• Title/Summary/Keyword: cluster analyses

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Genetic diversity in kiwifruit germplasm evaluated using RAPD and SRAP markers (RAPD와 SRAP 마커를 이용한 참다래 유전자원의 유전적 다양성)

  • Cho, Kang Hee;Kwack, Yong-Bum;Park, Seo Jun;Kim, Se Hee;Lee, Han Chan;Kim, Mi Young
    • Journal of Plant Biotechnology
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    • v.44 no.3
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    • pp.303-311
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    • 2017
  • In this study, random amplified polymorphic DNA (RAPD) and sequence-related amplified polymorphism (SRAP) analyses were used for evaluation of genetic diversity of 61 kiwifruit (Actinidia spp.) germplasms including domestic and overseas collection cultivars. Forty RAPD primers were detected in a total of 230 polymorphic bands with an average of 5.75. Thirty-two SRAP primer combinations were detected in a total of 204 polymorphic bands with an average 6.38. By unweighted pair-group method arithmetic average cluster analysis using 434 polymorphic bands, kiwifruit germplasms were classified in three groups with similarity value of 0.680. Cluster I consisted of 46 kiwifruit germplasms belonging to A. deliciosa, A. chinensis, A. deliciosa ${\times}$ A. arguta, A. chinensis ${\times}$ A. arguta, and A. chinensis ${\times}$ A. deliciosa. Cluster II consisted of seven germplasms belonging to A. arguta and 'Skinny Green', a cultivar derived from a cross between A. arguta and A. deliciosa. Cluster III consisted of seven germplasms belonging to A. rufa, A. hemsleyana, A. macrosperma, A. polygama, and A. eriantha. Genetic similarity values among tested kiwifruit germplasms ranged from 0.479-0.991, and average similarity value was 0.717. Similarity value was highest (0.991) between NHK0038 (A. deliciosa) and NHK0040 (A. deliciosa), and lowest (0.479) between 'Hayward' (A. deliciosa) and K5-1-22 (A. arguta).

Applicability of Particle Crushing Model by Using PFC (PFC를 이용한 입자 파쇄 모델의 적용성 연구)

  • Jeong, Sun-Ah;Kim, Eun-Kyung;Lee, Seok-Won
    • Journal of the Korean Geosynthetics Society
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    • v.9 no.1
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    • pp.47-57
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    • 2010
  • Granular soils having a large particle size have been used as a filling material in the construction of foundation, harbor, dam, and so on. Consequently, the shear behavior of this granular soil plays a key role in respect of stability of structures. For example, soil particle crushing occurring at the interface between structure and soil and/or within soil mass can cause a disturbance of ground characteristics and consequently induce issues in respect of stability of structures. In order to investigate the shear behavior according to an existence and nonexistence of particle crushing, numerical analyses were conducted by using the DEM (Discrete Element Method)-based software program PFC2D (Particle Flow Code). By dividing soil particle bonding model into crushing model and noncrushing model, total four particle bonding models were simulated and their results were compared. Noncrushing model included one ball model and clump model, and crushing model included cluster model and Lobo-crushing model. The combinations of soil particle followed the research results of Lobo-Guerrero and Vallejo (2005) which were composed of eight circles. The results showed that the friction angle was in order of clump model > cluster model > one ball model. The particle bonding model compared to one ball model and noncrushing model compared to crushing model showed higher shear strength. It was also concluded that the model suggested by Lobo-Guerrero and Vallejo (2005) is not appropriate to simulate the soil particle crushing.

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Cluster and Factor Analyses Using Water Quality Data in the Sapkyo Reservoir Watershed (삽교호유역의 수질자료를 이용한 군집분석 및 요인분석)

  • Im, Chang-Su;Sin, Jae-Gi
    • Journal of Korea Water Resources Association
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    • v.35 no.2
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    • pp.149-159
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    • 2002
  • The monthly water quality data measured at 19 stations located in the Sapkyo reservoir watershed were clustered into 2 to 7 clusters and factor analysis was conducted to characterize the water quality, using the information obtained from cluster analysis. The result of cluster analysis shows that Sapkyo reservoir and each stream (Sapkyo stream, Muhan stream and Kokkyo stream) in Sapkyo reservoir watershed hove their own water quality characteristics. The result of water quality analysis indicates that the concentration of suspended solids from Sapkyo reservoir is much higher than those of other streams, and which is probably because of increment of phytoplankton biomass with rich nutrient flowing Into Sapkyo reservoir from the upper stream of watershed. Furthermore, the concentrations of biochemical oxygen demand and chemical oxygen demand were 3.5 to 4.8 times and 1.7 to 2.5 times those of other streams, respectively. The overall water quality of Sapkyo reservoir watershed was considered to exceed eutrophic condition. Based on factor analysis, the water quality characteristics of Sapkyo stream and Muhan stream were closely related with farm land and residence. The water quality of Kokkyo stream was influenced by superabundant organic matter flowing from Chonan city and district wastewater treatment plant located in the upper stream of Kokkyo stream. The water quality factor influencing Sapkyo reservoir was closely related with water quality factors of other three streams.

Understanding the Factors Affecting the Acceptance for Fermented Soybean Products

  • Chung, La-Na;Chung, Seo-Jin
    • Food Science and Biotechnology
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    • v.17 no.1
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    • pp.144-150
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    • 2008
  • The main objective of this study was to understand the factors affecting the acceptance of fermented soybean products. Seventy-six consumers rated the acceptance and perceived intensity of 4 types of Korean and 4 types of Japanese style fermented soybean products. The consumer's food variety seeking tendency and the general attitude toward various fermented soybean products were measured. Ten descriptive analysis panelists evaluated the sensory characteristics of the 8 samples. Univariate and multivariate statistical analyses were applied to the data sets. Fermented soybean products consisting of sweet and moist sensory characteristics were preferred the most. The variety seeking tendency was not an effective predictor for understanding the acceptance of the products tasted in the experiment. K-means cluster analysis identified 3 sub-consumer segments sharing a common preference pattern for the 8 samples within each group. These 3 groups somewhat differed in the consumption frequency, acceptance, and familiarity of various fermented soybean products in general.

Patronage Orientations of Service Facilities and Clothing Purchase Behaviors: A Typology of Department Store Customer Segments (백화점 소비자의 서비스시설 이용성향과 의복구매행동: 시장세분화를 위한 유형 별 분석)

  • 신수임;박경애
    • Journal of the Korean Society of Clothing and Textiles
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    • v.24 no.4
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    • pp.571-582
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    • 2000
  • The purposes of this study were to segment department store customers based on patronage orientations of service facilities in a department store and to develop a profile of each segment using store visit behaviors, clothing purchase behaviors and demographics. A total of 453 responses collected from an on-site questionnaire survey to female department store customers was analyzed. Cluster analysis on patronage orientations of department store service facilities identified four groups including: Active patrons(27.3%); Comparison patrons(27.6%); Convenience seekers(27.3%); and Minimum patrons(17.8%). ANOVA and $\chi$$^2$ analyses revealed significant differences among the four groups on store visit behaviors(the extent of store visits and the extent of service facility visits), clothing purchase behaviors(6 store choice criteria and the extent of clothing purchase), and 5 demographic characteristics. The study developed a profile of each segment and provided marketing implications.

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Appearance Satisfaction of Female Consumers: Toward the Relationships with Appearance Types and Perceptions (여성소비자의 외모만족도: 외모유형과 외모의식과의 관계)

  • 이현옥;박경애
    • Journal of the Korean Home Economics Association
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    • v.38 no.7
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    • pp.93-102
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    • 2000
  • The purposes of this study were to categorize female consumers based on appearance satisfaction and to examine the differences among the categorized groups on appearance types and appearance perceptions (appearance interest, stress related to appearance, and the extent of cosmetics use). A total of 518 responses collected from a questionnaire survey to female consumers was analyzed. Cluster analysis on appearance satisfaction identified four groups including the types of: Feature satisfaction(32%); Skin satisfaction(31%); Dissatisfaction(19%); and Overall satisfaction(16%). Chi-square and ANOVA analyses revealed significant differences among the four groups on the 6 appearance types (face line, face size, skin tone, skin blemish, skin elasticity, and wrinkles) and the stress related to appearance.

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Morphological and Genetic Characterization of Penicillium spp. associated with post - harvest decay of fruits. (oral)

  • Oh, S.Y.;Yu, S.H.
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.115.1-115
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    • 2003
  • Post-harvest decay, caused by Penicillium spp. is a serious problem of fruits worldwide. Morphological characteristics and molecular markers were used to characterize 22 Penicillium isolates from apples, 18 isolates from pears, 60 from oranges and 18 from grapes and 23reference isolates representing related Penicillium spp. to assess their diversity and resolve their taxonomy. Based on morphological and physiological characteristics, the isolates were grouped as identical or very similar to P. digitatum, P. italicum, P. ulaiense or very similar to P. crustosum, P. expansum, P. solitum and unidentified Penicillium spp. Based on sequence comparisons of ITS region, variable site were presented within and among the species, but there variation were not correlated with the species. Cluster analyses of AP-PCR fragment patterns using UP and L45 primer and the -tubulin gene sequence, the Penicillium species were segregated into distinct groups. Particularly. the -tubulin partial sequence data provided support for species concepts based on morphological and physiological characteristics.

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Maternal Conversation Style and Communicative Intent of Young Children during Free Play (자유놀이 상황에 나타난 어머니의 대화 양식과 유아의 의사소통 의도)

  • Sung, Miyoung
    • Korean Journal of Child Studies
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    • v.24 no.5
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    • pp.77-89
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    • 2003
  • The relationship of communicative intent of infants and the conversation style of mothers were investigated with 20 mothers and their 2- and 3-year old children. They conversed in naturalistic settings while playing with Lego blocks. Cluster analyses revealed 2 maternal styles: a conversation-eliciting and a directive style. Children of conversation-eliciting mothers provided more information than those of directive mothers. Children of directive mother requested more permission than those of conversation-eliciting mothers. Implications of these two maternal styles for children's communicative abilities were discussed.

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Patterns of Vertical Distribution and Diel Vertical Migration of Zooplankton in the East Sea of Korea (Sea of Japan)

  • Park, Chul;Lee, Chang-Rae;Hong, Sung-Yun
    • Journal of the korean society of oceanography
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    • v.32 no.1
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    • pp.38-45
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    • 1997
  • To find out the changes in vertical distribution patterns over the 24-h period, a key and the first step to tackle the problem of adaptive significance of diel vertical migration (DVM), vertically stratified time series samplings with multiple opening/closing plankton samplers were done in the East Sea of Korea (Sea of Japan). Sampling was done almost every 4 h for one day period following the same water parcel in Nov. 1995 and May 1996, respectively. Resultant patterns of vertical distribution showed that some species such as most abundant taxa Metridia pacifica and Scolecithyicella minor, both Copepoda, performed DVM even in the study area of strong thermal stratification. Their patterns of DVM such as distance scales and timing of movements were not the same each other, and they were separated from other taxa in the dendrogram obtained by the cluster analyses, Most minor taxa grouped in one, however, seemed not to do DVM in the study area of strong thermal stratification. They usually preferred the warmer surface layer where the foods were probably more abundant.

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Genetic Relationships of Silkworm Stocks in Korea Inferred from Isozyme Analyses (동위효소 다형특성에 의한 누에 품종의 유연관계)

  • 성수일
    • Journal of Sericultural and Entomological Science
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    • v.39 no.2
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    • pp.119-133
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    • 1997
  • Isozyme was used to characterize general protein patterns of genetic relationships among 303 silkworm stocks preserved in National Sericultural and Entomology Research Institute, RDA. Six isozymes (esterase, acid phosphatase, alkaline phosphatase, amylase, glucose-6-phosphate dehydrogenase and sucrase) from hemolymph, midgut, and digestive juice were employed to construct dendograms(UPGMA method) using a polycrylamide gel electrophoresis. A cluster analysis revealed four major group, which were divided into several subgroups within each group, contained assemglages of Japanese and Chinese races. Especially, genetic differentiation in the first and second group was greatest rather than within Japanese and Chinese races repectively and was concordant with the hypothesis of phyletic sorting of initial variability in China many years ago. Hypothesized recent introgression between groups was also plausible, but the eviednce suggested bidirectional gene flow between the Chinese and the Japnaese lineages. Interpreting the results in light of evidence from the current study, the genetic diversity and relationship showed in Korean silkworm race, Hansammyun reflected early and independent evolution from the Chinese ancestor, limited addition of new variability and phyletic sorting within Korean peninsula more than 4,000 years.

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