• Journal of Radiation Protection and Research
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• 제28권3호
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• pp.165-172
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• 2003

본 연구에서는 국내 원자력발전소가 위치한 지역의 토양(영광, 울진, 고리, 고성, 월성)에 존재하는 휴믹산(HA)을 추출하여 각 시료의 원소성분 및 분광학적 방법(UV/Vis, IR, CPMAS $^{13}C$ NMR)을 이용한 물질 특성을 조사하였고, Aldrich HA과 함께 비교 분석하였다. 분자량 크기 분포의 차이는 한외여과법을 이용하여 조사하였다. 원소분석 결과, 울진 지역의 HA에서 가장 높은 산소 함량비를 보였으며, 고리와 고성지역의 HA에서 상대적으로 낮은 산소 함량비를 보였다(O/C: 0.51(UJHA) vs. 0.43(KRHA), 0.46(KSHA)). 분자량 크기 분포는 울진과 영광 지역의 HA가 고리와 고성 지역의 HA에 비하여 30,000 daltons이상의 고분자가 더 높게 존재함을 알 수 있었다. CPMAS $^{13}C$ NMR, UV/Vis., IR 등의 분광학적 특성분석 결과, 울진과 영광 지역의 HA가 고리, 고성 및 월성 지역의 HA에 비하여 상대적으로 높은 방향족성(aromaticity)과 산소 포함 작용기의 함량이 높은 특성을 보였다. 이상의 결과로 볼 때, 울진과 영광지역의 HA가 상대적으로 더 높은 휴믹화(humification) 단계의 물질 특성을 가짐을 알 수 있었으며, 금속이온과의 반응성이 더 높을 것으로 예측된다.

• 한국작물학회지
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• 제51권spc1호
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• pp.179-184
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• 2006

본 시험 결과를 요약하면 다음과 같다. 1. 공시교잡종의 평균 과피두께는 $37{\mu}m$로 얇은 특성을 보였는데 특히 CNU108 교잡종이 $30.3{\mu}m$로 가장 얇은 특성을 보였고 출사일수는 CNU69와 CNU202 등이 59일로 가장 빨랐으나 CNU160 교잡종은 68일로 본 교잡종들 중에서 가장 늦었다. 2. CNU70과 CNU138의 교잡종들은 높은 항산화효소(xanthin oxidase, catalase, superoxide dismutase)의 활성을 나타내었고, 특히 CNU160과 CNU193 교잡종은 각각 94.8%, 94.6% 등으로 높은 항산화력(EDA)을 나타내었다. 3. CNU109와 CNU34의 교잡종에서는 전반적으로 높은 항산화효소 활성 및 항산화력을 나타내었다. 따라서 CNU34, CNU70, CNU108, CNU138, CNU193 등의 교잡종 찰옥수수가 항산화 효과가 높은 고기능성 유색 찰옥수수인 것으로 사료되었다.

• 한국미생물·생명공학회지
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• 제26권4호
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• pp.297-302
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• 1998

Bacillus stearothermophilus No.236 xylB 유전자가 삽입된 재조합 플라스미드 pKMG12를 가지고 있는 E. coli HB101 균주를 이용하여 B. stearothermophilus $\beta$-xylosidase B을 생산, 정제하고 효소의 일반특성을 조사하였다. Ammonuim sulfate 분획, DEAE-Sepharose CL-6B 이온 교환 크로마토그래피, Sephacryl S-200 및 Superdex 200HR 젤 크로마토그래피의 과정을 거쳐 정제하였으며 정제된 효소는 SDS-PAGE 및 zymogram 실험을 통해 $\beta$-xylosidase B의 단백질임을 확인하였다. 정제 $\beta$-xylosidase B는 반응액의 수소이온 농도와 온도에 매우 민감하며 최적 활성 pH 및 온도는 각각 pH 6.5와 $50^{\circ}C$로 결정되었다. $\beta$-Xylosidase 활성은 1 mM $Mn^{2+}$ 첨가에 의해 약 35% 활성화됨을 보였으나 $Ag^{+}$, $Cu^{2+}$ 및 $Hg^{2+}$ 등의 중금속이온의 존재하에서는 거의 완전한 저해를 나타내었다. 또한 본 효소는 비록 높지는 않으나 $\alpha$-arabinofuranosidase 활성도 가지고 있어 B. stearothermophilus No 236의 $\beta$-xylosidase A 효소 보다 최소한 arabinoxylan의 분해에 있어서 더 우수한 효소로 판단되며 o-nitrophenyl-$\beta$-D-xylopyranoside 기질에 대한 $K_{m}$ 값과 $V_{max}$ 값은 각각 6.43 mM과 $1.45\mu$mole/min 로 계산되었다. 한편, $\beta$-xylosidase B 분자량은 gel 여과법으로는 약 160 kDa, 그리고 SDS-PAGE에 의해서는 약 54 kDa로 측정되어 본 효소는 trimer의 구조를 가지고 있음을 알 수 있었다.

• 한국미생물학회:학술대회논문집
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• 한국미생물학회 2001년도 추계학술대회
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• pp.46-53
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• 2001

A commensal thermophile, Symbiobacterium toebii, isolated from hay compost (toebii) in Korea commensally interacted with a thermophilic Geobacillus toebii sp. nov., which was a new species within the genus Geobacillus on the basis of the phenotypic traits and molecular systematic data. S. toebii required the crude extracts and/or culture supernatant of the Geobacillus toebii for axenic growth and could grow on the temperature between 45 and $70^{\circ}C$ (optimum: $60^{\circ}C$; 2.4 h doubling time) and pH 6.0 and 9.0 (optimum: pH 7.5). The G+C content of the genomic DNA was $65 mol\%$, and the major quinones were MK-6 and MK-7. A phylogenetic analysis of its 16S rDNA sequence indicated that Symbiobacterium toebii was closely related with solely reported Symbiobacterium thermophilum. The presence of the commensal thermophile 16S rDNA and accumulation of indole in all the enriched cultures indicate that Symbiobacterium toebii is widely distributed in the various soils. The genome of S. toebii constituted a circular chromosome of 3,280,275 base pairs and there was not an extra-chromosomal element (ECE). It contained about 4,107 predicted coding sequences. Of these protein coding genes, about $45.6\%$ was encoded well-known proteins and annotated the functional assignment of 1,874 open reading frames (ORFs), and the rest predicted to have unknown functions. The genes encoding thermostable tyrosine phenol-lyase and tryptophan indole-lyase were cloned from the genomic DNA of S. toebii and the enzymatic production of L-tyrosine and L-tryptophan was carried out with two thermostable enzymes overexpressed in recombinant E. coli.

• 한국식품영양학회지
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• 제23권4호
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• pp.526-530
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• 2010

Synechocystis sp. PCC6803의 type II Isopentenyl diphosphate isomerase gene(sll1556, Syidi2)의 특성을 살펴보기 위하여 ${\Delta}idi$인 E. coli $DH5{\alpha}$를 제작하고, 이 균주에서 cloning하고 발현시켰다. 라이코펜 합성 유전자들(crtE, crtB, and crtI)과 mevalonate pathway 유전자들(MvK1, MvK2, Mvd)를 함유한 ${\Delta}idi$ E. coli $DH5{\alpha}$ 균주를 mevalonate가 함유된 LB 배지에서 배양하면 mevalonate pathway 유전자들을 함유한 E. coli $DH5{\alpha}$균주는 mevalonate에 의해 생성된 isopentenyl diphosphate의 독성에 의해 매우 느린 성장을 보였다. 라이코펜 합성유전자들과 mevalonate 합성유전자들을 함유한 ${\Delta}idi$ E. coli $DH5{\alpha}$ 균주에 Syidi2를 도입한 결과, mevalonate가 함유된 LB배지에서 균체의 성장이 완전히 회복되었으며, 라이코펜이 합성되었음을 나타내는 붉은 균락이 형성되었다. 이에 따라, SyIdi1과 ECidi를 도입하여 비교한 결과, 라이코펜 합성 유전자들과 mevalonate pathway 유전자들을 함유한 ${\Delta}idi$ E. coli $DH5{\alpha}$ 균주 자체와 SyIdi1을 도입한 라이코펜 합성 유전자들과 mevalonate pathway 유전자들을 함유한 ${\Delta}idi$ E. coli $DH5{\alpha}$ 균주는 IPP의 독성에 의해 성장이 매우 느렸으나, SyIdi2, RSidi, HPidi, 및 ECidi를 함유하고 있는 ${\Delta}idi$ E. coli $DH5{\alpha}$ 균주는 균체의 성장과 라이코펜의 합성을 완전히 회복하였으며, 그중 가장 우수한 라이코펜 생합성 결과를 나타낸 것은 pSUP-LYCSyIdi2로서 균체당 라이코펜 생성량이 control 대비 2.8배이었다.

• Reproductive and Developmental Biology
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• 제35권1호
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• pp.9-15
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• 2011

The functional cardiovascular system is comprised of distinct mesoderm-derived lineages including endothelial cells, vascular smooth muscle cells and other mesenchymal cells. Recent studies in the human embryonic stem cell differentiation model have provided evidence indicating that these cell lineages are developed from the common progenitors such as hemangioblasts and cardiovascular progenitor cells. Also, the studies have suggested that these progenitors have a common primordial progenitor, which expresses KDR (human Flk-1, also known as VEGFR2, CD309). We demonstrate here that sustained activation of BMP4 (bone morphogenetic protein 4) in hESC line, CHA15 hESC results in $KDR^+$ mesoderm specific differentiation. To determine whether the $KDR^+$ population derived from hESCs enhances potential to differentiate along multipotential mesodermal lineages than undifferentiated hESCs, we analyzed the development of the mesodermal cell types in human embryonic stem cell differentiation cultures. In embryoid body (EB) differentiation culture conditions, we identified an increased expression of $KDR^+$ population from BMP4-stimulated hESC-derived EBs. After induction with additional growth factors, the $KDR^+$ population sorted from hESCs-derived EBs displays mesenchymal, endothelial and vascular smooth muscle potential in matrix-coated monolayer culture systems. The populations plated in monolayer cultures expressed increased levels of related markers and exhibit a stable/homologous phenotype in culture terms. In conclusion, we demonstrate that the $KDR^+$ population is stably isolated from CHA15 hESC-derived EBs using BMP4 and growth factors, and sorted $KDR^+$ population can be utilized to generate multipotential mesodermal progenitors in vitro, which can be further differentiated into cardiovascular specific cells.

• The Plant Pathology Journal
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• 제25권4호
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• pp.344-351
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• 2009

A biocontrol bacterium Bacillus licheniformis N1 grown in nutrient broth showed no chitinolytic activity, while its genome contains a gene which encodes a chitinase. The gene for chitinase from B. licheniformis N1 was amplified by PCR and the deduced amino acid sequence analysis revealed that the chitinase exhibited over 95% identity with chitinases from other B. licheniformis strains. Escherichia coli cells carrying the recombinant plasmid displayed chitinase activity as revealed by the formation of a clear zone on chitin containing media, indicating that the gene could be expressed in E. coli cells. Chitinase gene expression in B. licheniformis N1 was not detected by RT-PCR analysis. The protein was over-expressed in E. coli BL21 (DE3) as a glutathione S-transferase fusion protein. The protein could also be produced in B. subtilis 168 strain carrying the chitinase gene of N1 strain. The crude protein extract from E. coli BL21 carrying GST fusion protein or culture supernatant of B. subtilis carrying the chitinase gene exhibited enzyme activity by hydrolyzing chitin analogs, 4-methylumbelliferyl-$\beta$-D-N,N'-diacetylchitobioside and 4-methylumbelliferyl-$\beta$-D-N,N',N"-triacetylchitotrioside. These results indicated that even though the chitinase gene is not expressed in the N1 strain, the coding region is functional and encodes an active chitinase enzyme. Furthermore, B. subtilis 168 transformants expressing the chitinase gene exhibited antifungal activity against Fulvia fulva by suppressing spore germination. Our results suggest that the proper engineering of the expression of the indigenous chitinase gene, which will lead to its expression in the biocontrol strain B. licheniformis N1, may further enhance its biocontrol activity.

• 한국미생물·생명공학회지
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• 제47권4호
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• pp.630-638
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• 2019

아산화질소는 이산화탄소보다 약 310배 높은 지구온난화 지수를 갖는 주요 온실가스이다. 본 연구에서는 아산화질소 배출저감을 위해 고도처리슬러지를 접종원으로 이용하여 아산화질소 환원 컨소시움을 확보하였다. 이 컨소시움의 우점종은 Sulfurovum (17.95%), Geobacter (14.63%), Rectinema(11.45%)와 Chlorobium (8.24%)이었다. 아산화질소 환원 컨소시움의 활성에 미치는 C/N 비(mol·mol-1), 탄소원의 영향을 조사한 결과, C/N 비 6.3 및 아세트산을 탄소원으로 공급한 조건에서 최대 아산화질소 환원 활성을 나타냈다. 또한, 본 컨소시움의 3,000 ppm 이하의 아산화질소 농도 범위에서 아산화질소 농도가 증가할수록 환원속도도 증가하였다. 속도론적 해석 결과, 아산화질소 환원 컨소시움의 최대 아산화질소 환원 속도는 163.9 ㎍-N·g VSS^-1·h^-1이었다. 본 Consortium은 아산화질소를 N2로 환원하는데 관여를 nosZ 뿐만 아니라, 질산염을 아질산염으로 환원하는 narG, 아질산염을 일산화질소로 환원하는 nirK 유전자 및 일산화질소를 아산화질소를 환원하는 norB 유전자를 모두 보유하고 있었다. 이는 본 컨소시움은 아산화질소 제거 공정 뿐 만 아니라, 탈질공정에도 활용 가능한 유용한 미생물 자원임을 의미한다.

• Reproductive and Developmental Biology
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• 제36권3호
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• pp.225-230
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• 2012

Interferon induced transmembrane protein-1 (Ifitm-1) has been reported to have an important role in primordial germ cell formation, and it has expressed in female reproductive organ. In the present study, Ifitm-1 gene expression was identified in testes and all part of epididymis using western immunoblot and immunohistochemistry. Interestingly, Ifitm-1 expression was observed on the head of spermatozoa. To investigate the role of Ifitm-1 gene expression in behavior of spermatozoa after acrosome reaction, fresh sperm was incubated with calcium ionophore to induce acrosome reaction, whereas the expression of Ifitm-1 was not altered after the acrosome reaction. Then to identify the effect of Ifitm-1 in sperm motility and other seminal parameters, different concentration of Ifitm-1 antibody was incubated with spermatozoa, and seminal parameters were assessed using computer-assisted semen analysis (CASA). Interestingly, motility, progressive, and VAP were increased in the sperm with Ifitm-1 antibody treated compared to rabbit serum, however other parameters such as straightness were not changed. In order to identify the functional significance of Ifitm-1 in fertilization, capacitated spermatozoa were pre-incubated with anti-Ifitm-1 antibody and subsequently examined the ability to adhere to mouse oocytes. However, any defection or alteration in sperm-egg fusion was not found, Ifitm-1 antibody treated or non-treated spermatozoa showed a normal penetration. Although the precise role of Ifitm-1 in sperm motility and following fertilization need to be elucidated, this study suggests that the activation of Ifitm-1 on the sperm may enhance the motility of spermatozoa in mice.

• Asian-Australasian Journal of Animal Sciences
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• 제28권11호
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• pp.1537-1544
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• 2015

Meat and carcass quality attributes are of crucial importance influencing consumer preference and profitability in the pork industry. A set of 400 Berkshire pigs were collected from Dasan breeding farm, Namwon, Chonbuk province, Korea that were born between 2012 and 2013. To perform genome wide association studies (GWAS), eleven meat and carcass quality traits were considered, including carcass weight, backfat thickness, pH value after 24 hours (pH24), Commission Internationale de l'Eclairage lightness in meat color (CIE L), redness in meat color (CIE a), yellowness in meat color (CIE b), filtering, drip loss, heat loss, shear force and marbling score. All of the 400 animals were genotyped with the Porcine 62K SNP BeadChips (Illumina Inc., USA). A SAS general linear model procedure (SAS version 9.2) was used to pre-adjust the animal phenotypes before GWAS with sire and sex effects as fixed effects and slaughter age as a covariate. After fitting the fixed and covariate factors in the model, the residuals of the phenotype regressed on additive effects of each single nucleotide polymorphism (SNP) under a linear regression model (PLINK version 1.07). The significant SNPs after permutation testing at a chromosome-wise level were subjected to stepwise regression analysis to determine the best set of SNP markers. A total of 55 significant (p<0.05) SNPs or quantitative trait loci (QTL) were detected on various chromosomes. The QTLs explained from 5.06% to 8.28% of the total phenotypic variation of the traits. Some QTLs with pleiotropic effect were also identified. A pair of significant QTL for pH24 was also found to affect both CIE L and drip loss percentage. The significant QTL after characterization of the functional candidate genes on the QTL or around the QTL region may be effectively and efficiently used in marker assisted selection to achieve enhanced genetic improvement of the trait considered.