• 제목/요약/키워드: available lysine

검색결과 72건 처리시간 0.024초

Classification of HDAC8 Inhibitors and Non-Inhibitors Using Support Vector Machines

  • Cao, Guang Ping;Thangapandian, Sundarapandian;John, Shalini;Lee, Keun-Woo
    • Interdisciplinary Bio Central
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    • 제4권1호
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    • pp.2.1-2.7
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    • 2012
  • Introduction: Histone deacetylases (HDAC) are a class of enzymes that remove acetyl groups from ${\varepsilon}$-N-acetyl lysine amino acids of histone proteins. Their action is opposite to that of histone acetyltransferase that adds acetyl groups to these lysines. Only few HDAC inhibitors are approved and used as anti-cancer therapeutics. Thus, discovery of new and potential HDAC inhibitors are necessary in the effective treatment of cancer. Materials and Methods: This study proposed a method using support vector machine (SVM) to classify HDAC8 inhibitors and non-inhibitors in early-phase virtual compound filtering and screening. The 100 experimentally known HDAC8 inhibitors including 52 inhibitors and 48 non-inhibitors were used in this study. A set of molecular descriptors was calculated for all compounds in the dataset using ADRIANA. Code of Molecular Networks. Different kernel functions available from SVM Tools of free support vector machine software and training and test sets of varying size were used in model generation and validation. Results and Conclusion: The best model obtained using kernel functions has shown 75% of accuracy on test set prediction. The other models have also displayed good prediction over the test set compounds. The results of this study can be used as simple and effective filters in the drug discovery process.

고주파가열을 이용한 정어리 발포건조제품의 가공 II. 제품저장중의 품질변화와 저장기간 (Dehydration of foamed sardine-starch paste by microwave heating.)

  • 이병호
    • 기술사
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    • 제17권4호
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    • pp.8-14
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    • 1984
  • In this part of the studies on dielectric dehydration of foamed fish-starch paste, quality stability and shelflife of the product of which the preparation formula and processing conditions were described in the previous report (Lee et at., 1982) were determined by means of accelerated reaction test. The product was stored for 50 days under the conditions of temperatures at 35, 45, and 55$^{\circ}C$ in steady state and various water activities of 0.44, 0.52, 0.65, and 0.75, respectively. The loss of available lysine, the extent of TBA value, and the development of browning during the storage were measured and reaction kinetically analysed to assess quality stability and shelf-life of the product for the storage at room temperature of 25$^{\circ}C$. The extent of browning was accelerated with the increase of water activity and temperature marking the time to reach a limit of color and flavor deterioration, or to reach brown color density of 0.17 O.D./g at 420nm, 106 days at a$\_$w/=0.44, 35$^{\circ}C$, and 41 days at aw=0.65, 55$^{\circ}C$. These reaction rates resulted in a prediction of shelf-life, 130 to 110 days in the storage at au=0.44 to 0.75, 25$^{\circ}C$. The quality limit assessed by TBA values and sensory evaluation of rancidity was 87 days at a$\_$w/=0.44, 35$^{\circ}C$, and 30 days at aw=0.73, 55$^{\circ}C$ which gave a predicted shelf-life, 128 to 113 days at a$\_$w/=0.44 to 0.75, 25$^{\circ}C$ storage.

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Co-expression of Gamma-Aminobutyrate Aminotransferase and Succinic Semialdehyde Dehydrogenase Genes for the Enzymatic Analysis of Gamma-Aminobutyric Acid in Escherichia Coli

  • So, Jai-Hyun;Lim, Yu-Mi;Kim, Sang-Jun;Kim, Hyun-Ho;Rhee, In-Koo
    • Journal of Applied Biological Chemistry
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    • 제56권2호
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    • pp.89-93
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    • 2013
  • Gamma-aminobutyric acid (GABA) aminotransferase (gabT) and succinic semialdehyde dehydrogenase (gabD) genes from Pseudomonas fluorescens KCCM 12537 were cloned into a single pETDuet-1 vector and co-expressed in Escherichia coli BL21(DE3) simultaneously. The mixture of both enzymes, called GABase, is the key enzyme for the enzymatic analysis of GABA. The molecular mass of the GABA aminotransferase and succinic semialdehyde dehydrogenase were determined to be 52.8 and 46.7 kDa following computations performed with the pI/Mw program, respectively. The GABase activity between pH 6.0 and 9.0 for 24 h at $4^{\circ}C$ remained over 75%, but under pH 6.0 decreased rapidly. The GABase activity between 25 and $35^{\circ}C$ by the treatment at pH 8.6 for 30 min remained over 80%, but over $35^{\circ}C$ decreased rapidly. When the activity against GABA was defined as 100%, the purified GABase activity against 5-aminovaleric acid having a similar structure to GABA showed 47.7% and GABase activity against ${\beta}$-alanine, ${\varepsilon}$-amino-n-caproic acid, $_L$-ornithine, $_L$-lysine, and $_L$-aspartic acid showed between 0.3 to 2.3%. The GABA content was analyzed with this co-expressed GABase, compared with the other GABase which was available commercially. As a result, the content of GABA extracted from brown rice, dark brown rice, and black rice were $26.4{\pm}3.5$, $40.5{\pm}4.7$ and $94.7{\pm}9.3{\mu}g/g$, which were similar data of other GABase in the error ranges.

건어육의 지질산화에 의한 갈변에 관한 연구 1. 어육의 산화와 갈변 (Lipid Oxidative Browning in Dried Fish Meat 1. Oxidation of Fish Oil and Browning)

  • 이강호;서재수;이종호;류홍수;정인학;송승호
    • 한국수산과학회지
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    • 제20권1호
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    • pp.33-40
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    • 1987
  • This paper aims to study the browning reactions of lipid originated carbonyl compounds with nitrogenous compounds in dried fishes, flounder, mackerel, shrimp, hair tail fish, and whale. The major fatty acids in the flounder, the mackerel, the shrimp, and the hair tail fish were $C_{16:0},\;C_{18:1},\;C_{22:5},\;C_{22:6}$, and those in the whale meat were $C_{16:0},\;C_{18:1},\;C_{20:4}$. The nonpolar lipid contained higher percent of $C_{18:1}$ while the polar lipid contained higher percent of $C_{22:6}$. When those fishes were dried and stored, the PoV and CoV were high in the mackerel and the hair tail fish, whereas low in the flounder, the shrimp, and, the whale. The browning was developed more rapidly in the lipid soluble fraction than in the water soluble fraction of each sample, and the loss of available lysine and polyenoic acids were accompanied. The polyunsaturated fatty acids markedly decreased, particularly, in phospholipid than in neutral lipid, and $C_{20:5},\;C_{22:5},\;C_{22:6}$ were rapidly decreased during the storage.

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Evaluating Nutritional Quality of Single Stage- and Two Stage-fermented Soybean Meal

  • Chen, C.C.;Shih, Y.C.;Chiou, P.W.S.;Yu, B.
    • Asian-Australasian Journal of Animal Sciences
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    • 제23권5호
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    • pp.598-606
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    • 2010
  • This study investigated the nutritional quality of soybean meal (SBM) fermented by Aspergillus ($FSBM_A$) and/or followed by Lactobacillus fermentation ($FSBM_{A+L}$). Both fermented products significantly improved protein utilization of SBM with higher trichloroacetic acid (TCA) soluble true protein content, in vitro protein digestibility and available lysine content, especially in $FSBM_{A+L}$. Moreover, $FSBM_{A+L}$ produced a huge amount of lactic acid resulting in lower pH as compared to the unfermented SBM or soybean protein concentrate (SPC) (p<0.05). $FSBM_A$ and $FSBM_{A+L}$ raised 4.14% and 9.04% of essential amino acids and 5.38% and 9.37% of non-essential amino acids content, respectively. The ${\alpha}$-galactoside linkage oligosaccharides such as raffinose and stachyose content in $FSBM_A$ and $FSBM_{A+L}$ decreased significantly. The results of soluble protein fractions and distribution showed that the ratio of small protein fractions (<16 kDa) were 42.6% and 63.5% for $FSBM_A$ and $FSBM_{A+L}$, respectively, as compared to 7.2% for SBM, where the ratio of large size fractions (>55 kDa, mainly ${\beta}$-conglycinin) decreased to 9.4%, 5.4% and increased to 38.8%, respectively. There were no significant differences in ileal protein digestibility regardless of treatment groups. SPC inclusion in the diet showed a better protein digestibility than the SBM diet. In summary, soybean meal fermented by Aspergillus, especially through the consequent Lactobacillus fermentation, could increase the nutritional value as compared with unfermented SBM and is compatible with SPC.

말쥐치육(肉)의 건조특성(乾燥特性) (Drying Characteristics of Filefish Fillet)

  • 이병호
    • 한국식품영양과학회지
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    • 제11권1호
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    • pp.37-43
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    • 1982
  • 말쥐치육(肉)의 건조속도(乾燥速度)는 열풍온도(熱風溫度)가 높을수록 열풍온도(熱風速度)가빠를수록 크다. 여러 가지 조건중(條件中) $70^{\circ}C$(상대습도 6%) 3m/sec에서는 재료(材料)가 과속건조(過速乾燥)로 인(因)하여 표면경화현상(表面硬化現象)이 현저하게 일어남을 관찰할 수 있었다. 온도가 낮고 풍속(風速)이 느린 경우는 평형함수율(平衡含水率)에 도달(到達)하는 건조시간(乾燥時間)이 길어져서 비능률적(非能率的)임을 알았다. 따라서 온도가 $60^{\circ}C$(상대습도 8%)이고 풍속(風速)이 3m/sec때는 표면경화현상(表面硬化現象)이 적은 상태에서 건조(乾燥)가 진행(進行)되어 평형함수율(平衡含水率)에 이르는 시간(時間)은 $70^{\circ}C$, 1m/sec때보다 2시간이나 빠르고 다른 조건(條件)보다는 월등히 짧고 함수율 20%(wet basis)에 이르는 시간은 1.5시간 정도(程度) 느리나, $70^{\circ}C$보다 유효(有效)라이신의 변화나 표면경화(表面硬化) 등(等) 품질변화(品質變化)가 적으므로 적절(適切)한 조건(條件)이라 할 수 있겠다. 또 식(式)에 의(依)하여 산출(算出)된 확산계수(擴散係數)로 계산한 건조(乾燥)시간과 실험(實驗)에서 나타난 건조시간(乾燥時間)이 일치(一致)됨을 알았다.

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자숙 정어리육의 동결저장중의 품질변화 (Quality Change in Precooked Sardine during Frozen Storage)

  • 서재수;이강호;조진호
    • 한국수산과학회지
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    • 제16권2호
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    • pp.117-124
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    • 1983
  • Qualify changes of the precooked frozen sardine (Sardinops melanosticta) during frozen storage were investigated by measuring extractable protein, expressible drip, available lysine and lipid oxidation as peroxide value. Fresh sardine was dressed, washed in chilled water, cooked in boiling water to have $55^{\circ}C\;and\;70^{\circ}$ at the center of the body, frozen at $-40^{\circ}C$, and finally stored at $-20^{\circ}C$ for 84 days. The quality factor mentioned above were determined in both ordinary and dark muscle at 14 day intervals through the period of storage. When cooked at $70^{\circ}C$, the changes in expressible drip were less than that of raw and the one cooked at $55^{\circ}C$. In observation of the extractability of muscle protein, no great change in extractable sarcoplasmic protein was observed, the extractable myofibrillar protein, however, showed a tendency to decrease during the period of frozen storage, accompanying the increase of the alkali-soluble protein. That was more excessive in ordinary muscle than dark muscle. Lipid oxidation of dark muscle was faster than that of ordinary muscle. Acid value was not changed, and peroxide value of the samples cooked at $70^{\circ}C\;and\;55^{\circ}$ was higher than that of raw at the early stage of the storage, after 40-50 day storage, it became lower than that of raw muscle.

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Precision feeding and precision nutrition: a paradigm shift in broiler feed formulation?

  • Moss, Amy F.;Chrystal, Peter V.;Cadogan, David J.;Wilkinson, Stuart J.;Crowley, Tamsyn M.;Choct, Mingan
    • Animal Bioscience
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    • 제34권3_spc호
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    • pp.354-362
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    • 2021
  • Broiler chickens grow rapidly, and their nutrient requirements change daily. However, broilers are fed three to five diet phases, meaning nutrients are under or oversupplied throughout production. Increasing diet phases improves production efficiency as there is less time in the production cycle that nutrients are in under or over-supply. Nevertheless, the process of administering four or more diets is costly and often impractical. New technologies are now available to blend feed to match the daily nutrient requirements of broilers. Thus, the aim of this review is to evaluate previous studies measuring the impact of increasing feed phases on nutrient utilisation and growth performance, and review recent studies taking this concept to the extreme; precision nutrition - feeding a new diet for each day of the production cycle. This review will also discuss how modern precision feeding technologies have been utilised and the potential that new technologies may bring to the poultry industry. The development of a precision nutrition regime which targets daily requirements by blending dietary components on farm is anticipated to improve the efficiency of production, reduce production cost and therefore improve sustainability of the industry. There is also potential for precision feeding technology along with precision nutrition strategies to deliver a plethora of other management and economic benefits. These include increased fluidity to cope with sudden environmental or market changes, and the ability to alter diets on a farm by farm level in a large, integrated operation. Thus, the future possibilities and practical implications for such technologies to generate a paradigm shift in feed formulation within the poultry industry to meet the rising demand for animal protein is also discussed.

Effect of Microbial Phytase on Performance, Nutrient Absorption and Excretion in Weaned Pigs and Apparent Ileal Nutrient Digestibility in Growing Pigs

  • Zeng, Z.K.;Piao, X.S.;Wang, D.;Li, P.F.;Xue, L.F.;Salmon, Lorraine;Zhang, H.Y.;Han, X.;Liu, L.
    • Asian-Australasian Journal of Animal Sciences
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    • 제24권8호
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    • pp.1164-1172
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    • 2011
  • Two experiments were conducted to evaluate the efficacy of Trichoderma reesei derived phytase for pigs fed diets with fixed calcium to total phosphorus ratios (1.5:1). In Exp. 1, 280 weaned pigs (initial BW of $10.32{\pm}1.94$ kg) were allocated to one of five dietary treatments on the basis of weight and gender in a randomized complete block design. Treatments were the low phosphorus (0.6% Ca, 0.4% total P and 0.23% available P) diets supplemented with 0, 250, 1,000, or 2,000 FTU phytase/kg of diet and a positive control diet (PC; 0.85% Ca, 0.58% total P and 0.37% available P). The treatments were applied to seven pens with eight pigs per pen, half male and half female. In Exp. 2, six barrows fitted with ileal T-cannula (initial BW = $35.1{\pm}1.6$ kg) were assigned to three dietary treatments with a double $3{\times}3$ Latin square design. The dietary treatments were the low-phosphorus diet (0.53% Ca, 0.34% total P and 0.14% available P), the low phosphorus diet plus 1,000 FTU phytase/kg and a positive control diet (0.77% Ca, 0.50% total P and 0.30% available P). In Exp. 1, there were linear increases (p<0.01) in weight gain, phosphorus absorption, bone strength, calcium and phosphorus content of fat-free dried bone and plasma phosphorus concentrations with increasing dose rate of phytase. The performance of pigs fed the diets with 250, 1,000, or 2,000 FTU of phytase/kg did not differ from pigs fed the PC diet. Pigs fed diets with 1,000 or 2,000 FTU of phytase/kg did not differ from pigs fed the PC diet in bone characteristics. The apparent digestibility of dry matter, crude protein, ash and energy was not affected by dietary treatment. However, pigs fed the PC diet excreted more fecal phosphorus (g/d, p<0.01) and fecal phosphorus per BW gain (g/kg) than pigs fed the diets with phytase. Phytase linearly decreased (p<0.01) fecal phosphorus excreted per BW gain (g/kg), plasma calcium concentration as well as plasma and bone alkaline phosphatase activity. In Exp. 2, phytase supplementation in the low-P diet increased (p<0.05) the apparent ileal digestibility (AID) of Ca, P, leucine, lysine, phenylalanine, alanine and cysteine, tended to AID of crude protein, isoleucine, threonine, asparagine and serine. In conclusion, the novel phytase originated from Trichoderma reesei is effective in releasing Ca, P, and amino acids from corn soy based diet for pigs.

우유의 가열처리에 따른 지표물질의 변화 (Changes of Indicative Substances According to Heat Treatment of Milk)

  • 김경미;홍윤호;이용규
    • 한국식품영양과학회지
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    • 제21권4호
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    • pp.390-397
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    • 1992
  • 본 실험에서는 우유의 열처리 방법을 저온살균 (LTLT), 고온살균(HTST), 초고온(UHT)살균, 초고온 (UHT)멸균 등으로 나누어 열처리 정도를 파악할 수 있는 지표들-HMF, 유효성 Iysine, 유청단백질, sulfhy-dryl과 disulfide groups, ascorbic acid함량을 중심으로 열처리에 따른 이화학적 특성을 분석, 비교하였다. HMF함량은 저온 살균유에서 0.66~1.62$\mu$M/1, 고온 살균유에서 0.90~1.78$\mu$M/1, 초고온 살균유에서는 7.43~8.97$\mu$M/1, 초고온 멸균유에서는 3.53$\mu$M/1로 측정되었다. 유효성 Iysine함량은 원유에서 293.2mg/100m1 이었으며 저온 살균유에서 0.7~1.4%, 고온 살균유에서 0.3~1.7%, 초고온 살균유에서 7.1~10.8% 그리고 초고온 멸균유에서 5.2%가 각각 감소하였다. 유청 단백질의 변성율은 저온 살균유에서 9.5~11.4%, 고온 살균유에서 9.5~17.1%, 초고온 살균유는 89.3~95.0%, 그리고 초고온 멸균유에서 62.7%를 각각 나타내었다 Sulfhydryl과 disulfide groups은 sulfhydryl기가 원유에서 2.86$\mu$M/g protein이었으며 저온 살균유에서 3.1~10.1%, 고온살균유에서 7.6~11.2%, 초고온 살균유에서 14.0~19.6%, 초고온 멸균유에서 17.5%가 증가되었으며 disulfide groups은 원유가 28.93$\mu$M/g protein으로 저온 살균유에서 11.1~8.4%, 고온 살균유에서 7.0~7.4%, 초고온 살균유에서 18.2~20.4% 그리고 초고온멸균유에서 14.7%가 각각 감소하였다. Ascorbic acid 함량은 원유에서 6.05mg/1이었으며 저온 살균유에서 73~76%, 고온 살균유에서 36.4~58.7%, 초고온 살균유에서 39~53% 그리고 초고온 멸균유에서 26%의 감소율을 각각 나타냈다. 이와 같이 열처리에 따른 변화를 보면 열처리 온도가 높아짐에 따라 HMF 함량과 유청단백질의 변성율은 증가되고 Iysine함량은 감소되었으며 sulfhydryl기가 증가됨에 따라서 disulfide groups은 감소되는 경향을 보였고 ascorbic acid는 열처리 온도뿐만 아니라 시간과도 관련이 있음을 알 수 있었다. 저온 살균유와 초고온 살균유 사이에서는 지표물질들의 함량이 다소 차이가 있음을 볼 수 있었다.

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