• Journal of Internet Computing and Services
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• v.15 no.1
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• pp.29-43
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• 2014

The development of NGS technologies, such as scientific workflows, has reduced the time required for decoding DNA sequences. Although the automated technologies change the genome sequence analysis environment, limited computing resources still pose problems for the analysis. Most scientific workflow systems are pre-built platforms and are highly complex because a lot of the functions are implemented into one system platform. It is also difficult to apply components of pre-built systems to a new system in the cloud environment. Cloud computing technologies can be applied to the systems to reduce analysis time and enable simultaneous analysis of massive DNA sequence data. Web service techniques are also introduced for improving the interoperability between DNA sequence analysis systems. The workflow-based middleware, which supports Web services, DBMS, and cloud computing, is proposed in this paper for expecting to reduceanalysis time and aiding lightweight virtual instances. It uses DBMS for managing the pipeline status and supporting the creation of lightweight virtual instances in the cloud environment. Also, the RESTful Web services with simple URI and XML contents are applied for improving the interoperability. The performance test of the system needs to be conducted by comparing results other developed DNA analysis services at the stabilization stage.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.36 no.12B
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• pp.1509-1521
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• 2011

WfMC, which is one of the international standardization organizations leading the business process and workflow technologies, has been officially released the BPAF1.0 that is a standard format to record process instances' event logs according as the business process intelligence mining technologies have recently issued in the business process and workflow literature. The business process mining technologies consist of two groups of algorithms and their analysis techniques; one is to rediscover flow-oriented process-intelligence, such as control-flow, data-flow, role-flow, and actor-flow intelligence, from process instances' event logs, and the other has something to do with rediscovering relation-oriented process-intelligence like process-driven social networks and process-driven affiliation networks from the event logs. The current standardized format of BPAF1.0 aims at only supporting the control-flow oriented process-intelligence mining techniques, and so it is unable to properly support the relation-oriented process-intelligence mining techniques. Therefore, this paper tries to extend the BPAF1.0 so as to reasonably support the relation-oriented process-intelligence mining techniques, and the extended BPAF is termed BPAF2.0. Particularly, we have a plan to standardize the extended BPAF2.0 as not only the national standard specifications through the e-Business project group of TTA, but also the international standard specifications of WfMC.

• Journal of the Computational Structural Engineering Institute of Korea
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• v.21 no.6
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• pp.535-541
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• 2008

As the concurrent engineering concept has emerged along with the support of optimization techniques, lots of endeavors have been made to apply optimization techniques to actual design problems for a holistic decision. Even if the range of design problems which the optimization is applicable to has been extended, most of ship designs still remain in an iterative approach due to the difficulties of seamless integration of all related design activities. In this approach, an entire design problem is divided into many sub-problems and carried out by many different disciplines through complicated internal interactions. This paper focuses on preliminary ship design process. This paper proposes a process centric integrated framework as the first step to establish a workflow based design process management system. The framework consists of two parts; a schedule management part to support a manager to monitor current progress status and adjust current schedule, and a process management part to assist a design to effectively perform a series of design activities by following a predefined procedure. Overall system are decomposed into modules according to the target to be managed in each module. Appropriate interactions between the decomposed modules are designed to achieve a consistency of the entire system. Design process model is also designed on a thorough analysis of actual ship design practice. The proposed framework will be embodied using a commercial workflow package.

• Proceedings of the Korean Operations and Management Science Society Conference
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• 2004.05a
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• pp.726-729
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• 2004

본 논문은 최근 실시간 기업(RTE: Real-Time Enterprise)의 구현도구로 각광을 받고 있는 BPM(Business Process Management)을 위한 새로운 모니터링 기법을 소개한다. 본 논문의 방법론은 기존의 프로세스 모니터링 서비스의 한계를 극복하고 개인에 따라 차별화된 모니터링 환경을 제공한다. 제시된 모형은 모니터링 객체(monitoring objects), 분석기법(analysis methods), 표현 양식(presentation styles), 모니터링 이벤트(audit events)의 네 가지 축에 따라 모니터링 구성 요소들을 분해하고, 분해된 개별 단위들을 사용자가 자유롭게 조합하여 모니터링 서비스를 구성할 수 있도록 한다. 이는 기업의 경영자가 실시간으로 경영성과를 확인하도록 하고 추후의 경영활동에 반영하도록 하는 실시간 기업의 환경을 구축하도록 한다.

• Journal of Information Technology Services
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• v.9 no.2
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• pp.193-203
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• 2010

Service-Oriented Architecture (SOA) is a new trend for the design of application architecture to enhance the degree of share and reuse with the concept of service. It comes from the current situation where the business environments are changing rapidly and therefore competitions are getting bitter. To cope with such business challenges, business (and/or applications) architecture needs considerably flexibility and reusability, and that's why SOA is accepted as one of the most effective framework for the business applications in these days. In this paper we propose an analysis and design methodology for the applications of SOA. To implement the proposed methodology, the service ontology needs to be defined first, and the tasks such as service profiling, workflow design and service orchestration need to be followed. To validate the expected effects on flexibility and reusability, the proposed methodology was compared with CBD (Component Based Development).

• International conference on construction engineering and project management
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• 2005.10a
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• pp.1165-1170
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• 2005

This paper describes an information model, devised to manage roadway design information and to improve the collaboration among the multidisciplinary design teams. An analysis concerning the workflow, the rules and the functions of current roadway design was conducted. A process model based on the result of the analysis was developed by utilizing IDEF0 methodology. The process model reflects the interdependencies among multidisciplinary design disciplines and is capable of managing communication processes. This paper also discusses the design information hierarchy and the component representation schemes for systematic design information management. It is anticipated that the proposed information model would be able to improve the overall process of design of roadway construction projects by managing design information and helping the participants communicate and share information of the project effectively.

• Advances in Energy Research
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• v.6 no.1
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• pp.75-90
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• 2019

Anthropogenic greenhouse gas emissions are rising rapidly despite efforts to curb release of such gases. One long term potential solution to offset these destructive emissions is the capture and storage of carbon dioxide. Partially depleted hydrocarbon reservoirs are attractive targets for permanent carbon dioxide disposal due to proven storage capacity and seal integrity, existing infrastructure. Optimum well completion design in depleted reservoirs requires understanding of prominent geomechanics issues with regard to rock-fluid interaction effects. Geomechanics plays a crucial role in the selection, design and operation of a storage facility and can improve the engineering performance, maintain safety and minimize environmental impact. In this paper, an integrated geomechanics workflow to evaluate reservoir caprock integrity is presented. This method integrates a reservoir simulation that typically computes variation in the reservoir pressure and temperature with geomechanical simulation which calculates variation in stresses. Coupling between these simulation modules is performed iteratively which in each simulation cycle, time dependent reservoir pressure and temperature obtained from three dimensional compositional reservoir models in ECLIPSE were transferred into finite element reservoir geomechanical models in ABAQUS and new porosity and permeability are obtained using volumetric strains for the next analysis step. Finally, efficiency of this approach is demonstrated through a case study of oil production and subsequent carbon storage in an oil reservoir. The methodology and overall workflow presented in this paper are expected to assist engineers with geomechanical assessments for reservoir optimum production and gas injection design for both natural gas and carbon dioxide storage in depleted reservoirs.

• Journal of Applied Reliability
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• v.10 no.2
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• pp.93-105
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• 2010

The following thesis provides an explanation for the definition of the MIL-HDBK-2155 : Failure Reporting, Analysis and Corrective Action System (FRACAS), which systemizes the collection and analysis of failure data and the feedback process of the results. It also presents a plan based on MIL-HDBK-2155 for the collection and analysis of operating specifications on weapon systems. The collection and analysis of failure data and the feedback process utilizing FRACAS contributes to identifying improvement requirements during equipment operation as well as finding and eliminating the root cause of the failures. The objective of applying FRACAS to weapon systems is to receive source data feedback for reliability enhancements and performance improvements during operation. This is done by recognizing weaknesses in the design or operation by identifying the type of failures that might occur, and by performing Failure Modes, Effects and Criticality Analysis(FMECA) and Failure Tree Analysis(FTA).

• Korean Journal of Computational Design and Engineering
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• v.12 no.4
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• pp.308-320
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• 2007

A multi-agent and web based engineering framework concerning the automation of fatigue durability analysis for welded bogie frame of railway vehicles is presented. Mostly, this kind of design or analysis includes complex workflow, huge amounts of information processing, and problem solving. Macro programs of I-DEAS, APDL of ANSYS, and in-house fatigue code are utilized for parametric geometry representation, automatic mesh generation, static stress analysis, fatigue durability analysis, post-processing, and data sorting. The engineering framework is implemented on the JADE. Since every task requires a fairly complex process and specialized knowledge, the multi-agent based framework is very useful to keep the independency among several disciplines or tasks and to use distributed hardware and software resources. All engineering programs are integrated by XML wrapper. Related database of the engineering framework and web based user interfaces are also developed. A parametric study is carried out to take into account the effect of geometrical change of transom support bracket on its cumulative fatigue damage. The developed engineering framework reduced remarkably the time and costs required in designing and solving engineering problems.

• Genomics & Informatics
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• v.16 no.4
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• pp.36.1-36.3
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• 2018

Next generation sequencing (NGS), a high-throughput DNA sequencing technology, is widely used for molecular biological studies. In NGS, RNA-sequencing (RNA-Seq), which is a short-read massively parallel sequencing, is a major quantitative transcriptome tool for different transcriptome studies. To utilize the RNA-Seq data, various quantification and analysis methods have been developed to solve specific research goals, including identification of differentially expressed genes and detection of novel transcripts. Because of the accumulation of RNA-Seq data in the public databases, there is a demand for integrative analysis. However, the available RNA-Seq data are stored in different formats such as read count, transcripts per million, and fragments per kilobase million. This hinders the integrative analysis of the RNA-Seq data. To solve this problem, we have developed a web-based application using Shiny, COEX-seq (Convert a Variety of Measurements of Gene Expression in RNA-Seq) that easily converts data in a variety of measurement formats of gene expression used in most bioinformatic tools for RNA-Seq. It provides a workflow that includes loading data set, selecting measurement formats of gene expression, and identifying gene names. COEX-seq is freely available for academic purposes and can be run on Windows, Mac OS, and Linux operating systems. Source code, sample data sets, and supplementary documentation are available as well.