• Title/Summary/Keyword: bond overlap population

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Molecular Orbital Calculation on the Conflguration of Hydroxyl Group in Hexagonal Hydroxyapatite

  • Chang, Myung-Chul
    • Journal of the Korean Ceramic Society
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    • v.42 no.5 s.276
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    • pp.304-307
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    • 2005
  • The possible configurations of hydroxyl group in hexagonal hydroxyapatite were identified through molecular orbital calculation. The molecular orbital interaction between O and H in hydroxyl column was analyzed using charge variation and Bond Overlap Population (BOP). We supposed 5 kinds of O-H bond configurations as cluster types of I, II, III, IV, and V. Mulliken's population analysis was applied to evaluate ionic charges of O, H, P, and Ca ions, and BOPs (Bond Overlap Populations) in order to discuss the bond strength change by the atomic arrangement. The stability of each O-H bond configuration was analyzed using bond overlap and ionic charge.

A Study on the Electronic Structures of Li Intercalated Vanadium Sulfide and Oxide (Li의 첨가에 따른 Vanadium의 유화물과 산화물의 전자상태계산에 관한 연구)

  • Jung, Hyun-Chul;Kim, Hui-Jin;Won, Dae-Hee;Yoon, Dong-Joo;Kim, Yang-Soo;Kim, Byung-Il
    • Korean Journal of Metals and Materials
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    • v.46 no.9
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    • pp.604-608
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    • 2008
  • The layered compounds vanadium disulfide($VS_2$) and vanadium dioxide($VO_2$) intercalated with Li are investigated for using the Discrete Variational $(DV)-X{\alpha}$ molecular orbital method. The chemical bonding properties of the atoms were examined by bond overlap population of electronic states. The plot of density of states supports the covalent bonding properties by showing the overlap between the atoms. There is a strong tendency of covalent bonding between V-S and V-O. The intensity of covalent bonding of $VS_2$ is stronger than $VO_2$. The net charge of $LiVO_2$ is higher than that of $LiVS_2$. This results of the calculation of $VO_2$ and $VS_2$ indicate that $(DV)-X{\alpha}$ method can be widely applied in the new practical materials.

MO Theoretical Studies on Antitumor Activity of Purine Antimetabolites (퓨린 港代謝物의 抗癌活性에 관한 MO 이론적 연구)

  • Kim Ho Soon;Ikchoon Lee
    • Journal of the Korean Chemical Society
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    • v.27 no.4
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    • pp.239-243
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    • 1983
  • EHMO calculations were performed on several antitumor active as well as inactive purine antimetabolites. Results showed that the N atom (position 9) which corresponds to the position of sugar (position 10) linkage in DNA bases has a net negative charge for antitumor active whereas it has a positive charge for inactive purines. It was also found that overlap population was the smallest for bond between atoms 9 and 10, which agrees with the experimental findings that antitumor activity is effected after conversion to nucleotide level.

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Theoretical Study of the Cobalt Substituting Site in the Framework of $AlPO_{4}-5$ Molecular Sieves

  • Sang Joon Choe;Dong Ho Park;Do Sung Huh
    • Bulletin of the Korean Chemical Society
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    • v.14 no.1
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    • pp.55-58
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    • 1993
  • In order to determine the cobalt substituting site in $AlPO_4-5$ framework, ASED-MO theory has been used. The substitution of cobalt for aluminum is energetically more favorable than that for phasphorous. The stabilized energy of the former is 51 eV lower than that of the latter. The calculated net charge was +1.27 for Al, +0.85 for P, and +1.56 for Co, respectively. The valence electron population (VEP), reduced overlap population (ROP) and net charge for the charged cluster models were compared for $AlPO_4-5$ and $CoAlPO_4-5$ systems. Then, twe find that the covalency of P-O bond was greater than that of Al-O bond.

MO Interpretation for the trans Effect of Square Planar Type Pt(Ⅱ) Complexes (사각평면형 백금(Ⅱ) 착물의 트란스효과에 대한 분자궤도함수론적 해석)

  • Byung-Kak Park;Lee Sang-Hyup;Hwhan-Jin Yeo;Iee-Yeung Cho
    • Journal of the Korean Chemical Society
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    • v.32 no.5
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    • pp.495-500
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    • 1988
  • The trans effect has been interpreted for a series of trans-[PtNH$_3$Cl$_2$2L] (L = H$_2$O, NH$_3$, Cl$^-$, Br$^-$, I$^-$, CH$_3$ and PH$_3$) and PtCl$_4^{-2}$ by means of our modified-EHMO method. The calculation shows that reduced overlap population(ROP) of Pt-N bond trans to L is decreased with a better trans director. That is, the trans effect has been found to be enhanced with a better trans director. Accordingly, it could be interpreted quantum chemically the trans effect for a general trans-PtTL$_2$X complex.

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Application of DV-X$\alpha$ Method to ${\gamma}$-2CaO.SiO$_2$

  • Yamaguchi, Norio;Fujimori, Hirotaka;Ioku, Koji;Goto, Seishi;Nakayasu, Tetsuo
    • The Korean Journal of Ceramics
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    • v.6 no.4
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    • pp.339-342
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    • 2000
  • In the present study, we attempted to apply DV-X$\alpha$ method to expressing the reactivity of materials. The expression of reactivity was discussed by comparison between ${\gamma}$-C$_2$G having hydraulic activity and ${\gamma}$-C$_2$S not having hydraulic activity at normal conditions. It was found that the model cluster used for calculation can finely reproduce the bulk and surface states using with and without point charge, respectively. The hydration state was also represented by placing OH ̄ on the surface of the cluster. It was calculated that the bond strength of the first layer (as surface) was bigger than that of inner layers (as bulk) for ${\gamma}$-C$_2$S while that of the first layer for ${\gamma}$-C$_2$G was smaller than that of inner layers. Subsequently a model in which OH ̄ is coordinated on Ca at the surface was also calculated. The bond strength with OH ̄ was stronger than that without OH ̄, while for ${\gamma}$-C$_2$G the bond strength with OH ̄ was weaker than that without OH ̄. From these results, it is concluded that the hydraulic activity depends on whether the bond strength for hydrated state becomes weaker than that unhydrated state or not.

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The Hydrogen Binding Property Study by Density Functional Theory for Zr, V, Fe and Al (밀도 함수를 이용한 지르코니움, 바나듐, 철과 수소와의 반응성 연구)

  • Park, Taesung;Lee, Taeckhong
    • Transactions of the Korean hydrogen and new energy society
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    • v.25 no.6
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    • pp.602-608
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    • 2014
  • The sequence of bond overlap population of metal hydrogen binding is in Al-H > Fe-H > Zr-H > V-H. This results shows the binding energy of Al-H is the biggest in this metals (Al, Fe, Zr, and V) and hydrogen interaction. The Vanadium-hydrogen binding shows the weakest binding energy compared to other metals and it causes easy hydrogen desorption from the corresponding metals. The net charge of Al-H show the biggest value of 0.2248 and the severe localizations of electrons around aluminum and imply strongest covalent binding nature in these metals. This study is applicable to the purification of hydrogen in other bulk gas.

Nucleophilic Substitution at a Carbonyl Carbon Atom - Part I. MO-Theoretical Studies on Methyl Chloro-and fluoro-formates

  • Lee, Ikchoon
    • Nuclear Engineering and Technology
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    • v.4 no.4
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    • pp.294-300
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    • 1972
  • CNDO/2 and INDO calculations have been carried out on varying geometries of methyl chloro-and fluoro-formates. Results show that the configuration in which halogen atom is trans to methyl group is the most stable. Atomic charges and overlap population show that the trans form is stabilized by conjugation of carbonyl double bend with the unshared pairs of the ether oxygen and by electrostatic attraction of carbonyl oxygen to methyl group. Dipole moments of the trans forms agree reasonably well with the experimental values but showed that any generalizations made with dipole moments from bond moments should be accepted with considerable reservations.

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A Study on Electronic Structures of Spinel-Type Manganese Oxides for Lithium Ion Adsorbent using DV-Xα Molecular Orbital Method (DV-Xα 분자궤도법을 이용한 리튬이온 흡착제용 스피넬형 망간산화물의 전자상태에 관한 연구)

  • Kim, Yang-Su;Jeong, Gang-Seop;Lee, Jae-Cheon
    • Korean Journal of Materials Research
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    • v.12 no.4
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    • pp.274-278
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    • 2002
  • Discrete-variational(DV)-$X{\alpha}$ method was applied to investigate the electronic structures of spinel- type manganese oxide which is well known to the high performance adsorbent or cathode material for lithium ion. The results of DOS(density of states) and Mulliken population analysis showed that Li was nearly fully ionized and interactions between Mn and O were strong covalent bond. The effective charge of Li and Mn was +0.77 and +1.44 respectively and the overlap population between Mn and O was 0.252 in $LiMn_2O_4$. These results from DV-X$\alpha$ method were well coincided with the experimental result by XPS analysis and supported the feasibility of theoretical interpretation for the $LiMn_2O_4$ compound.

The Chemical Bond of Cu Atom in Layer and Chain for Y123 and Y124 Superconductors (Y123 초전도체 및 Y124 초전도체에서 층과 사슬에 존재하는 구리 원자의 화학결합)

  • Man Shick Son;U-Hyon Paek;Lee Kee-Hag
    • Journal of the Korean Chemical Society
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    • v.36 no.4
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    • pp.477-484
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    • 1992
  • Using semiempirical molecular orbital method, ASED-MO of extended Huckel Theory, we were investigated chemical bonds and electronic properties of Cu atom in a chain and a layer for Y123 and Y124 superconductors from VEP (valence electron population), DOS (density of state), and COOP (crystal orbital overlap population). In order to investigate environmental effects of Cu atom for Y123 and Y124 superconductors, we introduced charged cluster models with point charge and without point charge into our calculations. As a result of ASED-MO calculations, the Cu atom in the layer acts as electron acceptor and the Cu atom in the chain acts as electron donor for Y123 and Y124 superconductors. The oxidation state of Cu atom for Y123 and Y124 superconductors without point charge is higher in the chain than in the layer. The oxidation state of Cu atom in the layer for Y123 superconductor is higher than that in the layer for Y124 superconductor. The Cu atom in the layer and the chain for Y123 superconductor does not largely affect on the environmental effect. However, the Cu atom in the layer and the chain for Y124 superconductor does largely affect on it. Also, electron population and chemical bonding of Cu1-O4, Cu2-O4, and Cu1-Cu2 for Y123 superconductor are far different from Y124 superconductor.

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