• Journal of Environmental Science International
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• v.17 no.10
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• pp.1155-1167
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• 2008

Chlorophyll a (chl a) has been used as an indicator for phytoplankton biomass in pelagic ecosystems due to the relative ease of measurement and selectivity for autotrophs in mixed plankton assemblages. However, the use of chi a as an indicator for phytoplankton biomass is restricted due to its inability to resolve taxonomic differences of phytoplankton and the highly variable relationship of chi a with phytoplankton. Here, we describe the analysis of High-Performance Liquid Chromatography (HPLC) photosynthetic pigment data using CHEMTAX, which is a matrix factorization program that uses chemical taxonomic indices (phytoplankton carotenoids) to quantify the abundance of phytoplankton groups. Compared to direct microscopic counting that can distinguish species within broad groups, the resolution of taxonomic groups by CHEMTAX is generally coarse. It can only distinguish between diatoms, dinoflagellates, cryptophytes, cyanobacteria, chlorophytes, prasinophytes, and haptophytes. However, CHEMTAX analysis is much faster and less expensive than microscopic counting methods. HPLC pigment observations were taken in the spring, summer, fall, and winter in$ 2005\sim2006$ within Gamak Bay, South Korea. CHEMTAX results revealed that diatoms were the dominant taxonomic group in Gamak Bay. In inner Gamak Bay, the ratio between diatoms and cryptophytes was $75\sim80%$, and the ratio between dinoflagellates and cryptophytes was $10\sim15%$. In outer Gamak Bay, the ratio between diatoms and cryptophytes was $85\sim90%$, and the ratio between dinflagellates and cryptophytes was only $1\sim5%$. The population structure was seasonal. Relative diatom populations were less in the summer than the winter season.

• Korean Journal of Environmental Biology
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• v.36 no.1
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• pp.62-72
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• 2018

In order to provide important information for the efficient management of the identified farm ecosystem in Jinju Bay, we investigated the spatial and temporal distribution of the phytoplankton community using a UPLC pigment analysis and a CHEMTAX program from the timeframe of February 2013 to January 2014. In addition, we measured the available physical and chemical parameters controlling the distribution of the phytoplankton communities. As a result of this comprehensive pigment analysis, it was noted that the Diatoms were the predominant species with an average of 77.1% as noted located in Jinju Bay. It was discovered that during the summer season, the phytoplankton community composition was changed by a reduction of diatoms and noted increases of the Cryptophytes, Prasinophytes, and Dinoflagellates. Especially, it was noted that the Cryptophytes and Prasinophytes were shown with an average of 18.8% and 17.8% in June, respectively. However, it was revealed that the Cryptophytes and Prasinophytes were not shown by a microscopic observation. The phytoplankton community composition was correlated with the temperature and salinity variations as noticed in the Jinju Bay. Therefore, the water temperature and freshwater inputs in the Jinju Bay were important environmental factors for controlling the phytoplankton community composition and the varying Cryptophytes and the noted amounts of Prasinophytes as well.

• ALGAE
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• v.24 no.3
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• pp.139-147
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• 2009

Microalgae using a submersible fluorescence probe in water column (up to 100 m) were measured during the austral summer of 2006 (February) in Prydz Bay, East Antarctica (triangular-shaped embayment in the Indian sector of Southern Ocean). Concurrently, environmental parameters such as temperature, salinity and nitrogen (nitrate, ammonium, urea) uptake rates were measured. The concentration of phytoplankton is relatively high due to availability of high nutrients and low sea surface temperature. Phytoplankton community is dominated by diatoms whereas cryptophytes are in low concentration. The maximum concentration of total chlorophyll is 14.87 ${\mu}g\;L^{-1}$ and is attributed to upwelled subsurface winter water due to local wind forcing, availability of micro-nutrients and increased attenuation of photosynthetically available radiation (PAR). Concentration of blue-green algae is low compared to that of green algae because of low temperature. Comparatively high concentration of yellow substances is due to the influence of Antarctic melt-water whereas cryptophytes are low due to high salinity and mixed water column. Varied concentrations of phytoplankton at different times of Fluoroprobe measurements suggest that the coastal waters of Prydz Bay are influenced by changing sub-surface water temperature and salinity due to subsurface upwelling induced by local winds as also melting/freezing processes in late summer. The productivity is high in coastal water due to the input of macro as well as micro-nutrients.

• Ocean Science Journal
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• v.41 no.1
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• pp.31-41
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• 2006

Seasonal changes of abundance of the main phytoplankton groups of species (diatoms, dinoflagellates, chrysophytes, small flagellates and cryptophytes) and a set of environmental parameters were investigated in coastal and pre-estuarine waters of Peter the Great Bay (East/Japan Sea) in May-October of 1998 and 1999. Three periods of mass development were revealed: spring, summer and autumn blooms, with successive change of species. The conditions favourable for each group of species were determined. Driving mechanisms of the succession include nutrients transport through seasonal pycnocline by turbulent mixing, terrestrial nutrients supply by monsoon floods, nutrients supply by upwellings, and light control by the thickness of upper mixed layer. Summer succession could be explained by a simple SST-MLD diagram similar to Pingree S-kh diagram with sea surface temperature as indicator of stratification (S) and mixed layer depth as indicator of light availability (kh).

• ALGAE
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• v.17 no.1
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• pp.1-9
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• 2002

Diel vertical distribution of phytoflagellates and interactions between the phytoplankton components and environmental and biological factors were studied in a small artificial pond for three days on the December 18, 1998 and April 9 to 10, 1999. The phytoplankton population was dominated by Mallomonas akrokomos of chrysophytes and Cryptomonas marssonii and Chroomonas sp. of cryptophytes. The vertical distribution of these phytoflagellates taxa exhibited clear diel migration pattern. Moreover their migration patterns are showed differential fluctuation between M. akrokomos, C. marssonii and Chroomonas sp. The later two species upward migrated in the evening as well as night, whereas the former species migrated downward. Their distinctive migration pattern was found during the night but was not observed in the morning. During daytime C. marssonii and Chroomonas sp. showed maximum density above 2 m depth but M. akrokomos below 2 m depth. The diel vertical distribution of the dominant phytoflagellates did not show significant correlation between physical, chemical and biotic factors.

• Korean Journal of Environmental Biology
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• v.40 no.4
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• pp.374-386
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• 2022

Phytoplankton communities, with emphasis on picoplankton and nanoplankton, were investigated in Gamak Bay, South Korea, where freshwater input and coastal water intrusion shape ecosystem functions. Shellfish farms and fish farms are located in the inner bay and outer bay, respectively, and tides translocate uneaten food and urine production from aquaculture farms toward the inner bay. Water masses were distinctly different based on a significantly different density between the surface and bottom layer and among three water masses, including the inner bay, outer bay, and Yeosu Harbor. Phytoplankton communities were quantified using flow cytometry and size-fractionated chlorophyll-a (chl-a) was measured. Salinity was a principal variable separating phytoplankton communities between the surface and bottom layer, whereas Si(OH)₄ controlled the communities in the inner bay, and NH₄⁺ and PO₄^3- governed the outer bay communities. While phycocyanin-containing (PC) cyanobacteria dominated in the outer bay, phycoerythrin-containing (PE) cyanobacteria dominance occurred with cryptophyte dominance, indicating that nutrients affected the distribution of pico- and nanoplankton and that cryptophytes potentially relied on a mixotrophic mode by feeding on PE cyanobacteria. Interestingly, picoeukaryotes and eukaryotes larger than 10 ㎛ were mostly responsible for the ecological niche in the western region of the bay. Given that chl-a levels have historically declined, our study highlights the potential importance of increased small phytoplankton in Gamak Bay. Particularly, we urge an examination of the ecological role of small phytoplankton in the food supply of cultivated marine organisms.

• Journal of the korean society of oceanography
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• v.34 no.2
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• pp.95-112
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• 1999

To investigate a phytoplankton community structure and its biomass distribution in the Korea Strait, phytoplankton pigments were quantitatively measured by HPLC method, with hydro-graphic conditions in August and October, 1996. The measured chi. a concentrations were in the range of 7.1-1,280.7 ng/1. Horizontal distribution pattern of chi. a in summer (August) was very different from that of autumn (October). High concentration of chi. a occurred near the coast with relatively low salinity (< 33%). Vertically, the highest concentrations of pigments at most of the stations were found near the surface and above the thermocline. The maximum concentration of chi. a in October was four times higher than in August. It was notable to measure relatively high concentration of chi. b up to 190.8 ng/1 in the study area, since chi. bcontaining green algae and prochlophytes have been ignored because of their minute size and sensitivity to common preservatives. Major carotenoids detected were fucoxanthin, zeaxanthin, 19'-hexanoyloxyfucoxanthin, and prasinoxanthin. Diatoms were the dominant group with secondary important groups as pryrnnesiophytes and cyanobacteria for the biomass of phytoplankton for both cruises. The dominant species of diatoms in summer were Thalassiosira sp. and Chaetoceros peruvianus. As minor groups, prasinophytes, crysophytes, and cryptophytes were confirmed by their marker pigments and dinoflgellates by microscopical observation. Degradation products of chi. a was minor. Interestingly, at 200 m depth of St A4, the deepest station in the western channel of the Korea Strait, substantial amounts of chi. a including fucoxanthin, 19'-hexanoyloxyfucoxanthin, chi. b, and degradation products of chi. a was measured from both cruises. Higher concentration (2-3 times) of those pigments were detected from samples in summer than in autumn. Small decrease in concentration of phosphate at this depth of St. A4 was also observed. It suggested that this bottom cold water was transported from the subsurface water with biomass of active phytoplankton, which was sunk and flowed southward.

• Journal of Environmental Science International
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• v.17 no.2
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• pp.149-162
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• 2008

Aquatic and riparian vegetation of river ecosystems are very important both in ecological and management perspectives. Vegetation surveys were conducted to understand the characteristics of riparian vegetation in the mid and lower reaches of the Nakdong River, Korea. A total of 68 families and 260 species were identified at eleven survey sites. The numbers of taxa were similar to those reported in a previous survey in 1996,but the percentage of naturalized plants increased more than two times compared to that in the previous survey. Survey sites near Yangsan Bridge and Nambu Park in Yangsan showed the highest percentage of naturalized plant species. Urbanization indices of the survey sites were high at 18.8% on average. Therophytes were the most dominant plant life form at the survey sites with 39.2% of total plants identified, followed by phanerophytes (19.2%), hemicryptophytes (18.9%), aquatic plants (13.9%), cryptophytes (5.8%), and chamaephytes (3.1%). The relative composition of hemicryptophytes decreased whereas those of therophytes and chamaephytes increased compared to those in the survey in 1996. This may be due to increase in dryness of riparian soils or degradation of riparian areas. Plant compositions at sites near Jeokpo Bridge and Hwoicheon suggest that the composition and distribution of riparian vegetation are affected by land use pattern surrounding riparian areas or human accessibility to the areas.

• Ocean and Polar Research
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• v.35 no.1
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• pp.39-50
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• 2013

Biomass and community composition of microphytobentos in tidal flats were studied by HPLC analysis and also investigated to examine the relationship between microphytobenthic pigments and Adenosine-5' triphosphate (ATP) as an index of total microbial biomass in intertidal environments (muddy and sandy sediment) of Gyeonggi Bay, west coast of Korea. Microphytobenthic pigments and ATP concentration in muddy sediment were the highest at the surface while the biomass of microphytobenthos in sandy sediment was the highest at the sub-surface (0.75 cm sediment depth). The detected pigments of microphytobenthos were chlorophyll a, b (euglenophytes), $c_3$, peridinin (dinoflagellates), fucoxanthin (diatom or chrysophytes), diadinoxanthin, alloxanthin (cryptophytes), diatoxanthin, zeaxanthin (cyanobacteria), ${\beta}$-carotein, and pheophytin a (the degraded product of chlorophyll a). Among the pigments which were detected, the concentration of fucoxanthin was the highest, indicating that diatoms dominated in the microphytobenthic community of the tidal flats. There was little significant correlation between OC (Organic Carbon) and ATP in both sediments. However, a positive correlation between chlorophyll a concentration and ATP concentration was found in sandy sediment, suggesting that microbial biomass could be affected by labile OC derived from microphytobenthos. These results provide information that may help us understand the relationship between microphytobenthos and microbial biomass in different intertidal sediment environments.

• Ocean and Polar Research
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• v.35 no.4
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• pp.415-425
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• 2013

In order to understand phytoplankton and bacterial distribution in tropical coral reef ecosystems in relation to the mangrove community, their biomass and activities were measured in the sea waters of the Chuuk and the Kosrae lagoons located in Micronesia. Chlorophyll a and bacterial abundance showed maximal values in the seawater near the mangrove forests, and then steeply decreased as the distance increased from the mangrove forests, indicating that environmental conditions for these microorganisms changed greatly in lagoon waters. Together with chlorophyll a, abundance of Synechococcus and phototrophic picoeukaryotes and a variety of indicator pigments for dinoflagellates, diatoms, green algae and cryptophytes also showed similar spatial distribution patterns, suggesting that phytoplankton assemblages respond to the environmental gradient by changing community compositions. In addition, primary production and bacterial production were also highest in the bay surrounded by mangrove forest and lowest outside of the lagoon. These results suggest that mangrove waters play an important role in energy production and nutrient cycling in tropical coasts, undoubtedly receiving large inputs of organic matter from shore vegetation such as mangroves. However, the steep decrease of biomass and production of phytoplankton and heterotrophic bacteria within a short distance from the bay to the level of oligotrophic waters indicates that the effect of mangrove waters does not extend far away.