따라 종풍부도는 일반적으로 감소하는 경향을 나타낸 반면, 종균등도는 증가하는 경향을 나타내었다.

• 생명과학회지
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• 제17권4호
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• pp.470-475
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• 2007

마가목 속(genus Serbus)은 아시아와 유럽에 분포되어 있는 목본이다. 유럽마가목(Sorbus commixta)은 유럽에 일차적으로 분포한다. 마가목 속 식물은 한국과 중국에서 약용으로 쓰인다. 한국내 마가목 속 식물에 대해 RAPD에 의한 유전적 변이와 계통관계를 조사하였다. 한국 내 마가목 속 식물은 비록 패치분포를 보이나 높은 유전적 다양도를 가지고 있었다. 26 시발체로 205 유전자좌위를 얻었으며 그 중 128 개(62.4%)는 다형성을 나타내었다. 마가목(S. commixta)이 가장 높은 유전적 다양도를 나타낸 반면(0.165), 유럽마가목(S. aucuparia)이 가장 낮은 유전적 다양도를 나타내었다(0.109). 종간 세대를 통해 이주하는 유전자수(Nm)는 매우 낮았다(평균 Nm=0.755). 분류군간 유사도는 0.786에서 0.963사이에 있었다. 이 분자마크(RAPD)로 한국내 분류군과 유럽종간 구분이 잘 되었다. 또한 종 특이 마크로 종 동정에 이용할 수 있었으며, 종의 보전이나 생식질 보전에 기초로 이용될 수 있을 것으로 사료된다.

• ALGAE
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• 제33권4호
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• pp.291-304
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• 2018

Lyngbya C. Agardh ex Gomont is a nonheterocytous cyanobacterial genus whose evolutionary history is still poorly known. The traditionally defined Lyngbya has been demonstrated to be polyphyletic, including at least five distinct clades, some of which have been proposed as new genera. Intraspecific diversity is also clearly underestimated in Lyngbya due to the lack of unique morphological characters to differentiate species. In this study, we describe the new genus Capillus T. A. Caires, C. L. Sant'Anna et J. M. C. Nunes from benthic marine environments, including two new Brazilian species (here described as C. salinus T. A. Caires, C. L. Sant'Anna et J. M. C. Nunes, and C. tropicalis T. A. Caires, C. L. Sant'Anna et J. M. C. Nunes), and two species yet to be described, one of them from India (Capillus sp. 2.1), and the other from United States of America, based on strain PCC 7419. Capillus species presented cross-wise diagonal fragmentation, assisted or not by necridic cells, which has not been previously mentioned for Lyngbya. Ultrastructural analyses showed that C. salinus and C. tropicalis have numerous gas vesicles, which are rarely described for benthic marine species. The new genus formed a well-supported clade, and the D1-D1' and Box B secondary structures of internal transcribed spacer also supported the proposal of its new species. These findings help to clarify the diversity of species in the Lyngbya complex and the taxonomy of the group, and highlight the need of further floristic surveys in tropical coastal environments, which remain poorly studied.

• 한국미생물·생명공학회지
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• 제27권6호
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• pp.515-517
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• 1999

From the soils collected seasonally at the 0.5~2cm and 50$\pm$1cm depths of riverside, different strains of actinomycetes were isolated and identified to the genus. At the 0.5~2cm depth, Streptomyces and rare actinomycetes were in total 73 and 62 strains, respectively. Streptomyces was approximately 2-fold more in spring and autumn than summer, and rare actinomycetes was at least 4-fold more in autumn and winter than spring. At the 50$\pm$1cm depth, Streptomyces and rare actinomycetes were in total isolated 53 and 41 strains, and these were at least 2-fold more diverse in autumn than spring, summer, and winter.

• Journal of Microbiology and Biotechnology
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• 제17권9호
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• pp.1407-1429
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• 2007

The Burkholderia genus consists of over 40 Gram-negative, ${\beta}$-proteobacteria species that occupy remarkably diverse ecological niches. This genus contains species pathogenic to human, animals, and plants, as well as species involved in promoting plant growth and biodegradation of pollutants. This is largely explained by the extraordinary versatility of Burkholderia, as reflected by the remarkable diversity of extracellular products released by these bacteria. We exhaustively surveyed the extracellular enzymes, siderophores, toxins, antimicrobials, and other secondary metabolites produced by the members of this very diverse genus. Available information on regulation, especially quorum sensing mechanisms, and secretion is highlighted.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2003년도 춘계 학술발표대회
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• pp.119-120
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• 2003

Many fungi were collected at Mt. Daedun Provincial Park between the periods from March 2001 to October 2002 and they were identified. According to the results, the fungi diversity included 2 division, 3 subdivisions, 5 classes, 4 subclasses, 12 orders, 35 families, 75 genera and 153 species. Among them Ileodictyon is unrecorded genus and Ileodictyon gracile, Mycena flosum-nivium and Tricholoma lascivum are newly to Korea. Dominant family are Tricholomataceae, Russulaceae and Polyporaceae;genus Amanita and species Collybia confluens and Russula emetica In useful fungi and ecological resources, edible fungi included 51 species; culture fungi 10; poisonous fungi 18: medicinal fungi 17: anticancer fungi 22: ectomycorrhizal fungi 26 and wood rotting fungi 51, In geographical distributions of Chonbuk areas, same species are 50 spcies of Jeongup ; 56 of Mt.Manduck : 84 of Mt.Jiri : 28 of Pyonsan national park : 59 of Cheonju arboretum and 51 of Mt,Sunun.

• 한국자원식물학회지
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• 제32권6호
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• pp.644-668
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• 2019

Dysphania ambrosioides (L.) Mosyakin & Clemants which belongs to Chenopodiaceae/Amaranthaceae sensu in APG system has been known as a useful plant in various fields as well as an invasive species spreading all over the world. To understand its phylogenetic relationship with neighbour species, we completed chloroplast genome of D. ambrosioides collected in Korea. Its length is 151,689 bp consisting of four sub-regions: 83,421 bp of large single copy (LSC) and 18,062 bp of small single copy (SSC) regions are separated by 25,103 bp of inverted repeat (IR) regions. 128 genes (84 protein-coding genes, eight rRNAs, and 36 tRNAs) were annotated. The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC and IR regions are 34.9%, 30.3%, and 42.7%, respectively. Distribution of simple sequence repeats are similar to those of the other two Dysphania chloroplasts; however, different features can be utilized for population genetics. Nucleotide diversity of Dysphania chloroplast genomes 18 genes including two ribosomal RNAs contains high nucleotide diversity peaks, which may be genus or species-specific manner. Phylogenetic tree presents that D. ambrosioides occupied a basal position in genus Dysphania and phylogenetic relation of tribe level is presented clearly with complete chloroplast genomes.

• Mycobiology
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• 제42권2호
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• pp.100-108
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• 2014

Twelve plant species were collected from the east coast of Korea to identify culturable endophytes present in their roots. The fungal internal transcribe spacer (ITS) region (ITS1-5.8SrRNA-ITS2) was used as a DNA barcode for identification of fungi. A total of 194 fungal strains were identified and categorized into 31 genera. The genus Penicillium accounted for the largest number of strains, followed by the genus Aspergillus. Furthermore, using 5 statistical methods, the diversity indices of the fungi were calculated at the genus level. After comprehensive evaluation, the endophytic fungal group from Phragmites australis ranked highest in diversity analyses. Several strains responsible for plant growth and survival (Penicillium citrinum, P. funiculosum, P. janthinellum, P. restrictum, and P. simplicissimum), were also identified. This study provides basic data on the sheds light on the symbiotic relationship between coastal plants and fungi.

• Mycobiology
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• 제49권4호
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• pp.308-345
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• 2021

Lactifluus (Pers.) Roussel is an ectomycorrhizal genus that was recently recognized to be distinct from the genus Lactarius. To date, 226 Lactifluus species have been reported worldwide. Misidentification of Lactifluus species is common because of intraspecific morphological variation, cryptic diversity, and the limited number of taxonomic keys available. Molecular data are indispensable for species delimitation; a multilocus phylogenetic analysis showed that most Asian Lactifluus species are not conspecific with morphologically similar species present on other continents. In particular, Korea has misused European and North American Lactifluus names. In this study, we evaluated the taxonomy of Lactifluus in Korea using both morphological and multilocus molecular (ITS, nrLSU, rpb1, and rpb2) data. We examined 199 Lactifluus specimens collected between 1980 and 2016, and a total of 24 species across the four Lactifluus subgenera were identified. All Korean species are distinct and clearly separated from European and North American species. Five taxa corresponded to previously described species from Asia and the remaining 19 taxa are confirmed as new species. Herein, we provide keys to the Korean Lactifluus species within their subgenera, molecular phylogenies, a summary of diversity, and detailed description of the new species.