• Title/Summary/Keyword: cytoplasmic

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Tail-to-Head Tandem Duplication and Simple Repetitive Sequences of the Cytoplasmic Actin Genes in Greenling Hexagrammos otakii (Teleostei; Scorpaeniformes)

  • Lee, Sang-Yoon;Kim, Dong-Soo;Nam, Yoon-Kwon
    • Fisheries and Aquatic Sciences
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    • v.14 no.4
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    • pp.303-310
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    • 2011
  • We characterized a cytoplasmic actin gene locus in greenling Hexagrammos otakii (Scorpaeniformes). Genomic clones isolated from the greenling DNA library contained two homologous cytoplasmic actin gene copies (HObact2.1 and HObact2.2) in a tail-to-head orientation. Their gene structure is characterized by six translated exons and one non-translated exon. Exon-intron organization and the nucleotide sequences of the two actin gene isoforms are very similar. However, only the HObact2.1 isoform contains microsatellite-like, dinucleotide repeats in the 5'-flanking region (named HOms2002) and intron 1 following the non-translated exon 1 (named HOms769). One microsatellite locus (HOms769) was highly polymorphic while the other (HOms2002) was not. Based on bioinformatic analysis, different transcription factor binding motifs are related to stress and immune responses in the two actin isoforms. Semiquantitative and real-time reverse transcription-PCR assays showed that both isoform transcripts were detectable ubiquitously in all the tissues examined. However, the basal expression levels of each isoform varied across tissues. Overall, the two isoforms showed a similar, but not identical, expression pattern. Our data suggest that the cytoplasmic actin genes may be the result of a recent duplication event in the greenling genome, which has not experienced significant subfunctionalization in their housekeeping roles.

A Cytoplasmic Polyhedrosis Virus Isolated from the Pine Processionary Caterpillar, Thaumetopoea pityocampa

  • Ince, Ikbal Agah;Demir, Ismail;Demirbag, Zihni;Nalcacioglu, Remziye
    • Journal of Microbiology and Biotechnology
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    • v.17 no.4
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    • pp.632-637
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    • 2007
  • A cytoplasmic polyhedrosis virus (CPV) was isolated from the larvae of Thaumetopoea pityocampa and shown to cause an infection of midgut cells. This viral infection revealed several important diagnostic symptoms, including discoloration of the posterior midgut, reduced feeding, and extended development time of the larvae. The virus infection is lethal to Thaumetopoea pityocampa, and with the increasing doses kills the larvae within 4-5 days post infection. Electron microscopy studies showed typical cytoplasmic polyhedral inclusion bodies that are icosahedral, and ranged from 2.4 to $5.3{\mu}m$ in diameter. Electrophoretic analysis of the RNA genome showed that the virus has a genome composed of 10 equimolar RNA segments with the sizes of 3,907, 3,716, 3,628, 3,249, 2,726, 1,914, 1,815, 1,256, 1,058, and 899 bp, respectively. Based on morphology and nucleic acid analysis, this virus was named Thaumetopoea pityocampa cytoplasmic polyhedrosis virus (TpCPV), and belongs to the genus Cypovirus, family Reoviridae.

Antimutagenic Effect of Bacillus natto Isolated from Natto

  • Yun, Soon-Il
    • Journal of Applied Biological Chemistry
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    • v.48 no.3
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    • pp.133-137
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    • 2005
  • In vitro antimutagenicity of Bacillus natto islolated from Natto, Japanese traditional fermented food, was investigated using umu-test. Mutagenicity of S9-activated metabolites of Trp-P-2 and IQ for Salmonella typhimurium TA 1535/pSK1002 was remarkably inhibited by addition of bacterial cells and their cytoplasmic fraction. Desmutagenicity by cytoplasmic fraction increased with increasing concentration of the fraction. Bioantimutagenic effect of cytoplasm on Salmonella typhimurium SD-100 did not show bioantimutagenic activity against mutated bacterial cells induced by Trp-P-2. Cytoplasmic fraction exhibited 17% bioantimutagenicity due to desmutation caused by IQ.

Characteristics and the Utilization of Cytoplasmic Male Sterility in Burley Tobacco ( Nicotiana tabacum L. CV Burley ) (Burley (Nicotiana tabacum L. CV Burley)종의 세포질적 웅성불임계통의 특성과 이용)

  • 이승철;정윤화;이상하
    • Journal of the Korean Society of Tobacco Science
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    • v.1 no.1
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    • pp.46-50
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    • 1979
  • Four cytoplasmic male-sterile lines of burley tobacco (Nicotiana tabacum L. ) and their male- fertile counterparts were evaluated for their characteristics in replicated field trials. Cytoplasmic male -sterile lines were comparable to the male- fertile varieties for agronomic and chemical traits and these suggest that the cytoplasmic male - sterility can be used in the production of hybrid seed without loss of vigour or undesirable changes On other characteristics.

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Studies on the Interaction of Glut4 and Cytoskeletal Protein (Glut4와 Cytoskeletal Protein의 상호작용에 관한 연구)

  • 김미영;이경림
    • Biomolecules & Therapeutics
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    • v.4 no.4
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    • pp.398-401
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    • 1996
  • The glucose transporters found in the plasma membrane of all animal cells are known to have 12 putative transmembrane domains. Among 7 cytoplasmic loops, the fourth loop is the largest one. Since previous studies showed that cofilin, an actin-modulating protein, was found to interact with the largest cytoplasmic loop of (Na, K)ATPase, we tested if cofilin interacts with the largest cytoplasmic loop of Glut4. We demonstrated by the two-hybrid system that the largest cytoplasmic loop of Glut4 did not show any interaction with cofilin, suggesting that cofilin is not required for the membrane targeting process of other membrane proteins but only for a P-type ATPase.

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Ultrastructural Changes in Midgut of CPV infected Tropical Tasar Silkworm, Antheraea mylitta (D) (Lepidoptera : Saturniidae)

  • Barsagade, Deepak Deewaji;Kadwey, Mangala Nimbaji
    • International Journal of Industrial Entomology and Biomaterials
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    • v.21 no.1
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    • pp.117-125
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    • 2010
  • The tropical tasar silkworms, Antheraea mylitta (D) produce famous silk 'Kosa' in central part of India. Due to outdoor rearing it became susceptible to viral infection including cytoplasmic polyhedrosis virus (CPV). The common mode of entry of cytoplasmic polyhedrosis virus is per os and cause gresserie disease to the larvae. Histopathological studies elucidated the insect CPV virus produces infective polyhedral inclusion bodies (PIBs) in the midgut cell cytoplasm of virus infected fifth instar larvae. The PIBs multiply enormously in the cytoplasm without invading the nucleus. Ultrastructural studies confirmed the pathological effects of CPV on in midgut cell cytoplasm. The multiplication of polyhedral inclusion bodies took place into the vacuoles and form virogenic stromata in the cytoplasm of cells. However, the encapsulations of polyhedral inclusion bodies into the polyhedrin protein occurred and polyhedra were released into the lumen. At the late stage of infection, cells showed the regressed cytoplasmic organelles with large vacuoles and elongated mitochondria. Hence, the horizontal transmission of CPV causing the midgut cells disintegration in the tasar silkworm, Antheraea mylitta (D) confirmed during infection.

Depletion of Cytoplasmic Tail of UL18 Enhances and Stabilizes the Surface Expression of UL18

  • Kim, Jung-Sik;Kim, Bon-Gi;Yoon, Il-Hee;Kim, Sang-Joon;Park, Chung-Gyu
    • IMMUNE NETWORK
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    • v.8 no.4
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    • pp.130-136
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    • 2008
  • Background: Human cytomegalovirus UL18, a MHC class I homologue, has been considered a natural killer (NK) cell decoy. It ligates LIR-1/ILT2 (CD85j), an NK inhibitory receptor, to prevent lysis of infected target cells. However, precise role of UL18 to NK cell cytotoxicity is yet elusive. Difficulty in clarifying the function of UL18 lies in complication in detecting UL18 mainly due to low level expression of UL18 on the surface and gradual loss of its expression. Methods: To overcome this hurdle, cDNA of cytoplasmic tail-less UL18 was constructed and expressed in swine endothelial cell (SEC). The expression level and its stability in the cell surface were monitored with FACS analysis. Results: Surface expression of UL18 is up-regulated by removing cytoplasmic tail portion from UL18F (a full sequence of UL18). SECs transfected with a cDNA of UL18CY (a cytoplasmic tail-less UL18) stably expressed UL18 molecule on the surface without gradual loss of its expression during 6 week continuous cultures. In the NK cytotoxicity assay, UL18 functions either inhibiting or activating NK cell cytotoxicity according to the source of NK cells. We found that there is individual susceptibility in determining whether the engagement of NK cell and UL18 results in overall inhibiting or activating NK cell cytotoxicity. Conclusion: In this study, we found that cytoplasmic tail is closely related to the regulatory function for controlling surface expression of UL18. Furthermore, by constructing stable cell line in which UL18 expression is up-regulated and stable, we provided a useful tool to clarify exact functions of UL18 on various immune cells having ILT2 receptor.

Conservation of cis-Regulatory Element Controlling Timely Translation in the 3'-UTR of Selected Mammalian Maternal Transcripts

  • Lee, Hyun-Joo;Lim, Yoon-Ki;Chang, Sang-Ho;Min, Kwan-Sik;Han, Ching-Tack;Hwang, Sue-Yun
    • Genomics & Informatics
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    • v.5 no.4
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    • pp.174-178
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    • 2007
  • The earliest stages of mammalian embryogenesis are governed by the activity of maternally inherited transcripts and proteins. Cytoplasmic polyadenylation of selected maternal mRNA has been reported to be a major control mechanism of delayed translation during preimplantation embryogenesis in mice. The presence of cis-elements required for cytoplasmic polyadenylation (e.g., CPE) can serve as a useful tag in the screening of maternal genes partaking in key functions in the transcriptionally dormant egg and early embryo. However, due to its relative simplicity, UA-rich sequences satisfying the canonical rule of known CPE consensus sequences are often found in the 3'-UTR of maternal transcripts that do not actually undergo cytoplasmic polyadenylation. In this study, we developed a method to confirm the validity of candidate CPE sequences in a given gene by a multiplex comparison of 3'-UTR sequences between mammalian homologs. We found that genes undergoing cytoplasmic polyadenylation tend to create a conserved block around the CPE, while CPE-like sequences in the 3'-UTR of genes lacking cytoplasmic polyadenylation do not exhibit such conservation between species. Through this cross-species comparison, we also identified an alternative CPE in the 3'-UTR of tissue-type plasminogen activator (tPA), which is more likely to serve as a functional element. We suggest that verification of CPEs based on sequence conservation can provide a convenient tool for mass screening of factors governing the earliest processes of mammalian embryogenesis.

Nutritive Value and Functional Properties on Fractionated Chloroplastic and Cytoplasmic Protein from Leaves of Acacia(Robinia pseudo-acacia Line) (아카시아 잎에서 분획(分劃)한 엽록체단백질(葉綠體蛋白質)과 세포질단백질(細胞質蛋白質)의 영양가(榮養價) 및 기능적(機能的) 성질(性質))

  • Kim, Jong-Kyu;Kang, Kap-Suk;Ko, Yung-Du
    • Korean Journal of Food Science and Technology
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    • v.15 no.4
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    • pp.321-325
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    • 1983
  • This study was carried out to investigate the nutritive value and functional proterties of chloroplastic protein and cytoplasmic protein which are a leaf protein concentrates of acacia. The results obtained are as follows; 1. The limited amino acids of chloroplastic protein and cytoplasmic protein in acacia leaf were methionine & tryptophan in both cases. 2. Digestibilities of chloroplastic protein and cytoplasmic protein were 72.59% and 60.24%, respectively. 3. Bulk density, water absorption, emulsifying capacity and emulsion stability of the chloroplastic protein and cytoplasmic protein were not greatly different from those of milk casein, but water solubilities of those were lower than that of milk casein. 4. Fat absorption of the cytoplasmic protein was similar to that of milk casein, but that of the chloroplastic protein was lower than that of milk casein.

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Anastomosis Types and Hyphal Interactions among Different Location and Field Isolates of Rhizoctonia solani AG-1(IA), R. oryzae and R. oryzae-sativae (Rhizoctonia solani AG-1(IA), R. oryzae, R. oryzae-sativae의 다른 지역(地域) 및 포장분리(圃場分離) 균주(菌株)들간의 균사융합형(菌絲融合型)과 균사상호작용(菌絲相互作用))

  • Kim, Wan-Gyu
    • The Korean Journal of Mycology
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    • v.21 no.3
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    • pp.188-194
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    • 1993
  • Anastomosis types and hyphal interactions in culture among different location and field isolates of Rhizoctonia solani AG-1(IA), R. oryzae and R. oryzae-sativae were examined. In the pairings of R. solani AG-1(IA) isolates, cytoplasmic fusion only occurred in the self-anastomoses, and non-cytoplasmic fusion occurred in the other combinations. In the pairings of R. oryzae isolates, cytoplasmic fusion occurred in six combinations between different location isolates and in two combinations between different field isolates from the same locations as well as in the self-anastomoses. In that case, four isolates of the fungus reciprocally made the cytoplasmic fusion. In the pairings of R. oryzae-sativae isolates, only non-cytoplasmic fusion occurred among the different location and field isolates, in which cytoplasmic fusion also occurred in the self-anastomoses. When non-cytoplasmic fusion isolates(NCFIs) of R. solani AG-1(IA) were opposed on PDA, a killing zone developed between the NCFls paired after incubation. The killing zone also developed between the NCFls of R. oryzae paired. No killing zone developed between the cytoplasmic fusion isolates(CFIs) of R. oryzae, in which mycelia of the CFIs intermingled with each other without formation of any demarcation line. An entangled zone instead of the killing zone developed between the NCFIs of R. oryzae-sativae.

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