• Title/Summary/Keyword: cytochrome oxidase subunit I

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DNA Barcoding of Scolelepis (Scolelepis) sagittaria (Annelida, Spionidae) in Korea, with a Morphological Variability of the Species

  • Lee, Geon Hyeok;Yoon, Seong Myeong;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.38 no.3
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    • pp.144-147
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    • 2022
  • The polychaete Scolelepis (Scolelepis) sagittaria was originally described from Japanese waters and subsequently reported from Korean waters. In this study, we determined for the first time the mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA (16S rDNA), and nuclear 18S ribosomal DNA (18S rDNA) sequences of Korean specimens of S. (S.) sagittaria. We also assessed intraspecific variation in the shape of the prostomium of this species based on an examination of 247 individuals. All materials were collected from intertidal sandy beaches of the Korea Strait. The molecular data and morphological observations reported herein will contribute to gaining a better understanding of the taxonomic relationships among members of the genus Scolelepis.

New Records of Four Feather Mites (Acariformes: Astigmata) from Waders (Charadriiformes: Scolopacidae) in Korea

  • Han, Yeong-Deok;Mironov, Sergey V.;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.38 no.3
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    • pp.130-139
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    • 2022
  • Four feather mites, Dichobrephosceles actitidis(Canestrini, 1878)(Alloptidae), Limosilichus limosae Vasyukova and Mironov, 1986, L. numeni Vasyukova and Mironov, 1986 (Syringobiidae), and Pomeranzevia numenii (Canestrini, 1878) (Avenzoariidae), have been reported in Korea for the first time. Specimens of D. actitidis and L. limosae were obtained from the common sandpiper, Actitis hypoleucos (Linnaeus, 1758), and the black-tailed godwit, Limosa limosa (Linnaeus, 1758), respectively, while L. numeni and P. numenii were collected from the Eurasian whimbrel, Numenius phaeopus (Linnaeus, 1766). The genera Dichobrephosceles Peterson and Atyeo, 1968, Limosilichus Vasyukova and Mironov, 1986, and Pomeranzevia Dubinin, 1951 are also new records for the fauna of Korea. This paper provides morphological descriptions, illustrations, and partial sequences of mitochondrial cytochrome c oxidase subunit I(COI) for all the recorded species based on the specimens collected in Korea.

A New Report of Prionospio kirrae (Annelida: Spionidae) from Korea

  • Lee, Geon Hyeok;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.38 no.2
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    • pp.91-97
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    • 2022
  • Spionid polychaete Prionospio kirrae Wilson, 1990 is newly reported from the Yellow Sea in Korea. This species is characterized by four pairs of branchiae, which are apinnate on chaetigers 2-4 and pinnate on chaetiger 5, a caruncle extending to the posterior end of chaetiger 1, the presence of a distinctly high dorsal crest on chaetiger 11, and the presence of tridentate hooded hooks with rounded apical teeth. Sequences of partial mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA(16S rDNA), and the nuclear 18S ribosomal DNA(18S rDNA) of the species are determined from Korean specimens.

Four New Records of Monogonont Rotifers (Rotifera: Monogononta) from Korea

  • Yang, Hee-Min;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.38 no.2
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    • pp.51-58
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    • 2022
  • Four monogonont rotifers, Filinia hofmanni Koste, 1980, Lecane pusilla Harring, 1914, Mikrocodides chlaena (Gosse, 1886), and Proales fallaciosa Wulfert, 1937, were newly recorded in Korea. The genera Mikrocodides Bergendal, 1892 and Proales Gosse, 1886 were recorded for the first time in Korea. Mikrocodides chlaena and Proales fallaciosa were found from soil samples and are both soft-bodied species. Filinia hofmanni has previously been recorded mainly in Europe, and this is its first record in Asia. Lecane pusilla is the 24th lecanid rotifer recorded in Korea, and its morphological characteristics are consistent with previous research of L. pusilla. We have provided the morphological diagnoses of the four Korean specimens in this study, along with the partial sequences of mitochondrial cytochrome c oxidase subunit I(COI) gene of three species.

New Record of Chinook Salmon, Oncorhynchus tshawytscha (Walbaum, 1792) (Salmoniformes: Salmonidae) from Sokcho, Korea (한국산 연어과(Salmonidae) 어류 1미기록종, Oncorhynchus tshawytscha(Walbaum, 1792))

  • Lee, Yu-Jin;Kim, Jin-Koo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.55 no.5
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    • pp.736-741
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    • 2022
  • A single specimen (91.5 cm standard length) of the salmonid species, Oncorhynchus tshawytscha (Walbaum, 1792) was collected on April 19, 2022 in Sokcho-si, Gangwon-do, Korea. O. tshawytscha has the following morphological characteristics: base of lower jaw teeth is black, black spots are scattered on the dorsal section of body, and the edge of caudal fin is black. Although the species is morphologically similar to Oncorhynchus kisutch, O. tshawytscha differs from it in having black spots on the caudal fin. Molecular analysis results based on mitochondrial cytochrome c oxidase subunit I (COI) sequences showed that our specimen perfectly matched with the COI sequences of O. tshawytscha registered at the NCBI. Therefore, we suggest the new Korean name 'Wang-yeon-eo' for O. tshawytscha.

First Record of Scolelepis (Scolelepis) daphoinos (Annelida: Polychaeta: Spionidae) in South Korea

  • Lee, Geon Hyeok;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.37 no.3
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    • pp.229-234
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    • 2021
  • Scolelepis (Scolelepis) daphoinos is newly reported in Korean fauna. This species can be distinguished from its congeners by the following characteristics: the presence of reddish pigment patches on the posterior part of the prostomium, notopodial postchaetal lamellae that are partially fused to the branchiae, and the presence of only the bidentate hooded hooks. The morphological diagnosis and photographs of S. (S.) daphoinos are provided. The partial mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA(16S rDNA), and the nuclear 18S ribosomal DNA (18S rDNA) sequences from Korean specimens of S. (S.) daphoinos were determined. Species identification was supported by a comparison of DNA barcode sequences of COI and 16S rDNA with morphological examination from the specimens of type locality, China.

The First Record of Leocratides kimuraorum (Annelida, Hesionidae) from Korea, with DNA Barcode Data

  • Kim, Hana;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.37 no.3
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    • pp.219-224
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    • 2021
  • A hesionid species, Leocratides kimuraorum Jimi, Tanaka and Kajihara, 2017 is newly reported from the sublittoral zones (100 m depth) of the Korean coasts. This species is characterized by lateral antennae as long as the palps, peristomial membrane without papillose, peristomial dorsolateral tubercles with two round marginal lobes, and pharyngeal with terminal papillae. The intra-specific genetic distance among the cytochrome c oxidase subunit I(COI) sequences of L. kimuraorum specimens from Japan (type locality) and Korea (this study) was in the range of 0.002-0.005. The inter-specific genetic distance between L. kimuraorum and other hesionid species were 0.166-0.307. The present study is the first record of Leocratides species in Korean fauna. This paper also provides a morphological description and photographs of L. kimuraorum, with partial sequences of the mitochondrial COI based on Korean specimens.

New record of the unstalked crinoid Tropiometra macrodiscus (Crinoidea: Comatulida: Tropiometridae) from Korea

  • Kim, Philjae;Lee, Taekjun;Shin, Sook
    • Journal of Species Research
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    • v.11 no.1
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    • pp.22-28
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    • 2022
  • Two crinoid specimens of genus Tropiometra were collected from Busan and Tongyeong by SCUBA diving on August 2010 and October 2011, respectively. The specimens were identified as Tropiometra macrodiscus (Hara, 1895), which belongs to the family Tropiometridae of superfamily Tropiometroidea. The genus Tropiometra AH Clark, 1907 comprises four species worldwide at present, and it has not been reported in Korea. Tropiometra macrodiscus was first described by Hara (1895) in Japan. It is difficult to distinguish T. macrodiscus from T. afra (Hartlaub, 1890), there has been confusion with examination of their phylogenetic positions in crinoid morphological classification. Despite this, T. macrodiscus can be distinguished from T. afra based on longer arms, stouter whole-body parts, magnificently larger numbers of cirrus, and numerous segments. The morphological characteristics of T. macrodiscus collected in Korea have been described, and DNA barcode region representing cytochrome c oxidase subunit I was obtained for its molecular phylogenetic analysis.

New record of two marine synchaetid rotifers (Monogononta: Synchaeta) from Korea

  • Yang, Hee-Min;Min, Gi-Sik
    • Journal of Species Research
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    • v.11 no.3
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    • pp.174-179
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    • 2022
  • In this study, we identified two marine synchaetid rotifers, Synchaeta grimpei Remane, 1929 and S. vorax Rousselet, 1902, in Korea, which are the first synchaetid rotifers collected from a marine environment in the country. Prior to this study, all six synchaetids recorded in Korea were collected from freshwater environments. The morphological characteristics of both species are consistent with those recorded in previous studies of each species. Synchaeta grimpei is distinguished from other synchaetid rotifers by its cone-shaped body, wide and flat apical field, indistinct auricles, and long foot with two separated small toes. The morphological characteristics of Korean S. vorax specimens were most similar to the original description of Rousselet (1902), with its slender and cylindrical trunk shape, strongly convex apical field, and short foot with two small, separated toes. The rami of the Korean S. vorax specimen contained one frontal hook and several distinct and large teeth. Here, we provide the morphological diagnoses of the two synchaetid rotifers and the sequences of the partial mitochondrial cytochrome c oxidase subunit I (COI) of the two species.

First Record of Two Pseudopolydora (Annelida: Spionidae) Species in Korea

  • Lee, Geon Hyeok;Yoon, Seong Myeong;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.38 no.1
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    • pp.26-33
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    • 2022
  • Two Pseudopolydora polychaetes, P. bassarginensis and P. reticulata, originally described from Peter the Great Bay in Russia and Taiwan, respectively, were recorded firstly in Korea with DNA information. Two species are known to have distinct morphological characteristics that are separated from other Pseudopolydora species. They are characterized by reticulate pigmentations on the dorsal sides of the anterior chaetigers, a longitudinal black band-like pigmentation on the caruncle, and black paired spots on the ventral sides of the anterior chaetigers. These two species can be distinguished morphologically from each other by the length of the caruncle. Methyl green staining pattern of the species is a good method for delimiting Pseudopolydora species. The partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA (16S rDNA), and the nuclear 18S ribosomal DNA (18S rDNA) from Korean specimens of the two species were determined. The morphological descriptions and images of the two Pseudopolydora species are provided.