• 제목/요약/키워드: antigenic site

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위치지정 변이기법을 이용한 Bacillus thuringiensis var. kurstaki NRD 6-Stu 1의 육성 (Development of Bacillus thuringensis var. kurstaki NRD 6-Stu 1 by Site-Directed Mutagenesis)

  • 이종수
    • 자연과학논문집
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    • 제6권1호
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    • pp.41-48
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    • 1993
  • 위치지정 변이기법을 이용하여 Bacillus thuringiensis var. kurstaki NRD 6의 내독소 유전자의 N말단 독성부위를 변이시켜 Bacillus thuringiensis var. kurstaki NRD 6-Stu 1을 육종하였다. 내독소에 대한 염기서열 조사결과, 변이주의 내독소 유전자부위에 Stu 1 인식부위가 생성되었고 특히, 이부위의 177번 염기 A가 C로 치환된 silent mutation이 일어났음을 확인하였다. 변이주의 내독소 유전자의 항원성질은 친주와 차이가 없었고 Choristoneura femiferana-1에 대한 독성도는 0.015~0.030ng으로 친주의 0.01~0.024ng과 유사하였으나 다른 친주계열인 B.t.kurstaki NRD 5의 500~1000ng과 B.t.kurstaki NRD 4(무독성)보다 강하였다.

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Analysis for nucleotide sequence of the small membrane (sM) protein gene of porcine epidemic diarrhea virus Chinju99 isolated in Korea

  • Yeo, Sang-Geon;Lee, Changhee
    • 대한수의학회지
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    • 제47권2호
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    • pp.169-174
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    • 2007
  • To provide information for the molecular pathogenesis and antigenic structures of Korean isolates of porcine epidemic diarrhea virus (PEDV), the small membrane (sM) protein gene of Chinju99 strain, which was previously isolated from piglets suffering from severe diarrhea was characterized and further analyzed with other PEDV strains. The sM gene of Chinju99 generated by reverse transcription and polymerase chain reaction had a single open reading frame with 231 bases consisting of 24.2% adenine, 18.6% cytosine, 18.1% guanine and 39.0% thymine nucleotides. Nucleotide sequence of the gene revealed 97.8% homology to those of Belgian strain CV777 and British strain Br1/87, and 97.0% to Chinese strain LZC. The gene encoded a protein with 76 amino acids, and putative amino acid sequence of the gene revealed 98.7% homology to those of CV777 and Br1/87, and 96.1% to LZC. The amino acids of Chinju99 sM gene consisted of mostly hydrophobic residues, and there were one potential N-myristylation site and one potential threonine (T)-linked phosphorylation site recognized. Also, there was a transmembrane region with 46 amino acids, and Chinju99 was more close to CV777 and Br1/87 than to LZC in phylogenetic analysis on the sM amino acid sequences.

Characterization and Epitope Mapping of KI-41, a Murine Monoclonal Antibody Specific for the gp41 Envelope Protein of the Human Immunodeficiency Virus-1

  • Shin, Song-Yub;Park, Jung-Hyun;Jang, So-Youn;Lee, Myung-Kyu;Hahm, Kyung-Soo
    • BMB Reports
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    • 제31권1호
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    • pp.58-63
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    • 1998
  • In this study, a mouse monoclonal antibody (mAb) against gp41(584-618), the immunodominant epitope protein, was generated. For this purpose, BALB/c mice were immunized with double branched multiple antigenic peptides derived from the HIV-1 gp41(584-618) sequence, and antibody-secreting hybridoma were produced by fusion of mice splenocytes with SP2/0 myeloma cells. One clone producing an antigen specific mAb, termed KI-41(isotype IgG1) was identified, whose specific reactivity against gp41(584-618) could be confirmed by ELISA and Western blot analysis. Epitope mapping revealed the recognition site of the mAb KI-41 to be located around the sequence RILAVERYLKDQQLLG, which comprises the N-terminal region within the immunized gp41(584-618) peptied. Since this mAb recognizes this specific epitope within the HIV-1 gp41 without any cross-reactivity to other immunodominant regions in the HIV-2 gp35, KI-41 will provide some alternative possibilities in further applications such as the development of indirect or competitive ELISA for specific antibody detection in HIV-1 infection or for other basic researches regarding the role and function of HIV-1 gp41.

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Specific Targeting of Fluorescein Isothiocyanate with Ep-CAM Antibody(Specific targeting of FITC with Ep-CAM Antibody)

  • Lee, Young-Tae;Tae, Gun-Sik
    • Journal of Photoscience
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    • 제10권3호
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    • pp.237-240
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    • 2003
  • The tetradecameric peptide (K47-K60) near the NH$_2$-terminal region of epithelial-cell adhesion molecule (Ep-CAM) was chosen as antigenic site and a polyclonal antibody was generated, which could recognize Ep-CAM from the mouse colon tissue or the colon cancer cell, CT-26, in Western blot analysis. Then, the fluorescein isothiocyanate (FITC), a fluorescence dye, was conjugated with the affinity purified Ep-CAM antibody using thiocyanate and the amino groups of FITC and antibody, respectively. The molar ratio of FITC to antibody was estimated approximately 1.86 to 1.00 by measuring the optical densities at 492 nm and 280 nm. Ep-CAM antibody-FITC conjugate was then used for immunohistochemistry of the CT-26 cells. Judging from the shapes formed by fluorescence, the Ep-CAM antibody could delivered FITC to the surface of cells in which Ep-CAM was expressed. This result implies that Ep-CAM antibody could be also used for the tissue-specific delivery of the photosensitizer to the target protein via antigen-antibody interaction.

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융합단백질로 발현된 톡소포자충의 주요막단백질(p30) 절편의 항원성 (Analysis of antigenic domain of GST fused major surface protein (p30) fragments of Toxoplasma gondii)

  • 남호우;임경심
    • Parasites, Hosts and Diseases
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    • 제34권2호
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    • pp.135-142
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    • 1996
  • 톡소포자충(Toxoplosma gondii) 주요막단백질의 하나인 30 kDa 단백질(p30)의 항원부위를 결정하고자 p30의 아미노산 분석에 따른 친수성 부위 및 혐수성 부위에 맞게 유전자를 증폭하고 발현시켜 항원성을 검토하였다 p30의 절편으로는 p30 전체 p30의 N-말단 Signal Sequence와 C- 탈단의 혐수성 부위를 제거한 S28. S28의 N-말단 2/3부위인 Al9. S28의 C-말단 2/3부위인 Pl9. 528의 N-탈난 1/3부위인 X9 중앙 1/3부위인 Y10 및 C-말단 1/5부위인 Z9로 구성하였다. 각절편에 대한 primer에는 EcoR I의 clampsequence를 포함시켜 중합효소반응으로 증폭시켰으며 G57를 발현하는 pGEX-4T-1 vector에 삽입시킨 후 Eschericha coli(.JM105 strain)에 형질변형시키고 IgG로 각 절편이 GST와 융합단백질로 발현되도록 하였다 SDS-PAGE상에서 p30은 63 kDa. S28는 54 kDa Al9과 Pl9은 각각 45 kDa. X9은 35 kDa. Y10은 36 kDa 및 29은 35 kDa 단백질로 발현되었다. 각각의 단백질은 westemblot상에서 GSTdetectionkit와 잘 반응하여 융합단백질임을 확인하였다. 톡소포자충증 환자 혈청과 westem blot에서 p30. S28 및 Al9은 반응하여 항원성이 인정되었으나 Pl9 . X9, Y10 및 Z9는 반응하지 않았다 따라서. p30의 중간 1/3 부위의 존재하에 N-말단 1/3부위가 항원성을 나타내는 구조적 항원이거나. 첫 1/3부위와 중 간 1/3부위의 경계에 위치한 polypeptide가 항원성을 발현하는 것으로 추정되었다.

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유전공학적 방법에 의한 토끼 글로빈 유전자의 재조합과 대장균에서의 발현 (Molecular Cloning and Expression in Escherichia coli of a Rabbit Globin Gene)

  • Jang, Sung-Key;Park, Hyune-Mo
    • 한국동물학회지
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    • 제27권2호
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    • pp.103-116
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    • 1984
  • 유전자 구조 및 유전정보 흐름의 차이로 인하여 고등생물의 유전자를 미생물에 직접 cloning하면 원하는 유전자 산물을 얻지 못하는 경우가 많다. 이것을 극복하기 위해서는 화학적인 방법으로 유전자를 합성하든지, 또는 역제효소를 사용하여 고등생물의 mRNA로부터 유전자를 합성하여 cloning하는 방법을 사용한다. 본 연구에서는 oligo(dT)-cellulose column 방법으로 순수분리한 plasmid pBR322의 Pst I site에 cloning하였다. 우선 AMV reverse transcriptase로 primary cDNA를 합성하고, 알칼리를 처리하여 주형 RNA를 제거했다. 이번에는 이 primary cDNA를 주형으로 Klenow enzyme과 reverse transcriptase를 차례로 처리하여 double stranded DNA를 합성하고, 이 때 5' end 근처에 형성되는 hairpin loop을 Sl nuclease로 제거했다. Terminal deoxynucleotidyl transferase를 사용하여, 합성된 dsDNA에는 poly(dC) track을, Pst I endonuclease를 처리한 plasmid DNA에서는 poly(dG) track을 각각 붙인다음 이들을 서로 annealing시키고 E. coli에 transformation시켜서 크기가 큰 plasmid를 갖는 clone을 cracking 방법으로 일처 선별하였다. 이렇게 선별된 clone을 in 냐셔 hybridization 방법으로 조사하여 globin DNA가 들어간 colony를 이차 선별하고 여러 restriction enzyme으로 잘라보아 globin DNA가 cloning된 것을 확인하였다. 토끼 hemoglobin으로 immunize한 rat (Wistar)에서 뽑은 제일차 혈청과 염소에서 뽑은 제이차 혈청의 antibody를 사용한 radioimmunoassay방법으로, cloning된 globin gene이 대장균내에서 발현되는 지의 여부를 살펴 보았는데, 박테리아의 $\\beta$-lactamase와 토끼의 globin이 결합된 chimeric protein이 대장균 내에서 다량 합성되며, 이 단백질은 토끼 hemoglobin의 antigenic determinant를 가지고 있음을 알 수 있었다.

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계난백(鷄卵白) Lysozyme의 N-말단(末端)과 C-말단(末端) 항원결정기(抗原決定基)에 대한 연구(硏究) (Further Studies on the Specificity of the N- and C-terminal Antigenic Determinant of Hen Egg-white Lysozyme)

  • 하윤문
    • 대한미생물학회지
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    • 제12권1호
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    • pp.19-32
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    • 1977
  • 계난백(鷄卵白) Lysozyme N-와 C 말단(末端) 항원결정기(抗原決定基)($P_{17}$: sequence $Lys^1-{cys-}^6-Asn^{27},\;{Trp^{12}}_2-Cys^{127}-Leu^{129}$)의 특이성(特異性)에 대(對)하여 연구(硏究)했다. $^{14}C-acetyl$ Lysozyme 과 정제(精製)한 guinea pig 항(抗)-$P_{17}$ 항체(抗體)와의 결합(結合)을 Scatchard plot 상(上)에서 나타낸 결과(結果) 그 실험치(實驗値)가 거의 r=1였다. 이것은 Lysozyme에 대(對)하여 각각(各各) 다른 친화성(親和性)을 가진 2개(個)의 항체군(抗體群)의 존재(存在)나 그렇잖으면 제(第)1의 항체결합부위(抗體結合部位)에 최초(最初)의 Lysozyme 분자(分子)가 결합(結合)함으로 인(因)하여 항체분자(抗體分子)의 제(第)2의 결합부위(結合部位)에 다른 Lysozyme 분자(分子)의 결합(結合)을 방해하는 즉 steric hindrance에 의한 가능성(可能性)을 시사(示唆)한다. 여러가지 peptides의 항원활성(抗原活性)을 $^{14}C-acetyl-P_{17}$과 항(抗)-$P_{17}$ 항체(抗體)와의 결합저해(結合沮害)시험에서 측정(測定)했다. 그 결과(結果) 단지 $P_{17}$$P_{17}t$(sequence $Lys^1-cys^5-Homoser^{12},\;Trp^{123}-cys^{127}-Leu^{128})$)만이 억제되었고 그 $K_1$치(値)가 각각(各各) $2.0{\times}10^4$$8.1{\times}10^3$이였다. 이들 결과(結果)를 종합(綜合)하면 $P_{17}$의 항(抗)-$P_{17}$ 항체(抗體)와의 직접적 결합부위(結合部位)는 $P_{17}$의 말단부위(末端部位)에 국재(局在)해 있는 것을 암시해 준다. 한편 $P_{17}$의 나머지 부분(部分)은 이 항원결정기(抗原決定基) 구조(構造)를 유지(維持)하는데 중요(重要)한 역할(役割)을 할 것으로 생각되며 또한 이 결정기내(決定基內)의 한 개의 disulphide 결합(結合)은 면역학적(免疫學的) 활성(活性)을 나타내는데 필수적(必須的)인 것으로 믿어진다.

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Calcified Macroplastique Substance: A Rare Cause of Recurrent Gross Hematuria after Endoscopic Injection

  • Seo, Min Hae;Song, Ji Yeon;Chung, Jae Min;Lee, Sang don;Kim, Su Young;Kim, Seong Heon
    • Childhood Kidney Diseases
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    • 제22권2호
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    • pp.71-74
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    • 2018
  • Endoscopic subureteral injection for treatment of vesicoureteral reflux (VUR) is known to be safe and efficient due to its minimal invasive nature. Being non-migratory, non-antigenic, and biocompatible, Macroplastique (Polydimethylsiloxane) is likely to be stable over time. A 5-year-old boy with a past history of subureteral administration of Macroplastique for unilateral Grade V VUR 4 years ago presented with recurrent gross and microscopic hematuria, along with suprapubic pain. On computed tomography (CT) abdomen, calcified material, suspected to be a stone, was visualized in the bladder. On diagnostic cystoscopy, calcification was seen around the orifice site where Macroplastique injection had been performed. We removed the calcific material by Holmium laser. Endoscopic subureteric implantation has several advantages, but nevertheless, vigilance is needed to detect long-term complications, especially in patients with gross or microscopic hematuria.

일본 새매 (Accipiter virugatus gularis)로부터 분리된 Paramyxovirus에 대한 단 Clone성 항체 (Monoclonal Antibodies Against a Paramyxovirus Isolated from Japanese Sparrow-Hawks(Accipiter virugatus gularis))

  • Hoshi;Mikami, S.T.;Onuma, M.;Izawa, H.
    • 한국가금학회지
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    • 제10권1호
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    • pp.60-66
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    • 1983
  • Monoclonal antibodies against Taka virus, a variant of Newcastle disease virus (NDV), were produced to compare the antigenicites of several avian paramyxoviruses including NDV. It was also used to study the activesite(s) of haemagglutin (HA) and neuraminidase activities of NDV. Five independent hybrid cell lines, which produced monoclonal antibodies against haemagglutinin-neuraminidase (HN) molecule of Taka virus, were established. From the results of the cross haemagglutination-inhibition(HI) test the monoclonal antibodies, the HN molecule of Taka virus seemed to have at least three different antigenic determinats; one was specific for all NDV strain tested, the second was only for Taka virus and the third was for Take virus, Banger and Yucaipa Furthermore the differences in the ratio of HI to neuraminidase-inhibition titers suggested that the active sites involved in HA and neuraminidase activities might be different from each other. However, since each of five monoclonal anitbodies was not especially specific for either HA or neuraminidase, the possibility that a single active site on the HN molecule may be responsible for both activities has not been excluded.

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Rapid Dot-Blot Immunoassay for Detecting Multiple Salmonella enterica Serotypes

  • Jeongik Cho;Heymin Song;Hyun C. Yoon;Hyunjin Yoon
    • Journal of Microbiology and Biotechnology
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    • 제34권2호
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    • pp.340-348
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    • 2024
  • Salmonella, a major contributor to foodborne infections, typically causes self-limiting gastroenteritis. However, it is frequently invasive and disseminates across the intestinal epithelium, leading to deadly bacteremia. Although the genus is subdivided into >2,600 serotypes based on their antigenic determinants, only few serotypes are responsible for most human infections. In this study, a rapid dot-blot immunoassay was developed to diagnose multiple Salmonella enterica serotypes with high incidence rates in humans. The feasibility of 10 commercial antibodies (four polyclonal and six monoclonal antibodies) was tested using the 18 serotypes associated with 67.5% Salmonella infection cases in the United States of America (U.S.A) in 2016. Ab 3 (polyclonal; eight of 18 serotypes), Ab 8 (monoclonal; 13 of 18 serotypes), and Ab 9 (monoclonal; 10 of 18 serotypes) antibodies exhibited high detection rates in western blotting and combinations of two antibodies (Ab 3+8, Ab 3+9, and Ab 8+9) were applied to dot-blot assays. The combination of Ab 3+8 identified 15 of the tested 18 serotypes in 3 h, i.e., S. Enteritidis, S. Typhimurium, S. Javiana, S. I 4,[5],12:i:-, S. Infantis, S. Montevideo, S. Braenderup, S. Thompson, S. Saintpaul, S. Heidelberg, S. Oranienburg, S. Bareilly, S. Berta, S. Agona, and S. Anatum, which were responsible for 53.7% Salmonella infections in the U.S. in 2016. This cost-effective and rapid method can be utilized as an on-site colorimetric method for Salmonella detection.