• Title/Summary/Keyword: genetic factor

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An Optimal Design of High Space Factor BLDC Motor by Nonlinear Finite Element Method and Optimization Method (비선형 유한요소법과 최적화 기법을 이용한 고점적률 BLDC의 최적설계)

  • Oh, Seung-Kyun;Chung, Tae-Kyung;Jin, Yong-Sun
    • Proceedings of the KIEE Conference
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    • 1999.07a
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    • pp.388-390
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    • 1999
  • This paper discusses an optimal design of high space factor BLDC motor. Because of high space factor BLDC, Nonliear finite element method considering saturation of outer-rotor is used. For optimal design, a new niching genetic algorithm, namely "Restricted Competitions Selection" is used. This algorithm constructs an objective function using only the most important criteria and provides a designer with a set of solution rather than one solution. To verify its effectiveness, the new niching genetic algorithm is applied to an actual high space factor BLDC motor We show that a new designed high space factor BLDC motor is superior to the actual high space factor BLDC.

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Detection of superior genotype of fatty acid synthase in Korean native cattle by an environment-adjusted statistical model

  • Lee, Jea-Young;Oh, Dong-Yep;Kim, Hyun-Ji;Jang, Gab-Sue;Lee, Seung-Uk
    • Asian-Australasian Journal of Animal Sciences
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    • v.30 no.6
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    • pp.765-772
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    • 2017
  • Objective: This study examines the genetic factors influencing the phenotypes (four economic traits:oleic acid [C18:1], monounsaturated fatty acids, carcass weight, and marbling score) of Hanwoo. Methods: To enhance the accuracy of the genetic analysis, the study proposes a new statistical model that excludes environmental factors. A statistically adjusted, analysis of covariance model of environmental and genetic factors was developed, and estimated environmental effects (covariate effects of age and effects of calving farms) were excluded from the model. Results: The accuracy was compared before and after adjustment. The accuracy of the best single nucleotide polymorphism (SNP) in C18:1 increased from 60.16% to 74.26%, and that of the two-factor interaction increased from 58.69% to 87.19%. Also, superior SNPs and SNP interactions were identified using the multifactor dimensionality reduction method in Table 1 to 4. Finally, high- and low-risk genotypes were compared based on their mean scores for each trait. Conclusion: The proposed method significantly improved the analysis accuracy and identified superior gene-gene interactions and genotypes for each of the four economic traits of Hanwoo.

Hepatitis B Virus DNA Polymerase Displays an Anti-Apoptotic Effect by Interacting with Elongation Factor-1 Alpha-2 in Hepatoma Cells

  • Niu, Xianli;Nong, Shirong;Gong, Junyuan;Zhang, Xin;Tang, Hui;Zhou, Tianhong;Li, Wei
    • Journal of Microbiology and Biotechnology
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    • v.31 no.1
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    • pp.16-24
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    • 2021
  • Hepatitis B virus (HBV) genome P-encoded protein HBV DNA polymerase (Pol) has long been known as a reverse transcriptase during HBV replication. In this study, we investigated the impact of HBV Pol on host cellular processes, mainly apoptosis, and the underlying mechanisms. We showed a marked reduction in apoptotic rates in the HBV Pol-expressed HepG2 cells compared to controls. Moreover, a series of assays, i.e., yeast two-hybrid, GST pull-down, co-immunoprecipitation, and confocal laser scanning microscopy, identified the host factor eEF1A2 to be associated with HBV Pol. Furthermore, knockdown of eEF1A2 gene by siRNA abrogated the HBV Pol-mediated anti-apoptotic effect with apoptosis induced by endoplasmatic reticulum (ER) stress-inducer thapsigargin (TG), thus suggesting that the host factor eEF1A2 is essential for HBV Pol's anti-apoptosis properties. Our findings have revealed a novel role for HBV Pol in its modulation of apoptosis through integrating with eEF1A2.

Functional Analysis of the Heptasequence SPTSPTY in the Transcriptional Activation Domain of Rat Nuclear Factor 1-A

  • Hwang, Jung-Su;Son, Kyung-No;Rho, Hyune-Mo;Kim, Ji-Young
    • BMB Reports
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    • v.32 no.5
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    • pp.468-473
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    • 1999
  • Nuclear Factor 1 (NF1) proteins are a family of transcriptional factors consisting of four different types: NF1-A, -B, -C, and -X. Some NF1 transcription factors contain a heptasequence motif, SPTSPSY, which is found as a repeat sequence in the carboxy terminal domain (CTD) of the largest subunit of RNA polymerase II. A similar heptasequence, SPTSPTY, is contained in rat liver NF1-A at a position between residues 469 and 475. In order to investigate the roles of the individual amino acids of the heptasequence of rat liver NF1-A in transcriptional activation, we systematically substituted single and multiple amino acid residues with alanine residue(s) and evaluated the transcriptional activities of the mutated NF1-A. Substitution of a single amino acid reduced transcriptional activity by 10 to 30%, except for the proline residue at position 473, whose substitution with alanine did not affect transcriptional activity. However, changes of all four serine and threonine residues to alanine or of the tyrosine residue along with the serine residue at position 469 to alanine reduced the activity to almost background levels. Our results indicate that multiple serine and threonine residues, rather than a single residue, may be involved in the modulation of the transcriptional activities of the factor. Involvement of the tyrosine residue is also implicated.

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Human Liver Specific Transcriptional Factor TCP10L Binds to MAD4

  • Jiang, Dao-Jun;Yu, Hong-Xiu;Hexige, Sa-Yin;Guo, Ze-Kun;Wang, Xiang;Ma, Li-Jie;Chen, Zheng;Zhao, Shou-Yuan;Yu, Long
    • BMB Reports
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    • v.37 no.4
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    • pp.402-407
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    • 2004
  • A human gene T-complex protein 10 like (TCP10L) was cloned in our lab. A previous study showed that it expressed specifically in the liver and testis. A transcription experiment revealed that TCP10L was a transcription factor with transcription inhibition activity. In this study, the human MAD4 was identified to interact with TCP10L by a yeast two-hybrid screen. This finding was confirmed by immunoprecipitation and subcellular localization experiments. As MAD4 is a member of the MAD family, which antagonizes the functions of MYC and promotes cell differentiation, the biological function of the interaction between TCP10L and MAD4 may be to maintain the differentiation state in liver cells. Also, we propose that the up-regulation of Myc is caused by the down-regulation of TCP10L in human hepatocarcinomas.

Hereditary cancer and genetic counseling (유전성 암과 유전상담)

  • Jeong, Seung-Yong
    • Journal of Genetic Medicine
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    • v.4 no.1
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    • pp.15-21
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    • 2007
  • Hereditary syndromes cause approximately 5 to 10% of overall cancer cases. Cancer related with genetic syndromes are found elsewhere, including stomach, breast, colorectum, ovary, brain and so on. Because hereditary cancers are due to germline mutations, these patients have unique clinical features distinct from sporadic cancer. Generally these features include (i) early age-of onset of cancer, (ii) frequent association with synchronous or metachronous tumors, (iii) frequent bilateral involvement in paired organs (iv) frequent association with other site tumors or characteristic clinical manifestation specific to each genetic syndrome. Due to these differences, the management strategy for patients with hereditary cancer is quite different from that for sporadic cancer. Additionally, there are important screening and surveillance implications for family members. Genetic counselling is prerequisite to these families for risk assessment by pedigree analysis, and guidance to clinical or genetic testing. The genes responsible for these syndromes has recently identified, as a result, genetic testing has become important determining factor in clinical decisions.

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A Study on the Genetic Algorithm of Thread's Connection Method for Intarsia Sweater Weaving (인타샤(Intarsia) 스웨터 직조를 위한 실 연결 방법의 유전자 알고리즘 해법 연구)

  • Huh, Sang Moo;Kim, Woo Je
    • Korean Management Science Review
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    • v.32 no.1
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    • pp.35-47
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    • 2015
  • The purpose of this paper is to find an optimal weaving connection method of sweater threads while weaving intarsia sweater by the genetic algorithm. The objective function was devised to minimize labor cost and lessen the amount of thread usage. In order to create the parental population group in the genetic algorithm, we developed five thread connection methods. Besides, elite chromosome screening methods for the offspring group was selected both to the whole chromosome thread elite and to a color-coded elite thread chromosome. Commonly used diamond pattern in Intarsia sweater manufacturing was applied to the experiments. The experimental results showed that thread system saved the labor and material costs than woven method under the existing software. When weaving Intarsia sweater in the field, we can apply the developed genetic algorithm to improve productivity of weaving connection method.

Optimal Design for Steam-turbine Rotor-bearing System Using Combined Genetic Algorithm (조합 유전 알고리듬을 이용한 증기 터빈 회전체-베어링 시스템의 최적설계)

  • Kim, Young-Chan;Choi, Seong-Pil;Yang, Bo-Suk
    • Transactions of the Korean Society for Noise and Vibration Engineering
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    • v.12 no.5
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    • pp.380-388
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    • 2002
  • This paper describes the optimum design for low-pressure steam turbine rotor of 1,000 MW nuclear power plant by using a combined genetic algorithm, which uses both a genetic algorithm and a local concentrate search algorithm (e.g. simplex method). This algorithm is not only faster than the standard genetic algorithm but also supplies a more accurate solution. In addition, this algorithm can find the global and local optimum solutions. The objective is to minimize the resonance response (Q factor) and total weight of the shaft, and to separate the critical speeds as far from the operating speed as possible. These factors play very important roles in designing a rotor-bearing system under the dynamic behavior constraint. In the present work, the shaft diameter, the bearing length, and clearance are used as the design variables. The results show that the proposed algorithm can improve the Q factor and reduce the weight of the shaft and the 1st critical speed.

A PID Genetic Controller Design Combined Simulated Annealing (시뮬레이티드 어닐링과 조합한 PID 유전 제어기 설계)

  • Hong, Young-Joon;Kim, Lark-Kyo;Nam, Moon-Hyun
    • Proceedings of the KIEE Conference
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    • 2000.07d
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    • pp.2655-2657
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    • 2000
  • this paper suggests a genetic algorithms combining simulated annealing for PID factor tunning. This paper made Off-Line control parameter tuning of the DC servo motor for the speed, In this paper new method to design PID controller through proposed genetic algorithm. Two experiments compared both the PID controller using genetic algorithms and PID controller using proposed genetic algorithm for a DC-servo motor. The result of two experiments was safty higher PID controller using proposed genetic algorithm than PID controller using genetic algorithm.

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