• Title/Summary/Keyword: binary vector

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Genetic Transformation of Microtuber Disk of Potato(Solanum Tuberosum) by Agrobacterium Tumefaciens (Agrobacterium tumefaciens에 의한 Microtuber 감자 (Solanum tuberosum) 절편(切片)의 유전적(遺傳的) 형질전환(形質轉換)에 관한 연구(硏究))

  • Lee, Young Bok;Seong, Bong Jae;Lee, Eun Gyoung;Lee, Ki Won;Choi, Kwan Sam
    • Korean Journal of Agricultural Science
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    • v.20 no.2
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    • pp.133-144
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    • 1993
  • Calli were induced on microtuber disks of potato(S.tuberosum) infected with three binary vectors transconjugated with C58, A281 and LBA 4404 of Agrobacterium tumefaciens and pBI121. The frequency inducing callus was the highest by infection of C121 carrying pC58 and pBI121, and shoots were differentiated on the calli without any hormonal application. Transformed calli were selected by their resistance to kanamycin and identified by GUS activity. The frequency of callus formation by infection of binary vector strain was affected according to the hormonal application.

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A Study on Optimization of Support Vector Machine Classifier for Word Sense Disambiguation (단어 중의성 해소를 위한 SVM 분류기 최적화에 관한 연구)

  • Lee, Yong-Gu
    • Journal of Information Management
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    • v.42 no.2
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    • pp.193-210
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    • 2011
  • The study was applied to context window sizes and weighting method to obtain the best performance of word sense disambiguation using support vector machine. The context window sizes were used to a 3-word, sentence, 50-bytes, and document window around the targeted word. The weighting methods were used to Binary, Term Frequency(TF), TF ${\times}$ Inverse Document Frequency(IDF), and Log TF ${\times}$ IDF. As a result, the performance of 50-bytes in the context window size was best. The Binary weighting method showed the best performance.

Agroinfiltration-based Potato Virus X Replicons to Dissect the Requirements of Viral Infection

  • Park, Sang-Ho;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • v.22 no.4
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    • pp.386-390
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    • 2006
  • Extensive research of the Potato virus X(PVX) has been performed in in vitro transcription system using the bacteriophage T7 promoter. We constructed an efficient T-DNA based binary vector, pSNU1, and modified vectors carrying PVX replicons. The suitability of the construct to transiently express PVX RNA using Agrobacterium tumefaciens was tested by analysis of infectivity in plants. The expressed PVX RNA was infectous and systemically spread in three plant species including Nicotiana benthamiana, N. tabacum cv. Xanthi-nc, and Capsicum annuum cv. Chilsungcho. The PVX full length construct, pSPVXp31, was caused severe mosaic symptoms on N. benthamiana, severe necrotic lesions on C. annuum while milder symptoms and delayed mosaic symptoms were appeared on the systemic leaves on N. tabaccum. RT-PCR analysis confirmed the presence of PVX RNAs on both inoculated and systemic leaves in all three plant species tested. Our results indicated that PVX replicons were efficiently expressed PVX RNA in at least three tested species. Further investigation win be needed to elucidate the mechanism of PVX replication, translation, movement and assembly/disassembly processes.

Efficient Transformation of Trifolium repens L. Using Acetosyringone (Acetosyringone을 이용한 효율적인 White Clover의 형질전환)

  • TaeHoKwon
    • Korean Journal of Plant Resources
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    • v.10 no.2
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    • pp.107-113
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    • 1997
  • Transformants of White Clover(Trifolium repens L.) were efficiently produced from immature seed derived callus cocultivated with Agrobacterium twnefaciens LBA4404 harboring plant binary vector. pBI121, using acetosyringone. The mean frequencies of transformants on the two kanamycin-containing media were 16 to 19% when the immature seed-derived calli were infected with bacteria cultured in the presence of 100$\mu$M acetosyringone compared with 7% in media without acetosyringone. Transgenic white clover was subject to molecular analysis for integration into plant nuclear genome and expression of $\beta$-glucuronidase(GUS) gene. PCR and Northern blot analyses demonstrated that GUS gene was integrated into white clover nuclear genome and expressed into its mRNA. The expression of GUS gene into its protein was confirmed by spectrophotometric assay of GUS activity.

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Single Somatic Embryogenesis from Transformant with Proteinase II Gene in Panax ginseng C.A. Meyer

  • Yang, Deok-Chun;Kim, Se-Young;Rho, Yeong-Deok;Kim, Moo-Sung
    • Plant Resources
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    • v.6 no.3
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    • pp.205-210
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    • 2003
  • Ginseng(Panax ginseng C.A. Meyer) is a perennial herbaceous plant which grows very slowly. It takes about 3 to 4 years from seeding to collecting the ripe seeds and the ginseng propagation is very difficult. and so, it is very difficult to breed ginseng plant. Ginseng tissue culture was started from at 1960, and ginseng commercial product by in vitro callus culture was saled, however upto now, regenerants were not planted to soil normally. Recently, plant genetic engineering to produce transgenic plants by introducing useful genes has been advanced greatly. In a present paper, transformation of ginseng plants was achieved by co-cultivation with Agrobacterium harboring the binary vector coding Proteinase-II gene, which confer resistant or tolerant to insect pests, The binary vector for transformation was constructed with disarmed Ti-plasmid and with double 35S promoter. The NPT II gene and introduced genes of the transgenic ginseng plants were successfully identified by the PCR. Especially the transgenic ginseng plants were regenerated using new techniques such as repetitive single somatic embryogenesis.

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A Watermarking Scheme for Shapefile-Based GIS Digital Map Using Polyline Perimeter Distribution

  • Huo, Xiao-Jiao;Lee, Suk-Hwan;Kwon, Seong-Geun;Moon, Kwan-Seok;Kwon, Ki-Ryong
    • Journal of Korea Multimedia Society
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    • v.14 no.5
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    • pp.595-606
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    • 2011
  • This paper proposes a robust watermarking scheme for GIS digital map by using the geometric properties of polyline and polygon, which are the fundamental components in vector data structure. In the proposed scheme, we calculate the lengths and the perimeters of all polylines and polygons in a map and cluster them to a number of groups. Then we embed the binary watermark by changing the mean of lengths and perimeters in an embedding group. For improving the safety and robustness, we permute the binary watermark through PRNS(pseudo-random number sequence) processing and embed it repeatedly in a model. Experimental results verified that our scheme has a good invisibility, safety and robustness to various geometric attacks and also our scheme needs not the original map in the extracting process of watermark.

Improved Feature Selection Techniques for Image Retrieval based on Metaheuristic Optimization

  • Johari, Punit Kumar;Gupta, Rajendra Kumar
    • International Journal of Computer Science & Network Security
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    • v.21 no.1
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    • pp.40-48
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    • 2021
  • Content-Based Image Retrieval (CBIR) system plays a vital role to retrieve the relevant images as per the user perception from the huge database is a challenging task. Images are represented is to employ a combination of low-level features as per their visual content to form a feature vector. To reduce the search time of a large database while retrieving images, a novel image retrieval technique based on feature dimensionality reduction is being proposed with the exploit of metaheuristic optimization techniques based on Genetic Algorithm (GA), Extended Binary Cuckoo Search (EBCS) and Whale Optimization Algorithm (WOA). Each image in the database is indexed using a feature vector comprising of fuzzified based color histogram descriptor for color and Median binary pattern were derived in the color space from HSI for texture feature variants respectively. Finally, results are being compared in terms of Precision, Recall, F-measure, Accuracy, and error rate with benchmark classification algorithms (Linear discriminant analysis, CatBoost, Extra Trees, Random Forest, Naive Bayes, light gradient boosting, Extreme gradient boosting, k-NN, and Ridge) to validate the efficiency of the proposed approach. Finally, a ranking of the techniques using TOPSIS has been considered choosing the best feature selection technique based on different model parameters.

LS-SVM for large data sets

  • Park, Hongrak;Hwang, Hyungtae;Kim, Byungju
    • Journal of the Korean Data and Information Science Society
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    • v.27 no.2
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    • pp.549-557
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    • 2016
  • In this paper we propose multiclassification method for large data sets by ensembling least squares support vector machines (LS-SVM) with principal components instead of raw input vector. We use the revised one-vs-all method for multiclassification, which is one of voting scheme based on combining several binary classifications. The revised one-vs-all method is performed by using the hat matrix of LS-SVM ensemble, which is obtained by ensembling LS-SVMs trained using each random sample from the whole large training data. The leave-one-out cross validation (CV) function is used for the optimal values of hyper-parameters which affect the performance of multiclass LS-SVM ensemble. We present the generalized cross validation function to reduce computational burden of leave-one-out CV functions. Experimental results from real data sets are then obtained to illustrate the performance of the proposed multiclass LS-SVM ensemble.

Speaker Verification System Using Support Vector Machine with Genetic Algorithms (유전자 알고리즘을 결합한 Support Vector Machine의 화자인증에서의 성능분석)

  • 최우용;이경희;반성범
    • Proceedings of the IEEK Conference
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    • 2003.11a
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    • pp.557-560
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    • 2003
  • Voice is one of the promising biometrics because it is one of the most convenient ways human would distinguish someone from others. The target of speaker verification is to divide the client from imposters. Support Vector Machine(SVM) is in the limelight as a binary classifier, so it can work well in speaker verification. In this paper, we combined SVM with genetic algorithm(GA) to reduce the dimensionality of input feature. Experiments were conducted with Korean connected digit database using different feature dimensions. The verification accuracy of SVM with GA is slightly lower than that of SVM, but the proposed algorithm has greater strength in the memory limited systems.

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A New Kernelized Approach to Recommender System (커널 함수를 도입한 새로운 추천 시스템)

  • Lee, Jae-Hun;Hwang, Jae-Pil;Kim, Eun-Tai
    • Journal of the Korean Institute of Intelligent Systems
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    • v.21 no.5
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    • pp.624-629
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    • 2011
  • In this paper, a new kernelized approach for use in a recommender system (RS) is proposed. Using a machine learning technique, the proposed method predicts the user's preferences for unknown items and recommends items which are likely to be preferred by the user. Since the ratings of the users are generally inconsistent and noisy, a robust binary classifier called a dual margin Lagrangian support vector machine (DMLSVM) is employed to suppress the noise. The proposed method is applied to MovieLens databases, and its effectiveness is demonstrated via simulations.