• Molecules and Cells
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• v.23 no.3
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• pp.287-303
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• 2007

Expressed sequence tags (ESTs) and differentially expressed cDNAs from the self-fertilizing fish, Kryptolebias marmoratus were mined to develop alternative biomarkers for endocrine-disrupting chemicals (EDCs). 1,577 K. marmoratus cDNA clones were randomly sequenced from the 5'-end. These clones corresponded to 1,518 and 1,519 genes in medaka dbEST and zebrafish dbEST, respectively. Of the matched genes, 197 and 115 genes obtained Unigene IDs in medaka dbEST and zebrafish dbEST, respectively. Many of the annotated genes are potential biomarkers for environmental stresses. In a differential display reverse transcriptase-polymerase chain reaction (DD RT-PCR) study, 56 differential expressed genes were obtained from fish liver exposed to bisphenol A. Of these, 16 genes were identified after BLAST search to GenBank, and the annotated genes were mainly involved in catalytic activity and binding. The expression patterns of these 16 genes were validated by real-time RT-PCR of liver tissue from fish exposed to bisphenol A. Our findings suggest that expression of these 16 genes is modulated by endocrine disrupting chemicals, and therefore that they are potential biomarkers for environmental stress including EDCs exposure.

• Korean Journal of Environmental Biology
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• v.22
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• pp.71-77
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• 2004

Alkylphenols (8), chlorophenols (2), bisphenol A, eoprostanols (2) and cholesterol compounds were analyzed in the surface water and surface sediment taken from Gwangyang Bay and surrounding streams in 2001. Among the target analytes, nonylphenol and dihydrocholesteyol compounds were detected with high concentration and high frequency. t-Octylphenol, bisphenol A and coprostanols were detected only in some sediment samples from the stream. The highest concentration of nonylphenol was determined in stream sample, and concentrations of nonylphenol in the inner part of Gwangyang Bay were higher than those in the out part. Nonylphenol concentrations in the surface seawater and surface sediment samples ranged from 4.0 to 74.0 ng l$\^$-1/ and from 3.1 to 74.3 ng g$\^$-1/ dry wt., respectively. Partition coefficient (LogK$\_$oc/) of nonylphenol between sediment and water was 4.8. Nonylphenol nnd dihydrocholesteol concentrations in the stream surface sediment samples ranged from 4.6 to 808.6 and from 78.4 to 1133.6 ng g$\^$-1/ dry wt., respectively. Relatively high concentrations of nonylphenol were found in the stream samples which aye flowing through industrial complex area, while dihydrocholesterol concentration was relatively high in the stream samples which are flowing through only municipal area. Seaward decreasing tyend in nonylphenol concentration was observed from the Seomjin River estuary to the Gwanyang Bay. Such trend was best supported by the strong correlation between nonylphenol concentration and salinity in water samples.

• Korean Journal of Microbiology
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• v.50 no.3
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• pp.210-215
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• 2014

Pseudomonas nitroreducens TX1 was isolated from a rice field drainage in Taiwan. The bacterium is of special interest because of its capability to use a group of nonionic surfactants such as alkylphenol polyethoxylates even at high concentrations as a sole carbon source. In this study, a small cryptic circular plasmid, pTX1, was characterized from P. nitroreducens TX1. It is 2,286 bp in length with a GC content of 63.3% and harbors three open reading frames, $Rep_{pTX1}$ and functionally unidentified ORF1 and ORF2. The predicted $rep_{pTX1}$ gene product is homologous to Rep proteins of plasmids belonging to the pC194/pUB110 family, which is predominantly found in Gram-positive bacteria and is known to replicate by the rolling-circle mechanism. The copy number of pTX1 was estimated to be about 150 in each cell. Based on the genetic fingerprints and comparison with other plasmids, it is concluded that pTX1 replicates by a rolling circle mechanism which is rarely found for Pseudomonas plasmids.

• The Korean Journal of Pesticide Science
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• v.15 no.1
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• pp.22-27
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• 2011

Nonylphenols are toxic compounds classified as endocrine disruptors. We investigated the nonylphenols clean-up procedures for the contamination control in the quantitative analysis. In this research we analyzed the residual nonylphenols in the solvent and the SPE cartridges. First, at the analysis of HPLC grade solvents (n-hexane, diethyl ether, ethyl acetate and its mixture), diethyl ether was confirmed the residue as 0.963 ${\mu}g/mL$, and we eliminated the contaminant through the distillation with $CaH_2$, Second, at the analysis of SPE cartridges (silica gel and Florisil), all products were showed the residue at 0.046~13.0 ${\mu}g/mL$, but unfortunately the residue in the cartridge were not easily removed with referenced methods in all tested SPE cartridges except in silica gel SPE cartridge with glass ware.