• The Korean Journal of Applied Statistics
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• v.28 no.1
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• pp.49-60
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• 2015

Various kinds of ordination methods such as correspondence analysis and canonical correspondence analysis are used in community ecology to visualize relationships among species, sites, and environmental variables. Ter Braak (1986), Jackson and Somers (1991), Parmer (1993), compared the ordination methods using eigenvalue and distance graph. However, these methods did not show the relationship between population and biplot because they are only based on surveyed data. In this paper, a method that measures the extent to show population information to biplot was introduced to compare ordination methods objectively.

• The Korean Journal of Ecology
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• v.15 no.2
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• pp.117-125
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• 1992

TWINSPAN(two-way indicator species analysis), DCCA(detrended canonical correspondence analysis) and polar ordination method wee used so as to analyze the the relation between forest vegetation and hibitat of mudungsan(1, 187m) located in kwangju area. Vegetationsurvey consulted 1:25, 000 topographical map, set up 41 quadrats and analyzed from April, 1990 to August, 1991. Forest vegetation of mudungsan was classifild to quercus acutissima community, fraxinus mandshurica community, quercus mongolica community, quercus serrata community, quercus dentata community, quercus variabilis community, and pinus densiflora community by TWINSPANmethod, and this almost coincide with the result of plar ordination. according to DCCA analysis, P. densiflora community was formed in xeric and low altitude region which soil nutrient was poor, compared with other communities. q. variabilis and q. acutissima community wee distributed in the region that low altitude and organic matter content was comparatively low, but q. acutissima community was formed in a damp region while q. variabilis community in a xeric region. q. mongolica and f. mandshurica formed the communities in a high altitude region, especially f. mandshurica cmmunity was distributed in a high humidity region. According to polar ordination analysis, the forest vegetation was classified to 7 communities by means of environmental gradient such as humidity, organic matter, ph, temperature, c.e.c and P2O5.

• Korean Journal of Ecology and Environment
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• v.41 no.spc
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• pp.1-10
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• 2008

We patterned water quality of agricultural reservoirs according to the differences of six physico-chemical environmental factors (TN, TP, DO, BOD, COD, and SS) using four different ordination methods: Principal Components Analysis (PCA), Detrended Correspondence Analysis (DCA), Nonmetric Multidimensional Scaling (NMS), and Isometric Feature Mapping (Isomap). The data set was obtained from the water quality monitoring networks operated by the Ministry of Agriculture and Forestry and the Ministry of Environments. Chlorophyll-${\alpha}$ displayed the highest correlation with COD, followed by TP, BOD, SS, and TN (p<0.01), while negatively correlated with altitude and bank height of the reservoirs (p<0.01). Although four different ordination methods similarly patterned the reservoirs according to the gradient of nutrient concentration, PCA and NMS appeared to be the most efficient methods to pattern water quality of reservoirs based on the explanation power. Considering variable scores in the ordination map, the concentration of nutrients was positively correlated with Chl-${\alpha}$, while negatively correlated with altitude and bank height. These ordination methods may help to pattern agricultural reservoirs according to their water quality characteristics.

• Journal of Environmental Science International
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• v.32 no.5
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• pp.329-341
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• 2023

We surveyed the vegetation of an ecological landscape preservation area (legally protected conservation areas or national parks) and the surrounding areas of Mt. Cheonggye, Republic of Korea, to explore the conservation implications for preservation areas and surrounding transition areas. We calculated diversity indices to identify the properties of the preservation and surrounding areas that are relevant to conservation efforts. We then compared the plant community composition between the areas using field and quadrat surveys in the preservation and surrounding areas. The cover of the dominant species in all tree and herb layers was markedly higher in the preservation area than in the peripheral zones. The species richness indices were significantly higher in the preservation area than in the peripheral zones. Ordination using detrended canonical correspondence analyses showed that the cover of the dominant tree species and rocks could explain the distribution of plant species in the Cartesian space of the ordination. Our results demonstrate that physiognomically designated protected areas match well with ecological data based on diversity indices and ordination analyses and that disturbances in the areas surrounding the ecological landscape of preservation areas can have considerable impacts on plant diversity indices. Hence, the preservation and management of surrounding areas are essential conservation elements for protecting the entire ecological landscape of preservation areas.

• The Korean Journal of Applied Statistics
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• v.28 no.3
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• pp.485-494
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• 2015

Canonical correspondence analysis is an ordination method used to visualize the relationships among sites, species and environmental variables. However, projection results are fluctuations if the samples slightly change and consistent interpretation on ecological similarity among species tends to be difficult. We use the bootstrap methods for canonical correspondence analysis to solve this problem. The bootstrap method results show that the variations of coordinate points are inversely proportional to the number of observations and coverage rates with bootstrap confidence interval approximates to nominal probabilities.

• The Korean Journal of Ecology
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• v.20 no.2
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• pp.125-132
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• 1997

A study of forest vegetation in Mt. $T\v{o}kyu$ National Park was investigated by ordination technique. By TWINSPAN(Two-Way Indicator Species Analysis) method, 10 groups were recognized as follows: pinus densiflora, Quercus variabilis, Quercus serrata, Quercus mongolica-Rhododendron schlippenbachii, Quercus mongolica-Abies koreana, Quercus mongolica-Acer pseudo-sieboldi-amum, Quercus mongolica-Symplocos chinensis for. pilosa, Carpinus laxiflora, Fraxinus mandshurica and Taxus cuspidata groups. The floristic composition of these groups showed high correlation to soil moisture(r=0.831), altitude(r=0.784), topography(r=-0.722), organic matter(r=0.642), and pH(r=-0.509) among various environmental factors. According to the results of CCA(Canonical Correspondence Analysis) Pinus densiflora group and Quercus variabilis group were situated in a xeric area at a lower altitude where soil nutrients were poor compared with the other groups. Fraxinus mandshurica group was distributed throughout the valley with high soil moisture and good nutrients, Quercus serrata group and Carpinus laxiflora group were found in the low altitude region with good nutrients, Quercus mongolica group, at the high altitude region with good nutrients, and Quercus mongolica-Acer koreana and Taxus cuspidata at higher altitudes(1, 400-1600 m).

• The Korean Journal of Ecology
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• v.10 no.2
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• pp.63-80
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• 1987

Detrended correspondence analysis(DCA) and two way indicator species analysis(TWINSPAN) were applied to Pinus densiflora stands nearby Seoul area in order to classify them into several groups based on herbaceous species and environmental relationships. The eighteen Pinus densiflora stands were perferenially selected, In each stand, 30 to 60 quadrats, (20X20)cm, were randomly estabilished. In each quadrat, all stems for herbaceous plants were recorded by species and their covers were measured. In addition environmental factors such as soil depth, thickness of litter layer, soil compressibility, tree density, basal area, elevation, slope and exposure were detemined for each stand. Four to twelve soil cores were collected and physical and KDICical properties were determined. This survey was conducted form 15, July, 1985 to 22, September, 1985. Analysis of the vegetation and environmental data were performed with DECORANA and TWINSPAN. Stand ordination (DECORANA) and classification (TWINSPAN) based on herbaceous species suggest that the stands can be classified into five groups in terms of herbaceous species composition and environmental relationships. Type I, Type II, Type III, Type IV and Type V were classified to SUBMESIC-CLO-SED-CANOPY (Artemisia keiskeana, Carex nanella), MESIC-CLOSED CANOPY (Spodiopogon sibiricus, Miscanthus sinensis, Carex nanella, Pteridum aquilinum, Melampyrum rosium), SUBMESIC-OPEN CANOPY (Carex nanella, Spodiopogon sibiricus, Miscanthus sinensis), XERIC-CLOSED CANOPY (Carex nanella, Spodiopogon sibiricus, Carex nanella), and XERIC-OPEN CANOPY (Arundinella hirts, Spodiopogon sibiricus, Carex nanella), respectively. These results were consitent with environmental trends on stan ordination. Application of the ordination and classifiaction to Pinus densiflora stands were effective as a approach on obtaining perliminary ecological information.

• Journal of Korean Society of Forest Science
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• v.81 no.4
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• pp.310-319
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• 1992

Vegetational data obtained from 24 quadrats of Mt. Paekdu area were analysed by applying two multivariate methods : two-way indicator species analysis(TWIMSPAN) for classification and detrended canonical correspondence analysis(DCCA) for ordination. DCCA technique allowed to extract the ordination axes that could be related to 9 environmental factors. The dominant tree species distributed in the region between 1,700-1,950m from sea level were Betula ermanii, Larix olgensis, Abies nephrolepis, and Picea jezoensis in descending order. The dominant tree species distributed in the region between 1.300-1.500m were Abies nephrolepis, Pinus koraiensis, Larix olgensis, Betula mandshurica, and Picea jezoensis in descending order. The available phosphorus content in forest soil ranged from 7 to 1.153ppm. The distribution of the major communities showed a close relationship with elevation gradient. From high to low elevation, the communities of Alnus fruticosa var. mandshurica, Betula ermanii, Larix olgensis, Abies nephrolepis, Picea jezoensis, Pinus koraiensis, and Quercus mongolica were found in descending order. At the communities where Betula ermanii was dominant, Betula ermanii forest was distributed in the high elevation area, Betula ermanii-Larix olgensis forest in the good nutrition of organic matter and $K^+$, and Abies nephrolepis forest in the good nutrition of $Mg^{{+}{+}}$ and $Ca^{{+}{+}}$. The most dominant factor influencing community distribution was elevation.

• Korean Journal of Environmental Biology
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• v.27 no.4
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• pp.334-340
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• 2009

In other to know the feeding preference over the degree of ripeness and size of fruits in birds, we gave them to three bird species in breeding condition, counted and analyzed the number of fruits by correspondence ordination technique. Chrysolophus pictus did not show a distinct preference in respect to degree of maturity or size of fruits of among three tree species. Columba rupestris preferred un-ripen fruits over ripen ones of Prunus yedoensis or Elaeagnus multiflora, but did not choose selectively in case of fruits of Malus sieboldii. Pavo muticus showed the reverse favorable pattern of Columba rupestris. Total feeding amounts eaten by birds were dependent on the initial feeding amounts of fruits. These results indicated that in feeding activity some birds chose differently in terms of species or maturity of fruits, but not in fruit size.

• The Korean Journal of Ecology
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• v.17 no.3
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• pp.391-413
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• 1994

The northernmost type of the monogolian oak forests in the Russian Far East was studied in terma of syntaxonomy and synchorology. Hand-sorting method, computer program TWIN-SPAN, CANOCO and SYN-TAX III were engaged for the classification and data analysis. Correlation between plant communitie and environmental factors was analyzed by DCA (Detrended Correspondence Analysis) using NeCD (Net Contribution Degree) of species. Three plant communities were recognized: the Abieti holophyllae-Quercetum mongolicae, the Lespedezo-quercetum mongolicas and the Rosa ussuriensis-Quercus mongolica communit. They were included into the alliance Jeffersonio-Quercion monogolicae which is representative to the cool-Temperate forests mixed by conierous and broadleaved trees in southern Sikhote Alin. Human impact was signified as the most important factor to interpret the disjunction of plant communities of which DCA ordination yielded sharp contrasting objects (i.e. stands and species). In the amhi-Tonghae region, alaogous vegetation types such as the Jeffersonio-Quercion monogolicae of Russian Far East, the Quercion grosseserratae of Japanese Hokkaido and the Pino koraiensis-Quercion monogolicae of Koream peninusula were reviewed in terms of similarity of species composition and stratum structure. It is signified that the Jeffersonio-Quercion monogolicae was one of the continental types more similar to Korean alliance that to Japanese one.