• 제목/요약/키워드: correlation coefficient matrix

검색결과 119건 처리시간 0.027초

Genetic Diversity of Barley Cultivars as Revealed by SSR Masker

  • Kim, Hong-Sik;Park, Kwang-Geun;Baek, Seong-Bum;Suh, Sae-Jung;Nam, Jung-Hyun
    • 한국작물학회지
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    • 제47권5호
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    • pp.379-383
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    • 2002
  • Allelic diversity of 44 microsatellite marker loci originated from the coding regions of specific genes or the non-coding regions of barley genome was analyzed for 19 barley genotypes. Multi-allelic variation was observed at the most of marker loci except for HVM13, HVM15, HVM22, and HVM64. The number of different alleles ranged from 2 to 12 with a mean of 4.0 alleles per micro-satellite. Twenty-one alleles derived from 10 marker loci are specific for certain genotypes. The level of polymorphism (Polymorphic Information Content, PIC) based on the band pattern frequencies among genotypes was relatively high at the several loci such as HVM3, HVM5, HVM14, HVM36, HVM62 and HVM67. In the cluster analysis using genetic similarity matrix calculated from microsatellite-derived DNA profiles, two major groups were classified and the spike-row type was a major factor for clustering. Correlation between genetic similarity matrices based on microsatellite markers and pedigree data was highly significant ($r=0.57^{**}$), but these two parameters were moderately associated each other. On the other hand, RAPD-based genetic similarity matrix was more highly associated with microsatellite-based genetic similarity ($r=0.63^{**}$) than coefficient of parentage.

비생물 및 생물 요인에 기초한 통합적 하천자연도 평가기법에 관한 연구 (Studies on the Integrated Stream Naturalness Assessment Based on Abiotic and Biotic Factors)

  • 표재훈;문형태
    • 환경영향평가
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    • 제20권1호
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    • pp.61-69
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    • 2011
  • Integrated stream naturalness based on abiotic and biotic factors were developed. Abiotic factors considered in this study were types of land use in the riparian area, river bank and high water bed streamside, revetment, bed substrate and artificial construction of streamside. Biotic factors included types of vegetation, assemblages of fish, macroinvertebrate, bird and mammal(Otter) in streams. The presence/absence of legal species and biological assessment index were also weighted as important parameters in this study. Scoring criteria selected for each matrix was five rating system; 1=poor, 2=moderate, 3=fair, 4=good, 5=excellent. Numerical ratings for the matrix were then summed. This resulted in a minimum score of 13 if all matrix at a site were poor, and a maximum score of 65 if all matrix were excellent. Five grade system from poor(I) to excellent condition(V) was employed. To verify its validity in natural environment, the evaluation system was applied to the Gapchun stream which is a test bed selected. Our result showed that stream naturalness of each reach was clearly distinguished by biotic and abiotic characteristics. Determination of correlation coefficient between abiotic and biotic factors was also high ($R^2=0.96$, p<0.05). In conclusion, assessment for stream naturalness reflecting abiotic and biotic factors was useful method representing stream integrated.

Latin Hypercube Sampling Based Probabilistic Small Signal Stability Analysis Considering Load Correlation

  • Zuo, Jian;Li, Yinhong;Cai, Defu;Shi, Dongyuan
    • Journal of Electrical Engineering and Technology
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    • 제9권6호
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    • pp.1832-1842
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    • 2014
  • A novel probabilistic small signal stability analysis (PSSSA) method considering load correlation is proposed in this paper. The superiority Latin hypercube sampling (LHS) technique combined with Monte Carlo simulation (MCS) is utilized to investigate the probabilistic small signal stability of power system in presence of load correlation. LHS helps to reduce the sampling size, meanwhile guarantees the accuracy and robustness of the solutions. The correlation coefficient matrix is adopted to represent the correlations between loads. Simulation results of the two-area, four-machine system prove that the proposed method is an efficient and robust sampling method. Simulation results of the 16-machine, 68-bus test system indicate that load correlation has a significant impact on the probabilistic analysis result of the critical oscillation mode under a certain degree of load uncertainty.

혼합모형을 이용한 반복 측정된 변수들 간의 상관분석 (Assessing Correlation between Two Variables in Repeated Measurements using Mixed Effect Models)

  • 한경화;정인경
    • 응용통계연구
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    • 제28권2호
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    • pp.201-210
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    • 2015
  • 생명과학 또는 의학 연구에서는 반복 측정된 변수들 간의 상관 관계를 보고자 하는 경우가 발생한다. 반복 측정된 것을 고려하지 않으면 상관관계를 과소 추정하는 경향이 나타나므로 이를 고려해야 하며, 선형혼합모형의 분산-공분산 행렬을 이용하여 상관관계를 추정할 수 있다. 본 연구에서는 변수들의 반복 측정이 동시에 된 경우와 그렇지 않은 경우로 나누어 혼합모형을 이용한 상관계수의 추정방법을 소개한다. 고속 음향 복사력 임펄스 영상(acoustic radiation force impulse imaging; ARFI)으로 간과 비장에서 각각 세 번씩 전단파 속도를 반복 측정하고 복부 초음파 검사로 비장 길이를 측정한 자료에서 전단파 속도와 비장 길이 간의 상관 관계를 분석하기 위해 본 논문에서 소개한 방법들을 적용하였고 SAS의 PROC MIXED를 이용하는 방법을 제시하였다.

한국 소비자원 의료분야 처리금액에 대한 시계열 분석 (Time series analysis for the amount of medicine from the Korea Consumer Agency)

  • 강희송;권숙희;이성덕
    • 응용통계연구
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    • 제36권1호
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    • pp.21-32
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    • 2023
  • 한국 소비자원의 의료 분야 처리금액 자료에 대한 시계열 모형을 이용한 실증 분석을 연구하였다. 의료분야 처리금액 시계열 자료는 상담 처리금액, 피해 구제금액, 분쟁 조정 처리금액으로 나뉜 3개 변수를 사용하였고 분석에 사용된 시계열 모형은 ARIMA 모형, 벡터 자기회귀 모형 그리고 전이 함수를 이용한 시계열 모형이다. 이들 중 전이 함수를 이용한 시계열 모형이 단기 예측면에서 가장 우수한 예측력을 보였고 벡터자기회귀 모형도 변수간 영향력과 기간을 파악하는데 유용한 정보를 제공하였다.

선형혼합모형을 이용한 유전체 자료분석방안에 대한 연구 (Efficient strategy for the genetic analysis of related samples with a linear mixed model)

  • 임정민;성주헌;원성호
    • Journal of the Korean Data and Information Science Society
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    • 제25권5호
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    • pp.1025-1038
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    • 2014
  • 가족 자료를 활용한 연속형 표현형의 전장유전체분석 (genome-wide association analysis)은 주로 선형혼합모형을 이용하며, 분산공분산행렬은 가족 구성원간의 유전적 거리를 고려하여 결정된다. 그러나 가족 구성원들의 표현형의 유사성은 유전적 요인과 환경적 요인에 의하여 발생함에도 불구하고, 표현형의 유사성은 단지 유전적 요인에 의해서 발생한다고 가정한다. 예를 들어 키의 경우 부부 사이에 양의 상관관계가 존재하나 유전적 요인만 고려하여 독립으로 가정한다. 선형혼합 모형에서 분산공분산 구조를 잘못 가정하는 경우, 검정통계량의 1종 혹은 2종의 오류를 적절히 관리할 수 없다. 본 논문에서는 다양한 유형의 분산공분산구조를 가정할 수 있는 선형혼합모형과 이를 기반으로 한 검정통계량을 제안하였다. 모의실험을 통하여 제안한 방법이 기존의 모형보다 통계적 검정력이 우수함을 확인하였다. 또한 체질량지수 (body mass index; BMI)의 전장유전체 분석에 적용하여 기존에 알려지지 않은 새로운 원인 유전자를 규명하였다.

불임 스트레스 척도 개발에 관한 연구 (A Study on the Development of an Infertility Stress Scale)

  • 김선행;박영주;장성옥
    • 대한간호학회지
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    • 제25권1호
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    • pp.141-155
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    • 1995
  • The objective of this study was to develop a scale to measure stress in infertile couples and to test its reliability and validity. Prior to item generation, a basic decision was made to conceptualize stress in infertile couples as including two dimensions and four subdimensions. The dimensions were, intrapersonal stress including cognitive and affective stress, and interpersonal stress including marital and social stress. Initially 95 items were generated from the inter-view data of 31 primary or secondary infertile women and from a literature review. These items were analyzed through the Index of Content Validity(CVI) and 69 items were selected which met 70% or more of the CVI. This preliminary Infertility Stress Scale were analyzed for reliability and construct validity. Item analysis and factor analysis were applied for construct validity. Forty items were selected through item analysis. This procedure was based on the inter-item correlation matrix, a corrected average inter-item correlation coefficient(.30~.70), a corrected item to total correlation coefficient (.03 or more) and information about the alpha estimate if this item was dropped from the scale. The result of the initial factor analysis including varimax rotation produced eight factors. Five items deleted because of factor complexity(indiscriminate factor loadings). The secondary factor analysis including varimax rotation produced seven factors that coincided with the conceptual framework posed for the scale developed. The seven factors were labeled as ‘meaning of children’,‘worthiness’,‘tenacious linking’,‘marital satisfaction’,‘sexual satisfaction’,‘familial adjustment’ and ‘social adjustment’. The alpha coefficient relating to internal consistency was .93 for reliability The results of this study suggest that the measurement derived from the Infertility Stress Scale is useful in assessing the stress of infertile couples.

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A meso-scale approach to modeling thermal cracking of concrete induced by water-cooling pipes

  • Zhang, Chao;Zhou, Wei;Ma, Gang;Hu, Chao;Li, Shaolin
    • Computers and Concrete
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    • 제15권4호
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    • pp.485-501
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    • 2015
  • Cooling by the flow of water through an embedded cooling pipe has become a common and effective artificial thermal control measure for massive concrete structures. However, an extreme thermal gradient induces significant thermal stress, resulting in thermal cracking. Using a mesoscopic finite-element (FE) mesh, three-phase composites of concrete namely aggregate, mortar matrix and interfacial transition zone (ITZ) are modeled. An equivalent probabilistic model is presented for failure study of concrete by assuming that the material properties conform to the Weibull distribution law. Meanwhile, the correlation coefficient introduced by the statistical method is incorporated into the Weibull distribution formula. Subsequently, a series of numerical analyses are used for investigating the influence of the correlation coefficient on tensile strength and the failure process of concrete based on the equivalent probabilistic model. Finally, as an engineering application, damage and failure behavior of concrete cracks induced by a water-cooling pipe are analyzed in-depth by the presented model. Results show that the random distribution of concrete mechanical parameters and the temperature gradient near water-cooling pipe have a significant influence on the pattern and failure progress of temperature-induced micro-cracking in concrete.

Screening Analysis of 10 Adrenal Steroids by Matrix-Assisted Laser Desorption Ionization-Tandem Mass Spectrometry

  • Kim, Sun-Ju;Jung, Hyun-Jin;Chung, Bong-Chul;Choi, Man-Ho
    • Mass Spectrometry Letters
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    • 제2권3호
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    • pp.69-72
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    • 2011
  • Defective synthesis of the steroid hormones by the adrenal cortex has profound effects on human development and homeostasis. Due to the time-consuming chromatography procedure combined with mass spectrometry, the matrix-assisted laser desorption ionization method coupled to the linear ion-trap tandem mass spectrometry (MALDI-LTQ-MS/MS) was developed for quantitative analysis of 10 adrenal steroids in human serum. Although MALDI-MS can be introduced for its applicability as a high-throughput screening method, it has a limitation on reproducibility within and between samples, which renders poor reproducibility for quantification. For quantitative MALDI-MS/MS analysis, the stable-isotope labeled internal standards were used and the conditions of crystallization were tested. The precision and accuracy were 3.1~35.5% and 83.8~138.5%, respectively, when a mixture of 10 mg/mL ${\alpha}$-cyano-4-hydroxycinnamic acid in 0.2% TFA of 70% acetonitrile was used as the MALDI matrix. The limit of quantification ranged from 5 to 340 ng/mL, and the linearity as a correlation coefficient was higher than 0.988 for all analytes in the calibration range. Clinical applications include quantitative analyses of patients with congenital adrenal hyperplasia. The devised MALDI-MS/MS technique could be successfully applied to diagnosis of clinical samples.

한우의 유전체 표지인자 활용 개체 혈연관계 추정 (Prediction of Genomic Relationship Matrices using Single Nucleotide Polymorphisms in Hanwoo)

  • 이득환;조충일;김내수
    • Journal of Animal Science and Technology
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    • 제52권5호
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    • pp.357-366
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    • 2010
  • 한우의 유전체 전장의 정보를 Illumina BeadArray$^{TM}$ Bovine SNP50 assay를 이용하여 단일염기다형 현상을 조사한 결과, 유전적 다양성을 보이는 좌위가 약 32,567 좌위 이상에서 다양성을 보이고 있었으며 약 5,554 좌위에서 다양성이 조사되지 않았다. 이는 조사된 자료의 가계집단의 수가 크게 제한되었기 때문에 기인될 수 있으며 또 다른 원인으로는 한우 종축집단의 크기가 작을 수 있다는 현상을 반증한다고 사료된다. 유전분석의 기초가 되는 혈통기록에 의한 개체간 혈연관계를 유전체 정보에 의한 혈연관계와 비교하여 본 결과, 유전체 정보에 의한 혈연관계의 크기가 혈통기록에 의한 혈연관계보다 좀 더 정확하게 추정될 수 있다는 장점이 있으며 혈통기록상의 오류로 그릇된 혈연관계의 크기를 유전체 정보를 통하여 보완할 수 있다는 장점이 있다. 이러한 장점을 활용하면 유전체정보를 이용한 유전능력 평가의 정확성을 크게 향상시킬 수 있을 것으로 사료되었다.