• Title/Summary/Keyword: algorithmic cascading

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Parallelization and Performance Optimization of the Boyer-Moore Algorithm on GPU (Boyer-Moore 알고리즘을 위한 GPU상에서의 병렬 최적화)

  • Jeong, Yosang;Tran, Nhat-Phuong;Lee, Myungho;Nam, Dukyun;Kim, Jik-Soo;Hwang, Soonwook
    • KIISE Transactions on Computing Practices
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    • v.21 no.2
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    • pp.138-143
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    • 2015
  • The Boyer-Moore algorithm is a single pattern string matching algorithm that is widely used in various applications such as computer and internet security, and bioinformatics. This algorithm is computationally demanding and requires high-performance parallel processing. In this paper, we propose a parallelization and performance optimization methodology for the BM algorithm on a GPU. Our methodology adopts an algorithmic cascading technique. This results in significant reductions in the mapping overheads for the threads participating in the parallel string matching. It also results in the efficient utilization of the multithreading capability of the GPU which improves the load balancing among threads. Our experimental results show that this approach achieves a 45-times speedup at maximum, in comparison with a serial execution.