• 제목/요약/키워드: cytochrome c oxidase subunit I (COI)

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New record of two feather mites (Acari: Sarcoptiformes: Astigmata) from Korea

  • Han, Yeong-Deok;Song, Ji-Hun;Min, Gi-Sik
    • Journal of Species Research
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    • 제5권3호
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    • pp.324-332
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    • 2016
  • Two feather mites, Zachvatkinia larica Mironov, 1989 and Ardeacarus ardeae (Canestrini, 1878) are reported for the first time in Korea. Specimens of Z. larica and A. ardeae were collected from the blacktailed gull Larus crassirostris and little egret Egretta garzetta, respectively. The genera Zachvatkinia Dubinin, 1949 and Ardeacarus Dubinin, 1951 are new to this country. Here, we provided morphological descriptions and illustrations of these two species. Additionally, we provide the partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI) as DNA barcode markers.

New record of four Korean feather mites (Acari: Sarcoptiformes: Pterolichidae) isolated from the birds in the family Rallidae

  • Han, Yeong-Deok;Min, Gi-Sik
    • Journal of Species Research
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    • 제6권spc호
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    • pp.152-163
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    • 2017
  • Four feather mite species, Grallobia fulicae (Trouessart, 1885), Grallobia gallinulae Gaud, 1968, Grallolichus proctogamus (Trouessart, 1885) and Megniniella gallinulae (Buchholz, 1869), previously unrecorded in South Korea are reported. Specimens of Grallobia fulicae and Grallolichus proctogamus were collected from the eurasian coot, Fulica atra in Cheongju-si. Grallobia gallinulae and M. gallinulae were found on the common moorhen, Gallinula chloropus in Yesan-gun. The genera Grallobia Hull, 1934, Grallolichus Gaud, 1960 and Megniniella Gaud, 1958 are new records for South Korea. Here, we provide illustrations and morphological descriptions of these four feather mite species as well as the partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI) as DNA barcodes.

New record of two Korean feather mites (Acari: Sarcoptiformes: Astigmata) isolated from water birds

  • Han, Yeong-Deok;Choe, Seongjun;Eom, Keeseon S.;Min, Gi-Sik
    • Journal of Species Research
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    • 제6권spc호
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    • pp.177-184
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    • 2017
  • Two feather mites, Scutomegninia phalacrocoracis Dubinin and Dubinina, 1940 and Ptiloxenus major ($M{\acute{e}}gnin$ and Trouessart, 1884) are reported for the first time in Korea. Specimens of S. phalacrocoracis and P. major were collected from the great cormorant, Phalacrocorax carbo and great crested grebe, Podiceps cristatus, respectively. The genera Scutomegninia Dubinin, 1951 and Ptiloxenus Hull, 1934 are also new reports for South Korea. Here, we provide morphological descriptions and illustrations of these two species. Additionally, we provide partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI) as DNA barcodes.

First Record of the Monotypic Species, Nonparahalosydna pleiolepis (Polychaeta: Polynoidae) from Korean Waters, with Its DNA Barcoding Information

  • Kim, Kwang-Soo;Choi, Hyun Ki;Lee, Wonchoel;Park, Taeseo
    • Animal Systematics, Evolution and Diversity
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    • 제36권3호
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    • pp.258-263
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    • 2020
  • The aim of this study is to report monotypic species, Nonparahalosydna pleiolepis(Marenzeller, 1879) for the first time from Korean waters with its DNA barcoding data. We collected individuals of the species from the subtidal zone of southern coast of Korea through scuba diving. To estimate DNA barcoding gap, the pairwise genetic distances were calculated between N. pleiolepis and its congeners (Halosydna brevisetosa Kinberg, 1856 and Lepidonotus squamatus (Linnaeus, 1758)) based on the cytochrome c oxidase subunit I gene (COI). Inter-specific genetic distances ranged from 18.7% to 24.6%, while intra-specific genetic distance within N. pleiolepis ranged from 0.3% to 0.5%. The maximum intra-specific genetic distance among the three species was 1.4%. The morphological diagnosis of N. pleiolepis with a taxonomic note on the species were also provided.

DNA Barcoding of Scolelepis (Parascolelepis) papillosa (Annelida, Spionidae) in Korea, with Additional Taxonomic Notes

  • Lee, Geon Hyeok;Lee, Ha-Eun;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제37권4호
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    • pp.349-353
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    • 2021
  • Scolelepis (Parascolelepis) papillosa (Okuda, 1937), originally described from a single incomplete individual from Jeju Island in Korea, was collected from the intertidal sandflats of Soan Island (Jeollanam-do province) in Korea. The examined specimens of S. (P.) papillosa agree well with the original description in having the papillae on the basal sheath of the palps, presence of occipital antenna, absence of notochaetae in chaetiger 1, branchiae completely fused with notopodial postchaetal lamellae at the anterior chaetigers, and neuropodial hooded hooks appearing from chaetiger 16. In this study, the sequences of partial mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA (16S rDNA), and the nuclear 18S ribosomal DNA (18S rDNA) of the species were determined. We also provide the detailed description and illustrations on this species based on the complete specimens newly collected in this study.

Three Feather Mites (Acari: Sarcoptiformes) Isolated from Black-Tailed Godwit, Limosa limosa in Korea

  • Han, Yeong-Deok;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제35권3호
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    • pp.105-113
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    • 2019
  • Feather mites comprise two superfamilies(Analgoidea and Pterolichoidea) and are highly specialized ectosymbionts of birds. To date, this group contains more than 2,500 species worldwide. Fifty-five feather mite species have been reported in Korea, and only one species of genus Alloptes has been recorded from black-tailed godwit Limosa limosa. Three new records of feather mites from the L. limosa in Korea are added in this study: Avenzoaria punctata Gaud, 1972, Bregetovia limosae (Buchholz, 1869), and Montchadskiana buchholzi (Canestrini, 1878). The genus Bregetovia Dubinin, 1951 is also new report for this country. In this paper, we provide the morphological descriptions and illustrations based on the present specimens. Additionally, we determined partial sequences of the mitochondrial cytochrome c oxidase subunit I(COI) from three feather mites as DNA barcodes.

First Record of the Brackish Water Amphipod Jesogammarus (Jesogammarus) hinumensis (Amphipoda: Anisogammaridae) from Korea with DNA Barcode Analysis among Jesogammarus Species

  • Lee, Chi-Woo;Tomikawa, Ko;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제35권3호
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    • pp.151-155
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    • 2019
  • Jesogammarus (Jesogammarus) hinumensis Morino, 1993 was discovered firstly from a brackish water region in Jeju Island, Korea. To identification of the specimens we conducted both of morphological and molecular analyses. This species is characterized by having large eyes and a robust seta on the mandibular palp article 1. The morphology of this Korean specimens was well matched with the original description without variation. The mitochondrial cytochrome c oxidase subunit I(COI) sequences of the present specimens were also completely identical to the sequences of J. (J.) hinumensis collected from the type locality of the species. Thus, we concluded that the Jesogammarus species from Jeju Island is J.(J.) hinumensis, based on both morphological and molecular data.

A New Record of the Brittle Star, Amphistigma minuta (Ophiuroidea: Amphilepidida: Amphiuridae), from Jeju Island, Korea

  • Lee, Taekjun;Shin, Sook
    • Animal Systematics, Evolution and Diversity
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    • 제35권2호
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    • pp.84-90
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    • 2019
  • The brittle star, Amphistigma minuta H.L. Clark, 1938, was collected from Munseom Island, Jeju-do, Korea, by SCUBA diving. This species has distinct morphological features, as follows: a small disk with large papillae on the disk margin; slender arms and four arm spines at proximal; and oral parts the same as those of the genus Amphipholis. Additionally, we obtained partial sequences of the cytochrome c oxidase subunit I gene (COI) (513 bp) and compared them with sequences from Australian A. minuta and 13 other species of Amphiuridae. As a result, intraspecific pairwise distance was 0.4% between two Korean individuals and intraspecific distance between the Australian and the Korean populations was 2.6-2.8%, which indicates they should be considered as the same species. Ultimately, 15 species of the family Amphiuridae have currently been recorded in Korea, including A. minuta.

DNA Barcoding of Antarctic Freshwater Copepod Boeckella poppei (Crustacea: Copepoda: Calanoida: Centropagidae) Inhabiting King George Island, South Shetland Islands, Antarctica

  • Kang, Seunghyun;Jo, Euna
    • Animal Systematics, Evolution and Diversity
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    • 제36권4호
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    • pp.396-399
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    • 2020
  • The Antarctic freshwater copepod, Boeckella poppei (Mrazek, 1901), has the widest range of distribution extending from southern South America to Antarctic continent, among all Boeckella species. Boeckella poppei is the only freshwater copepod known to be inhabiting the Antarctic continent. In present study, we analyzed the DNA barcodes of the mitochondrial cytochrome c oxidase subunit I (COI) gene of B. poppei from King George Island, Antarctica. The intraspecific genetic distances varied from 0% to 13% and interspecific genetic distances ranged from 11% to 14%. The overlap of DNA barcode gap suggests careful threshold-based delimitation of species boundaries.

The First Record of the Marphysa victori (Polychaeta, Eunicida, Eunicidae) from Korea, with DNA Barcode Data

  • Kim, Hana;Kim, Keun-Yong;Phoo, War War;Kim, Chang-Hoon
    • Animal Systematics, Evolution and Diversity
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    • 제37권1호
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    • pp.1-8
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    • 2021
  • A eunicid polychaete, Marphysa victori Lavesque, Daffe, Bonifácio & Hutchings, 2017 is described for the first time from the intertidal zones of the Korean coasts. It is characterized by having three types of pectinate chaetae (INS, isodont-narrow-slender; AWS, anodont-wide-slender; and AWT, anodont-wide-thick), appearance of pectinate chaetae from chaetiger 2, the chaetae consisted of pectinate and compound spinigers, and pygidium with one pair of pygidial cirri. In genetic analysis based on cytochrome c oxidase subunit I (COI), intra-specific genetic distance between the specimens of M. victori from its type locality, France and Korea are in the range of 0.000-0.013. This paper includes the morphological description and photographs of M. victori new to Korean fauna, with partial sequences of the mitochondrial COI as DNA barcode data on this species.