• 제목/요약/키워드: biological model

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미세조류 생물반응기 시스템의 민감도분석을 위한 최적입력설계 및 모델예측제어 (Sensitivity Analysis with Optimal Input Design and Model Predictive Control for Microalgal Bioreactor Systems)

  • 유성진;오세규;이종민
    • Korean Chemical Engineering Research
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    • 제51권1호
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    • pp.87-92
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    • 2013
  • 미세조류는 바이오연료를 생산하기 위해 필요한 성분인 지방질의 생산성이 우수하기 때문에 바이오연료의 유망한 원료로서 최근 많은 주목을 받고 있다. 본 연구에서는, 이러한 미세조류의 성장 속도와 미세조류 내부의 지방의 함량이 최대가 되도록 하기 위한 목적으로, 미세조류의 성장과 지방의 생성을 설명하는 제일원리(first principle)에 근거한 상미분방정식(ODE) 모델에 대하여 조사하였다. 모델은 6개의 상태변수와 12개의 파라미터로 이루어져 있으며, 미세조류의 성장을 영양분의 흡수와 흡수된 영양분에 의한 성장으로 두 단계로 나누어 설명한 Droop 모델의 가정을 따른다. 본 연구에서는 민감도 분석(Sensitivity analysis)을 위한 최대의 정보를 줄 수 있는 입력 신호를 결정하기 위해 D-optimality criterion을 이용한 최적 입력 설계(Optimal input design)를 수행하였으며, 구하여진 입력 신호를 적용하여 민감도 분석을 수행하여 모델에 좀 더 중요한 파라미터를 결정하였다. 또한 미세조류의 성장속도와 지방의 함량이 최대가 되도록 하기 위하여 모델 예측 제어(MPC)를 수행하였다.

고분자 구동체를 이용한 손가락 외골격기구의 설계 및 동력학적 모델 개발 (Dynamic Modeling and Design of Finger Exoskeleton Using Polymer Actuator)

  • 정광훈;김윤정;윤벼리;왕혁식;송대석;김슬기;이계한;조재영;김동민;이수진
    • 한국정밀공학회지
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    • 제29권7호
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    • pp.717-722
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    • 2012
  • This paper presents the design and dynamic model of the finger exoskeleton actuated by Ionic Polymer Metal Composites (IPMC) to assist a tip pinch task. Although this exoskeleton will be developed to assist 3 degree-of-freedom motion of each finger, it has been currently made to perform the tip pinch task using 1 degree-of-freedom mechanism as the first step. The six layers of IPMC were stacked in parallel to increase the low actuation force of IPMC. In addition, the finger dummy was manufactured to evaluate the performance of the finger exoskeleton. The pinch task experiments, which were performed on the finger dummy with the developed exoskeleton, showed that the pinch force close to the desired level was obtained. Moreover, the dynamic model of the exoskeleton and finger dummy was developed in order to perform the various analyses for the improvement of the exoskeleton.

허혈-재관류 유도 SH-SY5Y 모델에서 미토콘드리아 매개 Apoptosis 기전 제어를 통한 초석잠 추출물의 세포보호 효과 (Stachys sieboldii M iq. Protects SH-SY5Y Cells Against Oxygen-Glucose Deprivation/Reoxygenation-Induced Injury by Inhibition of Mitochondrion-Mediated Apoptosis Pathway)

  • 정진우;안은정;김철환;신수영;이승영;최경민;이창민
    • 한국자원식물학회:학술대회논문집
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    • 한국자원식물학회 2021년도 춘계학술대회
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    • pp.57-57
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    • 2021
  • Oxygen glucose deprivation/re-oxygenation (OGD/R) induces neuronal injury via mechanisms that are believed to mimic the pathways associated with brain ischemia. Stachys sieboldii Miq. (Chinese artichoke), which has been extensively used in oriental traditional medicine to treat of ischemic stroke; however, the role of S. sieboldii Miq. (SSM) in OGD/R induced neuronal injury is not yet fully understood. The present research is aimed to investigate the protective effect and possible mechanisms of SSM extract treatment in an in vitro model of OGD/R to simulate ischemia/reperfusion Injury. Pretreatment of these cells with SSM significantly attenuated OGD/R-induced production of reactive oxygen species (ROS) by increasing GPx, SOD, and decreasing MDA. SSM decreased mitochondrial damage caused by OGD/R injury and inhibited the release of cyt-c from mitochondrion to cytoplasm in SH-SY5Y cells. Furthermore, neuronal cell apoptosis caused by OGD/R injury was inhibited by SSM, and SSM could decrease apoptosis by increasing ratio of Bcl-2/Bax and inhibiting caspase signaling pathway in SH-SY5Y cells. SSM demonstrated a neuroprotective effect on the simulated cerebral ischemia in vitro model, and this effect was the inhibition of mitochondria-mediated apoptosis pathway by scavenging of ROS generation. Therefore, SSM may be a promising neuroprotective strategy against ischemic stroke.

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인간의 성 반응에 대한 모델 (Models of Sexual Response in Humans)

  • 최인광
    • 생물정신의학
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    • 제20권3호
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    • pp.66-73
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    • 2013
  • Sexual behavior is crucial in life, yet comparatively little is known about the mechanisms in the sexual response in humans. A lot of theories and models have been developed to explain about the process of the sexual response in humans. The first model of sexual function was described by Masters and Johnson, defined the four-phase model (phases of excitation, plateau, orgasm and resolution). Helen Kaplan proposed a slightly different model of human sexual response by adding the conception of the desire phase. Some years later, a new model of circular sexual response pattern was described by Whipple and Brash-McGreer, who acknowledged the cyclic nature of women's sexual response. Basson presented an alternative model of women's normative sexual function, which featured a responsive form of desire in women's sexual response. Bancroft developed a new theoretical model, the Dual Control Model, which postulates sexual response and arousal is ultimately determined by the balance between the sexual activation or excitation system and the sexual inhibition system. The Sexual Tipping Point is a model created by Perelman, suggesting that a sexual response is determined by a balance between excitatory or inhibitory factors that may be psychological, organic, psychosocial, or cultural. A comprehensive understanding of sexual response and function is of paramount importance for the psychiatrist to study sex, offer counseling to the patient on sex, and practice sex therapy. In this literature, models of sexual response would be reviewed to understand the knowledge of the sexual functioning in humans.

발생모델의 진화를 위한 DNA 코딩방법 (DNA Coding Method for Evolution of Developmental Model)

  • 심귀보;이동욱
    • 대한전자공학회:학술대회논문집
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    • 대한전자공학회 1999년도 하계종합학술대회 논문집
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    • pp.464-467
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    • 1999
  • Rapid progress in the modeling of biological structures and simulation of their development has occurred over the last few years. Cellular automata (CA) and Lindenmayer-system(L-system) are the representative models of development/morphogenesis of multicellular organism. L-system is applied to the visualization of biological plant. Also, CA are applied to the study of artificial life and to the construction of an artificial brain. To design the L-system and CA automatically, we make this model evolve. It is necessary to code the developmental rules for evolution. In this paper, we propose a DNA coding method for evolution the models of development/morphogenesis of biological multicellular organisms. DNA coding has the redundancy and overlapping of gene and is apt for the representation of the rule. In this paper, we propose the DNA coding method of CA and L-system.

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Characterizations and Release Behavior of Poly [(R)-3-hydroxy butyrate]-co-Methoxy Poly(ethylene glycol) with Various Block Ratios

  • Jeong, Kwan-Ho;Kwon, Seung-Ho;Kim, Young-Jin
    • Macromolecular Research
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    • 제16권5호
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    • pp.418-423
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    • 2008
  • Poly[(R)-3-hydroxy butyrate] (PHB) and methoxy poly(ethylene glycol) (mPEG) were conjugated by the transesterification reaction with tin(II)-ethylhexanoate (Sn(Oct)-II) as a catalyst. Hydrophobic PHB and hydrophilic mPEG formed an amphiphilic block copolymer which was formed with the self-assembled polymeric micelle in aqueous solution. In this study, we tried to determine the optimum ratio of hydrophobic/hydrophilic segments for controlled drug delivery. The particle size and shape of the polymeric micelle were measured by atomic force microscopy (AFM) and transmission electron microscopy (TEM). Their size were 61-102 nm with various block ratios. Griseofulvin was loaded in the polymeric micelle as a hydrophobic model drug. The loading efficiency and release profile were measured by high performance liquid chromatography (HPLC). The model drug in our system was constantly released for 48 h.

Nonlocal heat conduction approach in biological tissue generated by laser irradiation

  • Abbas, Ibrahim A.;Abdalla, Aboelnour;Sapoor, Hussien
    • Advances in materials Research
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    • 제11권2호
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    • pp.111-120
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    • 2022
  • A novel nonlocal model with one thermal relaxation time is presented to investigates the thermal damages and the temperature in biological tissues generated by laser irradiations. To obtain these models, we used the theory of the non-local continuum proposed by Eringen. The thermal damages to the tissues are assessed completely by the denatured protein ranges using the formulations of Arrhenius. Numerical results for temperature and the thermal damage are graphically presented. The effects nonlocal parameters and the relaxation time on the distributions of physical fields for biological tissues are shown graphically and discussed.

Simulation of Soil Hydrological Components in Chuncheon over 30 years Using E-DiGOR Model

  • Aydin, Mehmet;Jung, Yeong-Sang;Yang, Jae-E.;Lee, Hyun-Il;Kim, Kyung-Dae
    • 한국토양비료학회지
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    • 제45권4호
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    • pp.484-491
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    • 2012
  • The hydrological components of a sandy loam soil of nearly level in Chuncheon over 30 years were computed using the E-DiGOR model. Daily simulations were carried out for each year during the period of 1980 to 2009 using standard climate data. Reference evapotranspiration and potential soil evaporation based on Penman-Montheith model were higher during May to August because of the higher atmospheric evaporative demand. Actual soil evaporation was mainly found to be a function of the amount and timing of rainfall, and presumably soil wetness in addition to atmospheric demand. Drainage was affected by rainfall and increased with a higher amount of precipitation and soil water content. Excess drainage occurred throughout rainy months (from July to September), with a peak in July. Therefore, leaching may be a serious problem in the soils all through these months. The 30-year average annual reference evapotranspiration and potential soil evaporation were 951.5 mm and 714.2 mm, respectively. The actual evaporation from bare soil varied between 396.9-528.4 mm and showed comparatively lesser inter-annual variations than drainage. Annual drainage rates below 120 cm soil depth ranged from 477.8 to 1565.9 mm. The long-term mean annual drainage-loss was approximately two times higher than actual soil evaporation.

마이크로어레이 유전자 발현 자료에 대한 군집 방법 비교 (Comparison of clustering methods of microarray gene expression data)

  • 임진수;임동훈
    • Journal of the Korean Data and Information Science Society
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    • 제23권1호
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    • pp.39-51
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    • 2012
  • 군집분석은 마이크로어레이 발현자료에서 유전자 혹은 표본들의 유사한 특성을 갖는 연관구조를 조사하는데 중요한 도구이다. 본 논문에서는 마이크로어레이 자료에서 계층적 군집방법, K-평균법, PAM (partitioning around medoids), SOM (self-organizing maps) 그리고 모형기반 군집방법 들의 성능을 3가지 군집 타당성 측도인 내적 측도, 안정적 측도 그리고 생물학적 측도를 가지고 비교분석하고자 한다. 모의실험을 통해 생성된 자료와 실제 SRBCT (small round blue cell tumor) 자료를 가지고 여러 가지 군집방법들의 성능을 비교하였으며 그 결과 모의실험 자료에서는 거의 모든 방법들이 3가지 군집측도에서 원래 자료와 일치하는 좋은 군집 결과를 나타내었고 SRBCT 자료에서는 모의실험 자료처럼 명확한 군집화 결과를 보여주지는 않으나 내적측도의 실루엣 너비 (Silhouette width) 관점에서는 PAM 방법, SOM, 모형기반 군집방법 그리고 생물학적 측도에서는 PAM 방법과 모형기반 군집방법이 모의실험 결과와 비슷한 결과를 얻었고 안정적 측도에서 모형기반 군집방법이 다른 방법들보다 좋은 군집결과를 보여주었다.