• Title/Summary/Keyword: dominance species

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Research on the Diversity of Intestinal Microbial Communities of Red tilefish (Branchiostegus japonicus) by 16S rDNA Sequence Analysis (16S rDNA 염기서열 분석에 의한 옥돔(Branchiostegus japonicus)의 장내미생물 군집의 다양성 조사)

  • Kim, Min-Seon;Lee, Seung-Jong;Heo, Moon-Soo
    • Journal of Life Science
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    • v.28 no.3
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    • pp.361-368
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    • 2018
  • This study investigated the diversity of communities of intestinal microorganisms, separated from the intestinal organs of Red tilefish (Branchiostegus japonicas), collected on the Jeju Coast. First, in the isolation of 1.5% BHIA, MA, TSA and R2A Agar on the medium, there were most colonies in 1.5% BHIA. The results of aerobic culture and anaerobic culture were $1.7{\times}10^6CFU/g^{-1}$ and $1.1{\times}10^5cfu/g^{-1}$, respectively, on average, and 147 pure colonies were separated in total. In 16S rDNA sequencing, there were 58 genera and 74 species, showing 95-100% similarity with the basic strain. They were divided broadly into 5 phyla, and as the main phyletic group, Proteobacteria phylum comprised 50% with 9 families, 35 genera and 35 species of Moraxellaceae, Rhodobacteraceae, Shewanellae, Halomondaceae, Enterobacteriaceae, Vibrionaceae, Hahellaceae, Pseudomonadaceae, and Erythrobacteraceae, with the highest index of dominance. Actinobacteria phylum comprised 24% with 8 families, 11 genera and 17 species of Microbacteriaceae, Intrasporangiaceae, Dietziaceae, Dermabacteraceae, Dermacoccaceae, Nocardiodaceae, Brevibacteriaceae and Propionobacteriacea; Firmicutes phylum, 16% with 6 families, 8 genera and 17 species of Bacillaceae, Staphylcoccaceae, Planococcaceae, Streptococcaceae, Paenibacillaceae and Clostridiaceae; Bacteroidetes phylum, 6% with 2 families, 3 genera and 4 species of Cyclobacteriaceae and Flavobacteriaceae; and Deinococcus-Thermus phylum, 4% with 1 family, 1 genus and 1 species of Deinococcaceae.

Ecological Study of Zooplankton Community at Dangdong Bay in Gyeongsangnamdo, Korea (당동만 동물플랑크톤 군집의 생태학적 연구)

  • Han, Hyoung-Sum;Park, Yong-Woo;Kim, Jong-Chun;Ma, Chae-Woo
    • Korean Journal of Environmental Biology
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    • v.33 no.2
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    • pp.240-247
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    • 2015
  • This study was carried out to provide the preliminary data for study of zooplankton community structures and coastal pelagic ecosystem by understanding the seasonal change of zooplankton community depending on environmental factors at Dangdong bay in Tongyeong city. In this study, the environmental factors and the change of zooplankton community were analyzed for 2008 to 2011. In the results, a total of 80 species of zooplankton was sampled with a mean density of $1,599inds.m^{-3}$. The dominant species changed seasonally, and the most dominant species was Acartia steueri in winter and spring, Penilia avirostris in summer, and Evadne nordmanni in autumn. The Canonical Correspondence Analysis was conducted between the major dominant species and environmental factors. And for the environmental factors that effect the zooplankton community, the high correlation was observed with the water temperature, COD, DO and T-N, though there was slight difference among species. Therefore, more various research and environmental study are necessary to understand of planktonic ecosystem because the zooplankton community is affected by the interaction of both physical and biological factors.

Investigation on Physical Habitat Condition and Fish Fauna in Dal Stream of Han River Basin (한강수계 달천의 어류상과 물리적 서식지 조건에 관한 연구)

  • Hur, Jun-Wook;Kang, Hyoeng-Sik;Jang, Min-Ho
    • Journal of Korean Society of Environmental Engineers
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    • v.33 no.8
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    • pp.564-571
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    • 2011
  • In order to establish fundamental data for stream restoration and environmental flow, we investigated fish fauna, community and physical habitat conditions in the Dal Stream of Han River Basin. Field monitoring including fish sampling was conducted from September 2008 to October 2009. A total number of fish caught in the 5 sites was 2,080 representing 9 families 35 species, and 19 species (54.3%) including Acheilognathus koreensis and Iksookimia koreensis were Korean endemic species during the study period. The most frequently found species in number was pale chub (Zacco platypus, 25.7%, n = 632) followed by Coreoleuciscus splendidus (18.0%, n = 375) and Z. koreanus (13.0%, n = 272). The lower reach of Dal Stream was more abundance of species, high diversity, evenness and richness, and lower dominance index than those of the upper reach. According to the dendrogram established at 0.63 level of similarity rate, sampling stations were divided into 2 groups. Most of upper streams in Korea consist of riffles and runs that are repeatedly followed by another one. However, stream channelization and leveling have caused reduction of habitat diversity. Therefore, it is necessary to make an effort on stream rehabilitation with evaluation of physical habitat condition by indicator species in order to maintain biodiversity and perform ecological restoration.

Seasonal Variations of Seaweed Community Structure at the Subtidal Zone of Bihwa on the East Coast of Korea (동해 비화 조하대 해조류 군집구조의 계절적 변화)

  • Kim, Young-Dae;Park, Mi-Seon;Yoo, Hyun-Il;Min, Byung-Hwa;Jin, Hyung-Joo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.45 no.3
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    • pp.262-270
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    • 2012
  • Seaweeds provide habitats in which marine animals can spawn and develop, and serve as a food supply for algaegrazing species such as sea urchins and abalone. Recently, seaweed species have disappeared from coastal ecosystems, leaving barren ground, defined as habitats that have lost their algae forests and where coralline algae containing calcium carbonate components have become encrusted on rocks. The biological causes of barren ground include grazing by herbivores and excessive seaweed harvest. The environmental harm caused by the spread of barren ground includes accelerated eutrophication following the reduction in seaweed, which plays an important role in oceanic purification. In the present study, we identified the relationships between various seaweed species and the occurrence of barren ground. Subtidal benthic macroalgal flora and community structure were observed seasonally on barren ground along vertical transects of rocky shores of Bihwa, Samchuck, and the east coast of Korea from February to November 2006. Fifty-eight seaweed species were identified, including 7 green, 15 brown, and 36 red algae species. There were between 6 and 28 species among seasons. Over the whole study period, average seaweed biomass (g wet wt $m^{-2}$) was 241.90 g, with a seasonal range of 25.26 to 760.34 g. Seaweed biomass declined with increasing seawater depth and ranged between 91.26 and 422.08 g. The vertical distribution of algae was characterized by Undaria pinnatifida and Sargassum honeri at 5 m, S. honeri and U. pinnatifida at 10 m, and U. pinnatifida and Agarum clathratum at 15 m depth. Seasonal patterns in community indices were not found. Community indices showed different patterns along vertical shoreline gradients; the dominance index increased but the richness, evenness, and diversity indices decreased with seawater depth. Sea urchin density was 8 to 24 individ. $m^{-2}$ in Bihwa. These urchin populations had significantly aggregated spatial patterns and recurrent destructive grazing appeared to be occurring.

The Influence of Sediment Control Dam Dredging on Benthic Macroinvertebrate Communities of Mountain Stream (사방댐 준설이 저서성 대형무척추동물 군집에 미치는 영향)

  • Kim, Bong Sung;Lee, Chang Woo;Seo, Eul Won;Lee, Jong Eun
    • Journal of Korean Society of Forest Science
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    • v.101 no.3
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    • pp.454-460
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    • 2012
  • This study was conducted for determining the influence of Sediment Control Dam dredging on benthic macroinvertebrate communities in mountain stream of Gyeongsangbuk-do. The sediment control dams were surveyed before and after dredging from mountain streams of Yecheon, Yeongju and Bonghwa in Northern part of Gyeongsangbuk-do. Sampling was taken at upper and down from 3 experimental sites and 2 control sites during May to August 2011. The identified species before dredging were 56 belonged to 31 families, 11 orders, 6 classes and 4 phyla, but after dredging it has decreased to 51 species belonged to 27 families, 10 orders, 5 classes and 4 phyla. The microhabitat damage of benthic macroinvertebrates occurred at experimental sites after dredging of sediment control dams led to reduction of the number of species and individuals. Especially, upper stream of experimental sites showed the reduction of an average of 38% species. In general, species diversity indices and species richness indices decreased after dredging; however, dominance indices increased at experimental sites. In the upper stream of experimental sites, the microhabitat damaged and became pool due to dredging. Also, velocity of flow decreased and the river bed became simply due to the sedimentary matter being finer than sand and silt. As a result, composition of functional feeding groups and functional feeding groups were relatively simpler at upper stream and the degree of community differences was greater between upper and down stream. Also, Chironomidae spp., Ephemeridae spp., and Gomphidae spp. to prefer where slow velocity of flow and lentic increased in a greater rate, and the EPT/C index to indicate the balance of the community decreased.

An Ecological Feature of Benthic Macrofauna during Summer 1997 in Namdaechon Estuary, Yangyang, Korea (양양 남대천 하구역의 여름철 대형저서동물 군집의 생태학적 특성)

  • HONG Jae-Sang;SEO In-Soo;LEE Chang-Gun;YOON Sang-Pil;JUNG Rae-Hong
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.33 no.3
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    • pp.230-237
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    • 2000
  • An ecological study of the benthic macrofauna was carried out using a modified van Veen grab in September 1997, in Namdaechon estuary, Yangyang, Korea. A total of 17 macro-invertebrates was collected and examined from eleven stations in the study area, including 3,795 individuals and 738.63 g wet weight. Arthropods, annelids and molluscs were most abundant and occupied more than $95{\%}$ of the total number of species, individuals and biomass. Namdaechon estuary in Yangyang was very poor in macrobenthic biodiversity, and numerically dominated and characterized by the polychaetes Heteromastus filiformis, Hediste japonica, Eteone longa, an unidentified oligochaete Oligochaeta sp., a corbulid bivalve Corbicula japonica, and an estuarine isopod Cyathura higoensis. Species composition, species dominance, density, and species evenness were compared among stations. The macrofaunal azoic zone appeared in the bottom of 7 m in depth nearby the artificial bank to catch the salmons to return to the livers for spawning. It probably resulted from the oxygen depletion following strong stratification in summer, which can cause major effect on the ecological conditions and then finally kill bottom macro-invertebrates in this area. Moreover, some opportunistic species thrived in nearby another station and this is of vital importance in terms of the ecological succession in a benthic polluted area.

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Regional Diversity Pattern of Spring Moths and Climatic Effects on Moth Catches (봄 출현 나방의 지역별 종 다양성 양상과 출현에 미치는 기후영향 연구)

  • Noh, Dong-Ho;Kim, Sung-Soo;Choi, Sei-Woong
    • Korean Journal of Environmental Biology
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    • v.34 no.1
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    • pp.30-36
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    • 2016
  • We investigated the diversity pattern of spring moths across two regions of South Korea, Yongin city (middle part) and Muan gun (southern part) and the effects of climatic variables on moth species richness and abundance. Moths were weekly collected using UV light trap in April from 2013 to 2015. Climatic factors included growth degree day with base temperature 8 (GDD8), average temperature, precipitation, duration of sunshine, wind speed, and snow cover. The climatic effects on moth species richness and abundance were analyzed by short (0~3 weeks before collecting) and long (4~12 weeks before collecting) time periods, respectively. The diversity of spring moths showed the similar pattern of species composition at family level. However the dominant family differed depending on the region: Geometridae at middle part and Noctuidae at southern part. In addition the dominant species of Noctuidae occurred early in April and that of Geometridae moths occurred later in April. Three short-term climatic factors, GDD8, duration of sunshine, and precipitation one week before collecting were significant on moth species richness and abundance, while only one long-term climatic factor, temperature four weeks before collecting was significantly affected on moth species richness. We found that both Geometridae and Noctuidae were dominant in spring moth fauna across South Korea and they were different in the dominance and flying time in April. The occurrences of spring moths were largely affected by warmness and precipitation. The current global warming could affect the occurrence of spring moths and this should be monitored consistently.

Occurrence of Weed Flora in Codonopsis lanceolata Upland Fields of Gangwon-Hoengseong and Jeju Areas in Korea (강원 횡성 및 제주지역 더덕밭 잡초발생양상)

  • Song, Hee Geun;Kim, Chang-Seok;Lee, Jeongran;Seo, Hyun-A;Choi, Kyung Mi;Lee, In-Yong
    • Weed & Turfgrass Science
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    • v.4 no.3
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    • pp.176-187
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    • 2015
  • The weed flora in the Codonopsis lanceolata upland fields were surveyed in Hoengseong and Jeju in May, August, and October of 2014. The objectives of this study were to use the survey data for establishing weed control methods and to bring awareness of possible problematic weeds occurred in C. lanceolata upland fields in Korea. Altogether 207 weed species of 47 families were identified, of which 87 were annual, 47 species were biennial and 73 were perennial. Based on the morphological characteristic of the leaves, 182 species were broad leaves, 18 species were grasses, and 7 species were sedges. The dominance was highest in the Artemisia princeps followed by Digitaria ciliaris, Commelina communis, Persicaria longiseta and Echinochloa crus-galli etc. Fifty-nine species were exotic weeds with 29% of a total presence, of which Erigeron annuus was highest, followed by Crassocephalum crepidioides, Bidens frondosa, Hypochaeris radicata etc. In the PCA plot, weeds presented in the C. lanceolata upland fields of Hoengseong were divided into three groups, E. annuus, Sigesbeckia pubescence and C. communis communities and those of Jeju were divided into four groups, C. crepidioides-Cyperus iria, Spergula arvensis, Poa annua and Youngia japonica communities.

Temporal Changes of Community Structure of Benthic Macroinvertebrates in the North Branch of Han River System, Korea (북한강 하류 지류에서의 저서 대형무척추동물의 계절적 군집구조)

  • Chung, Pyung-Rim;Aw, Sung-Joon;Kim, Jae-Jin;Younghun Jung;Park, Jun-Kil
    • Korean Journal of Environmental Biology
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    • v.17 no.2
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    • pp.159-168
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    • 1999
  • The ophemeropterans such as Epeorus pellucidus, Uracanthella rufa and Drunella uculea were dominated in station 1. It was generally showed the stable aquatic communities with low dominance index values throughout the year in station 2. The first dominant species in station 3 were all mayflies with the average DI value of 0.38. The first dominant species of Uracanthella rufa known as relatively tolerant species in station 4. A crustacean species Gammarus spp. have frequently occurred as the 1st or 2nd dominant species in station 5. Limnodrilus socialis, and Chironomus spp. were dominated in stations 6 and 7 Station 1, 2 and 3 were classified as oligosaprobic status according to their average diversity index values ranging from 3.46 to 3.52. Station 7 showed $\alpha$-mesosaprobic water condition with the overall average diversity value of 1.26. In general, the equitability and species richness values in the same sampling areas had close relations with their diversity values. The dendrogram drawn by dissimilarity values among 7 sampling sites indicates that the macrobenthic communities were divided into 3 groups: stations 1, 2, 3 and 4; stations 6 and 7; and station 5 alone.

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Vegetation Structure of Some Abandoned Coal Mine Lands in Taebaek Area, Gangwon Province (강원도 태백지역 폐탄광지의 식생구조에 관한 연구)

  • Min J. G.;Lee J. H.;Woo S. Y.;Kim J. K.;Moon H. S.
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.6 no.4
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    • pp.256-264
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    • 2004
  • Vegetation structure was investigated to provide basic information on revegetation of abandoned coal mine lands in Borim, Sungwon, Hyeopjeong, Daedong and at a control site in Taebaek. The upper layer of the control site consists of 7 species and the Importance Value was highest for Pinus densijlora, but there were no species in the four abandoned coal mines. The number of dominant species in the middle layer of each coal mine site was 2 for Borim, 2 for Sungwon, 3 for Hyeopjeong and 2 for Daedong. In the case of the lower layer in Borim, Sungwon, Hyeopjeong and Daedong, there were 12, 14, 9 and 8 species, respectively. The lower level importance values were highest for Pinus densiflora in Borim, for Amorpha fruticosa in Sungwon and for Rubus crataegifolius in the Hyeopjeong and Daedong coal mines. Weigela subsessilis, R. crataegifolius, P. densiflora, Betula platyphylla var. japonica, Stephanandra incisa, Lespedeza crytobotrya and A. fruticosa appeared in the lower layers of abandoned coal mines. Species diversity of the lower and the herbaceous layers ranged from 0.800 to 0.952 and 0.699 to 0.907 in abandoned coal mines. Evenness and dominance in all abandoned coal mines ranged from 0.840 to 0.949 and 0.051 to 0.160.