• Title/Summary/Keyword: Yellow head virus (YHV) genotype 8

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Phylogenetic Characteristics of Yellow Head Virus (YHV) Genotype 8 Isolated from Fenneropenaeus chinensis in Korea (자연산 대하(Fenneropenaeus chinensis)에서 검출된 노랑머리 바이러스 Genotype 8의 계통분류학적 특성)

  • Jang, Gwang Il;Kim, Bo Sung;Oh, Yun Kyeong;Hwang, Jee Youn;Kwon, Mun Gyeong;Kim, Sumi
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.54 no.5
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    • pp.698-702
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    • 2021
  • Yellow head virus (YHV) is a rod-shaped positive-sense single-stranded RNA virus, classified into the genus Okavirus, family Roniviridae, and order Nidovirales. In this study, 200 fleshy prawns (Fenneropenaeus chinensis) collected from the vicinity of Narodo in Goheung-gun, Korea, were screened for the presence of yellow head complex viruses and related genotype such as YHV genotype 8. The detection rate of YHV genotype 8 among the 200 fleshy prawns, determined using nested RT-PCR (reverse transcription polymerase chain reation), was 39.0%. Phylogenetic analysis of the ORF1b gene of YHV showed that eight distinct genetic lineages were detected. The four strains of YHV genotype 8 obtained in this study formed a robust clade with the YHV genotype 8 group that was first isolated from fleshy prawns in China suspected to have acute hepatopancreatic necrosis disease (AHPND).

Detection and genetic characteristic of Yellow-head virus genotype 8 (YHV-8) Cultured Litopanaeus vanamei, in Korea (국내 양식 흰다리새우에서 검출된 노랑머리바이러스(YHV-8)의 유전학적 특성)

  • Kim, Seok-Ryel;CWR, Gunasekara;SHMP, Wimalasena;Shin, Gee-Wook
    • Journal of fish pathology
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    • v.33 no.1
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    • pp.77-81
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    • 2020
  • This study was performed for screening yellow head virus(YHV) complex in 252 including 235 white leg shrimps (Litopenaeus vannamei) and 17 oriental shrimp (Fenneropenaeus chinensis) collected from 18 farms located in southwestern province of Korea. The virus complex was detected by nested reverse-transcriptase polymerase chain reaction (RT-PCR) assay. In the assay, amplicons were resulted in RNAs exracted from 38 shrimps (21 white leg shrimps and 17 oriental shrimps) obtained from 7 farms. In phylogenetic analysis using sequences of ORF1b gene, all 38 sequences obtained in this study formed an independent lineage with YHV-8 genotype firstly isolated in China, belonged to an YHV-8 clade.