• 제목/요약/키워드: blast

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그리드 컴퓨팅을 이용한 BLAST 성능개선 및 유전체 서열분석 시스템 구현 (Performance Improvement of BLAST using Grid Computing and Implementation of Genome Sequence Analysis System)

  • 김동욱;최한석
    • 한국콘텐츠학회논문지
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    • 제10권7호
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    • pp.81-87
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    • 2010
  • 본 논문에서는 현재 생물정보학 연구에서 가장 많이 사용하고 있는 BLAST의 문제점을 분석하고 이에 따른 해결책을 제시하기 위하여 그리드 컴퓨팅을 이용한 G-BLAST(Grid Computing을 이용한 Basic Local Alignment Search Tool)를 제안한다. 본 연구에서 제안하고 있는 G-BLAST을 이용한 시스템은 이기종 분산 환경에서 수행이 가능한 서열분석 통합 소프트웨어 패키지이며 기존 서열분석 서비스의 취약점인 검색 성능을 개선하여 BLAST 검색 기능을 강화 하였다. 또한, BLAST 결과를 사용자가 관리 및 분석이 용이하도록 데이터베이스 및 유전체 서열분석 서비스 시스템을 구현하였다. 본 논문에서는 G-BLAST시스템의 성능확인을 위하여 병렬컴퓨팅 성능테스트 기법을 도입하여 구현된 시스템을 기존 BLAST와 속도 및 효율부분에서 비교하여 성능개선을 확인하였으며 서열결과 분석에 필요한 자료를 사용자관점에서 제공해주고 있다.

Outbreak of Rice Blast Disease at Yeoju of Korea in 2020

  • Chung, Hyunjung;Jeong, Da Gyeong;Lee, Ji-Hyun;Kang, In Jeong;Shim, Hyeong-Kwon;An, Chi Jung;Kim, Joo Yeon;Yang, Jung-Wook
    • The Plant Pathology Journal
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    • 제38권1호
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    • pp.46-51
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    • 2022
  • Rice blast is the most destructive disease threatening stable rice production in rice-growing areas. Cultivation of disease-resistant rice cultivars is the most effective way to control rice blast disease. However, the rice blast resistance is easy to breakdown within years by blast fungus that continually changes to adapt to new cultivars. Therefore, it is important to continuously monitor the incidence of rice blast disease and race differentiation of rice blast fungus in fields. In 2020, a severe rice blast disease occurred nationwide in Korea. We evaluated the incidence of rice blast disease in Yeoju and compared the weather conditions at the periods of rice blast disease in 2019 and 2020. We investigated the races and avirulence genes of rice blast isolates in Yeoju to identify race diversity and genetic characteristics of the isolates. This study will provide empirical support for rice blast control and the breeding of blast-resistant rice cultivars.

NBLAST: a graphical user interface-based two-way BLAST software with a dot plot viewer

  • Choi, Beom-Soon;Choi, Seon Kang;Kim, Nam-Soo;Choi, Ik-Young
    • Genomics & Informatics
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    • 제20권3호
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    • pp.36.1-36.6
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    • 2022
  • BLAST, a basic bioinformatics tool for searching local sequence similarity, has been one of the most widely used bioinformatics programs since its introduction in 1990. Users generally use the web-based NCBI-BLAST program for BLAST analysis. However, users with large sequence data are often faced with a problem of upload size limitation while using the web-based BLAST program. This proves inconvenient as scientists often want to run BLAST on their own data, such as transcriptome or whole genome sequences. To overcome this issue, we developed NBLAST, a graphical user interface-based BLAST program that employs a two-way system, allowing the use of input sequences either as "query" or "target" in the BLAST analysis. NBLAST is also equipped with a dot plot viewer, thus allowing researchers to create custom database for BLAST and run a dot plot similarity analysis within a single program. It is available to access to the NBLAST with http://nbitglobal.com/nblast.

발파 진동 평가의 문제점과 개선방안 (Comparison of Assessment method of Blast Vibration)

  • Chang, Seo-Il;Lee, Jae-Won;Kim, Hyung-Kon
    • 한국소음진동공학회:학술대회논문집
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    • 한국소음진동공학회 2002년도 추계학술대회논문초록집
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    • pp.357.2-357
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    • 2002
  • The blast vibration can generate occupants dissatisfy as well as damage of physics nearby building. Then blast vibration estimation issue important problems. But, now blast vibration prediction inside-outside country not established objective method according to blast number to express magnitude of vibration. In this study, Our propoes show our country problem of blast vibration about blast vibration measurement and this problems be able to find improve method. (omitted)

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적응 변조 시스템에서 최적의 터보 부호화된 V-BLAST 기법의 성능 분석 (Performance Analysis of the Optimal Turbo Coded V-BLAST technique in Adaptive Modulation System)

  • 이경환;최광욱;류상진;강민구;홍대기;유철우;황인태;김철성
    • 한국정보통신학회논문지
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    • 제11권2호
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    • pp.385-391
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    • 2007
  • 본 논문에서는 V-BLAST (Vertical-Bell-lab Layered Space Time)의 두 디코딩 과정인 ordering과 slicing에 사전 확률 (a priori probability)로 사용하기 위해서 반복 디코딩 (iterative decoding)을 사용한 MAP (Maximum A Posteriori) 디코더의 외부 정보 (extrinsic information)를 이용한 최적의 터보 부호화된 (Turbo Coded) V-BLAST 기법을 적용한 적응 변조 시스템 (adaptive modulation system)을 제시 후 성능을 관찰한다. 또한 적응 변조 시스템에서 간단하게 V-BLAST 시스템과 터보 부호화 (Turbo Coding) 기법이 결합된 기존의 터보 부호화된 V-BLAST 기법을 적용한 경우에 비하여 어느 정도 전송률 (throughput)향상이 있는가를 살펴본다. 실험결과, 적응 변조 시스템에서 최적의 터보 부호화된 V-BLAST 기법을 적용한 경우가 기존의 터보 부호화된 V-BLAST 기법을 적용한 경우에 비하여 전송률 성능이 우수함을 보였다. 특히, 실험 결과는 2.5 Mbps의 전송률에서 1.5 dB의 SNR 이득을 보인다.

각형 출입구를 갖는 방호터널의 방폭밸브에 미치는 폭압 평가 (Blast Overpressure Evaluation for Blast Valves in Protective Tunnels with Rectangular-Shaped Tunnel Entrances)

  • 방승기;신진원
    • 한국지열·수열에너지학회논문집
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    • 제17권4호
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    • pp.79-90
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    • 2021
  • This paper presents a study to reduce the effect of blast pressure on the blast valves installed in protection tunnels, where the shape of the tunnel entrance and the blast pocket is optimized based on the predetermined basic shape of the protective tunnels. The reliability of the numerical tunnel models was examined by performing analyses of mesh convergence and overpressure stability and with comparison to the data in blast-load design charts in UFC 3-340-02 (DoD, 2008). An optimal mesh size and a stabilized distance of overpressure were proposed, and the numerical results were validated based on the UFC data. A parametric study to reduce the blast overpressures in tunnel was conducted using the validated numerical model. Analysis was performed applying 1) the entrance slope of 90, 75, 60, and 45 degrees, 2) two blast pockets with the depth 0.5, 1.0, and 1.5 times the tunnel width, 3) the three types of curved back walls of the blast pockets, and 4) two types of the upper and lower surfaces of the blast pockets to the reference tunnel model. An optimal solution by combining the analysis results of the tunnel entrance shape, the depth of the blast pockets, and the upper and lower parts of the blast pockets was provided in comparison to the reference tunnel model. The blast overpressures using the proposed tunnel shape have been reduced effectively.

복합 재료 폭파 방화벽 실험 연구 (Study on the Composite Blast Wall Test)

  • 양현정;강영종
    • 복합신소재구조학회 논문집
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    • 제1권4호
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    • pp.6-12
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    • 2010
  • This study investigates how to apply composite material to the blast loading protection devices, mainly used for military purpose. Traditionally, earth-filled blast walls have been used for protecting important parts of military facilities and personnels. However these types of blast walls show difficulty in fabrication and portability because of their nature of heavy weight. Composite materials are known to have relatively higher specific stiffness and strength than any other metallic and earth-filled materials such as sand and gravels. Totally 4 times of TNT blast experiments were performed on the carbon/epoxy blast walls. After the end of each test, the improvement of blast wall was implemented to the structure. The test results show that the use of composite material in the blast protecting area is the one of very effective and reliable alternatives.

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폭압에 의한 방폭문의 구조적 안정성에 대한 연구 (A Study On Structural Stability Of Blast Door by Blast Pressure)

  • 김남혁;박관진;이근오
    • 한국안전학회지
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    • 제31권3호
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    • pp.8-15
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    • 2016
  • The purpose of this study is to design a model with the structural stability so as not to lose the operational function due to structural plastic or fail of a sliding blast door by blast pressure to this aim, a numerical simulation was performed using full-size experiments and M&S (Modeling & Simulation) of the sliding blast door. The sliding blast door ($W3,000{\times}H2,500mm$) under the blast load is in the form of a sliding type 2-way metal grill, which was applied by a design blast pressure (reflected pressure $P_r$) of 17 bar. According to the experimental results of a real sliding blast door under blast load, the blast pressure reached the sliding blast door approximately 4.3 ms after the explosion and lasted about 4.0 ms thereafter. The maximum blast pressure($P_r$) was 347.7 psi (2,397.3 kPa), it is similar to the UFC 3-340-02 of Parameter(91 %). In addition, operation inspection that was conducted for the sliding blast door after real test showed a problem of losing the door opening function, which was because of the fail of the Reversal Bolt that was installed to prevent the shock due to rebound of the blast door from the blast pressure. According to the reproduction of the experiment through M&S by applying the blast pressure measurement value of the full-size experiments, the sliding blast door showed a similar result to the full-size experiment in that the reversal bolt part failed to lose the function. In addition, as the pressure is concentrated on the failed reversal bolt, the Principal Tensile Failure Stress was exceeded in only 1.25 ms after the explosion, and the reversal bolt completely failed after 5.4 ms. Based on the result of the failed reversal bolt through the full-size experiment and M&S, the shape and size of the bolts were changed to re-design the M&S and re-analyze the sliding blast door. According to the M&S re-analysis result when the reversal bolt was designed in a square of 25 mm ($625mm^2$), the maximum pressure that the reversal bolt receives showed 81% of the principal tensile failure stress of the material, in plastic stage before fail.

고로슬래그 골재를 사용한 다공성 콘크리트의 물리·역학적 특성에 미치는 고로슬래그 미분말, 황토 및 보강섬유의 효과 (Effect of Blast Furnace Slag, Hwang-toh and Reinforcing Fibers on The Physical and Mechanical Properties of Porous Concrete Using Blast Furnace Slag Coarse Aggregate)

  • 이진형;박찬기
    • 한국농공학회논문집
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    • 제52권5호
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    • pp.53-60
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    • 2010
  • The effects of blast furnace slag, hwang-toh, and reinforcing fiber on the physical and mechanical properties of porous concrete using blast furnace slag coarse aggregates have been evaluated in this study. The effect of the depending on replacement ratio of blast furnace slag to cement was investigated such that the replacement ratio was varied to 0 %, 25 % and 50 %. Also, the replacement ratios of hwang-toh were 0, 20 and 30 %. The polyvinyl alcohol fiber was used for the reinforcing fiber. A series of pH, unit mass, and void ratio tests have been performed to study the physical properties of the porous concrete using blast furnace slag coarse aggregates with the polyvinyl alcohol fiber and the replacement ratios of blast furnace slag, hwang-toh, while a series of compressive tests have been performed to evaluate the strength property depending on polyvinyl alcohol fiber and the replacement ratios of blast furnace slag, hwang-toh. The test results indicated that the physical and mechanical properties of porous concrete using blast furnace slag coarse aggregates is affected by the replacement ratio of blast furnace slag, and the fiber contents. According to the tests with polyvinyl alcohol fiber contents, the void ratio was decreased and the compressive strength was upgraded.

공간 다이버시티 및 인터리빙 주파수 다이버시티 기반 BLAST-OFDM 시스템 (An Enhanced BLAST-OFDM System With Spatial Diversity and interleaved Frequency Diversity)

  • 황현정;김낙명
    • 한국통신학회논문지
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    • 제29권8C호
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    • pp.1040-1046
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    • 2004
  • BLAST-OFDM 시스템은 미래 이동통신 시스템에서 고속의 멀티미디어 데이터 서비스를 위한 효율적인 전송기술이다. 본 논문에서는 BLAST-OFDM 시스템에 적용 가능한 선형 사전부호화 기법 및 전송 다이버시티를 극대화하기 위한 안테나-부채널 할당 알고리듬을 제안하였다. 제안된 알고리듬은 임의의 송수신 안테나 셋에 대하여, 최대한의 공간 다이버시티 이득과, 인터리빙 주파수 다이버시티 이득을 얻을 수 있다. 특히, 제안된 사전부호화 방식은 정보 심볼 서브셋을 과잉 없는 선형 성상 구조를 통하여 분산하고 있으므로 기존의 다른 부호화 기법과는 달리 데이터 전송률의 손실을 가져오지 않는다. 제안된 알고리듬을 적용할 경우 기존의 BLAST-OFDM 대비 4-5㏈ 이상의 성능 개선이 있음을 증명하였다.