• 제목/요약/키워드: deviance information criterion

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Bayes factors for accelerated life testing models

  • Smit, Neill;Raubenheimer, Lizanne
    • Communications for Statistical Applications and Methods
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    • 제29권5호
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    • pp.513-532
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    • 2022
  • In this paper, the use of Bayes factors and the deviance information criterion for model selection are compared in a Bayesian accelerated life testing setup. In Bayesian accelerated life testing, the most used tool for model comparison is the deviance information criterion. An alternative and more formal approach is to use Bayes factors to compare models. However, Bayesian accelerated life testing models with more than one stressor often have mathematically intractable posterior distributions and Markov chain Monte Carlo methods are employed to obtain posterior samples to base inference on. The computation of the marginal likelihood is challenging when working with such complex models. In this paper, methods for approximating the marginal likelihood and the application thereof in the accelerated life testing paradigm are explored for dual-stress models. A simulation study is also included, where Bayes factors using the different approximation methods and the deviance information are compared.

베이지안 로지스틱 회귀모형에서의 추론에 대한 연구 (Inferential Problems in Bayesian Logistic Regression Models)

  • 황진수;강성찬
    • 응용통계연구
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    • 제24권6호
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    • pp.1149-1160
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    • 2011
  • 기존의 frequentist 추론에 비해 Bayesian 추론에서의 가설 검정 및 모형 선택 문제는 학자들 간에 일치된 견해를 보이지 못하고 있으며 아직도 논란이 되는 것들이 많다. Bayesian 추론에서 가설 검정 및 모형 선택의 기준으로 널리 쓰이는 Bayes factor는 이해하기 쉬우나 여러 경우에 구하기 어려운 단점이 존재한다. 그 외에 다른 기준으로 Spiegelhalter 등 (2002)가 제시한 DIC(Deviance Information Criterion)과 frequentist 추론에서의 P-value에 대비되는 Bayesian P-value가 있다. 본 논문에서는 Swiss banknote 자료를 Bayesian 로지스틱 회귀모형으로 분석하고 관련 기준들을 구하여 각 기준들이 일관성 있는 결론을 보이는지 확인하고자 한다.

Bayesian inference for an ordered multiple linear regression with skew normal errors

  • Jeong, Jeongmun;Chung, Younshik
    • Communications for Statistical Applications and Methods
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    • 제27권2호
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    • pp.189-199
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    • 2020
  • This paper studies a Bayesian ordered multiple linear regression model with skew normal error. It is reasonable that the kind of inherent information available in an applied regression requires some constraints on the coefficients to be estimated. In addition, the assumption of normality of the errors is sometimes not appropriate in the real data. Therefore, to explain such situations more flexibly, we use the skew-normal distribution given by Sahu et al. (The Canadian Journal of Statistics, 31, 129-150, 2003) for error-terms including normal distribution. For Bayesian methodology, the Markov chain Monte Carlo method is employed to resolve complicated integration problems. Also, under the improper priors, the propriety of the associated posterior density is shown. Our Bayesian proposed model is applied to NZAPB's apple data. For model comparison between the skew normal error model and the normal error model, we use the Bayes factor and deviance information criterion given by Spiegelhalter et al. (Journal of the Royal Statistical Society Series B (Statistical Methodology), 64, 583-639, 2002). We also consider the problem of detecting an influential point concerning skewness using Bayes factors. Finally, concluding remarks are discussed.

비정규 시계열 자료의 회귀모형 연구 (Generalized Linear Model with Time Series Data)

  • 최윤하;이성임;이상열
    • 응용통계연구
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    • 제16권2호
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    • pp.365-376
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    • 2003
  • 본 연구에서는 비정규 시계열 자료에 관한 다양한 회귀모형을 고찰하고, 이들 모형의 선택 기준에 관하여 연구해 보았다. 모형 선택의 기준으로는 AIC (Akaike information criterion), BIC (Baysian information criterion) 그리고 우도비 검정을 확장 적용하였다. 또한, 실제의 Polio 자료분석을 통해 이를 적용해보았다.

Evaluation of Related Risk Factors in Number of Musculoskeletal Disorders Among Carpet Weavers in Iran

  • Karimi, Nasim;Moghimbeigi, Abbas;Motamedzade, Majid;Roshanaei, Ghodratollah
    • Safety and Health at Work
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    • 제7권4호
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    • pp.322-325
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    • 2016
  • Background: Musculoskeletal disorders (MSDs) are a common problem among carpet weavers. This study was undertaken to introduce affecting personal and occupational factors in developing the number of MSDs among carpet weavers. Methods: A cross-sectional study was performed among 862 weavers in seven towns with regard to workhouse location in urban or rural regions. Data were collected by using questionnaires that contain personal, workplace, and information tools and the modified Nordic MSDs questionnaire. Statistical analysis was performed by applying Poisson and negative binomial mixed models using a full Bayesian hierarchical approach. The deviance information criterion was used for comparison between models and model selection. Results: The majority of weavers (72%) were female and carpet weaving was the main job of 85.2% of workers. The negative binomial mixed model with lowest deviance information criterion was selected as the best model. The criteria showed the convergence of chains. Based on 95% Bayesian credible interval, the main job and weaving type variables statistically affected the number of MSDs, but variables age, sex, weaving comb, work experience, and carpet weaving looms were not significant. Conclusion: According to the results of this study, it can be concluded that occupational factors are associated with the number of MSDs developing among carpet weavers. Thus, using standard tools and decreasing hours of work per day can reduce frequency of MSDs among carpet weavers.

Sensitivity analysis in Bayesian nonignorable selection model for binary responses

  • Choi, Seong Mi;Kim, Dal Ho
    • Journal of the Korean Data and Information Science Society
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    • 제25권1호
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    • pp.187-194
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    • 2014
  • We consider a Bayesian nonignorable selection model to accommodate the selection bias. Markov chain Monte Carlo methods is known to be very useful to fit the nonignorable selection model. However, sensitivity to prior assumptions on parameters for selection mechanism is a potential problem. To quantify the sensitivity to prior assumption, the deviance information criterion and the conditional predictive ordinate are used to compare the goodness-of-fit under two different prior specifications. It turns out that the 'MLE' prior gives better fit than the 'uniform' prior in viewpoints of goodness-of-fit measures.

Modeling pediatric tumor risks in Florida with conditional autoregressive structures and identifying hot-spots

  • Kim, Bit;Lim, Chae Young
    • Journal of the Korean Data and Information Science Society
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    • 제27권5호
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    • pp.1225-1239
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    • 2016
  • We investigate pediatric tumor incidence data collected by the Florida Association for Pediatric Tumor program using various models commonly used in disease mapping analysis. Particularly, we consider Poisson normal models with various conditional autoregressive structure for spatial dependence, a zero-in ated component to capture excess zero counts and a spatio-temporal model to capture spatial and temporal dependence, together. We found that intrinsic conditional autoregressive model provides the smallest Deviance Information Criterion (DIC) among the models when only spatial dependence is considered. On the other hand, adding an autoregressive structure over time decreases DIC over the model without time dependence component. We adopt weighted ranks squared error loss to identify high risk regions which provides similar results with other researchers who have worked on the same data set (e.g. Zhang et al., 2014; Wang and Rodriguez, 2014). Our results, thus, provide additional statistical support on those identied high risk regions discovered by the other researchers.

Grid-based Gaussian process models for longitudinal genetic data

  • Chung, Wonil
    • Communications for Statistical Applications and Methods
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    • 제29권1호
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    • pp.65-83
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    • 2022
  • Although various statistical methods have been developed to map time-dependent genetic factors, most identified genetic variants can explain only a small portion of the estimated genetic variation in longitudinal traits. Gene-gene and gene-time/environment interactions are known to be important putative sources of the missing heritability. However, mapping epistatic gene-gene interactions is extremely difficult due to the very large parameter spaces for models containing such interactions. In this paper, we develop a Gaussian process (GP) based nonparametric Bayesian variable selection method for longitudinal data. It maps multiple genetic markers without restricting to pairwise interactions. Rather than modeling each main and interaction term explicitly, the GP model measures the importance of each marker, regardless of whether it is mostly due to a main effect or some interaction effect(s), via an unspecified function. To improve the flexibility of the GP model, we propose a novel grid-based method for the within-subject dependence structure. The proposed method can accurately approximate complex covariance structures. The dimension of the covariance matrix depends only on the number of fixed grid points although each subject may have different numbers of measurements at different time points. The deviance information criterion (DIC) and the Bayesian predictive information criterion (BPIC) are proposed for selecting an optimal number of grid points. To efficiently draw posterior samples, we combine a hybrid Monte Carlo method with a partially collapsed Gibbs (PCG) sampler. We apply the proposed GP model to a mouse dataset on age-related body weight.

Bayesian Analysis of Binary Non-homogeneous Markov Chain with Two Different Time Dependent Structures

  • Sung, Min-Je
    • Management Science and Financial Engineering
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    • 제12권2호
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    • pp.19-35
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    • 2006
  • We use the hierarchical Bayesian approach to describe the transition probabilities of a binary nonhomogeneous Markov chain. The Markov chain is used for describing the transition behavior of emotionally disturbed children in a treatment program. The effects of covariates on transition probabilities are assessed using a logit link function. To describe the time evolution of transition probabilities, we consider two modeling strategies. The first strategy is based on the concept of exchangeabiligy, whereas the second one is based on a first order Markov property. The deviance information criterion (DIC) measure is used to compare models with two different time dependent structures. The inferences are made using the Markov chain Monte Carlo technique. The developed methodology is applied to some real data.

t-링크를 갖는 마코프 이항 회귀 모형을 이용한 인도네시아 어린이 종단 자료에 대한 베이지안 분석 (Bayesian inference of longitudinal Markov binary regression models with t-link function)

  • 심보현;정윤식
    • 응용통계연구
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    • 제33권1호
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    • pp.47-59
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    • 2020
  • 본 논문에서는 마코프 이항 회귀 모형의 시차가 알려져 있거나 그렇지 않은 경우일 때, t-링크 함수를 갖는 종단적 마코프 이항 회귀 모형을 제시한다. 일반적으로, 이항 회귀 모형에서는 로직 모형이나 프로빗 모형이 주로 사용된다. t-링크 함수는 t 분포가 자유도가 커질수록 정규분포로 근사하기 때문에 프로빗 모형을 대신 더 많은 유연성을 위해 사용될 수 있다. 게다가 마코프 회귀모형은 종단 자료에 대해 사용될 수 있다. 우리는 마코프 회귀 모형의 시차를 결정하기 위해 베이지안 방법을 제시하고자 한다. 특히, 각 모델의 차수에 대해 알고 있는 경우에는 DIC를 기준으로 모델 비교를 실시하였다. 모델의 차수에 대해 모르는 경우에는 가능한 모델들의 사후 확률을 이용하였다. 복잡한 베이지안 계산을 해결하기 위하여 Albert와 Chib (1993), Kuo와 Mallick (1998)과 Erkanli 등 (2001)의 방법을 이용하여 모델을 재설정하였다. 제안하는 방법은 시뮬레이션 데이터와 Somer 등 (1984)에 의해 조사된 인도네시아 어린이 종단 데이터에 적용했다. 마코프 이항 회귀모형의 순서에 대해서 아는 경우와 모르는 경우를 각각 가정하여 최적의 모델을 알아보기 위해 MCMC 방법을 사용하였다. 또한, 매트로폴리스 해스팅 알고리즘의 수렴성을 점검하기 위해 Gelman과 Rubin의 진단을 이용했다.