• Title/Summary/Keyword: Weight map

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Variance Component Quantitative Trait Locus Analysis for Body Weight Traits in Purebred Korean Native Chicken

  • Cahyadi, Muhammad;Park, Hee-Bok;Seo, Dong-Won;Jin, Shil;Choi, Nuri;Heo, Kang-Nyeong;Kang, Bo-Seok;Jo, Cheorun;Lee, Jun-Heon
    • Asian-Australasian Journal of Animal Sciences
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    • v.29 no.1
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    • pp.43-50
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    • 2016
  • Quantitative trait locus (QTL) is a particular region of the genome containing one or more genes associated with economically important quantitative traits. This study was conducted to identify QTL regions for body weight and growth traits in purebred Korean native chicken (KNC). F1 samples (n = 595) were genotyped using 127 microsatellite markers and 8 single nucleotide polymorphisms that covered 2,616.1 centi Morgan (cM) of map length for 26 autosomal linkage groups. Body weight traits were measured every 2 weeks from hatch to 20 weeks of age. Weight of half carcass was also collected together with growth rate. A multipoint variance component linkage approach was used to identify QTLs for the body weight traits. Two significant QTLs for growth were identified on chicken chromosome 3 (GGA3) for growth 16 to18 weeks (logarithm of the odds [LOD] = 3.24, Nominal p value = 0.0001) and GGA4 for growth 6 to 8 weeks (LOD = 2.88, Nominal p value = 0.0003). Additionally, one significant QTL and three suggestive QTLs were detected for body weight traits in KNC; significant QTL for body weight at 4 weeks (LOD = 2.52, nominal p value = 0.0007) and suggestive QTL for 8 weeks (LOD = 1.96, Nominal p value = 0.0027) were detected on GGA4; QTLs were also detected for two different body weight traits: body weight at 16 weeks on GGA3 and body weight at 18 weeks on GGA19. Additionally, two suggestive QTLs for carcass weight were detected at 0 and 70 cM on GGA19. In conclusion, the current study identified several significant and suggestive QTLs that affect growth related traits in a unique resource pedigree in purebred KNC. This information will contribute to improving the body weight traits in native chicken breeds, especially for the Asian native chicken breeds.

Depth Image Upsampling Algorithm Using Selective Weight (선택적 가중치를 이용한 깊이 영상 업샘플링 알고리즘)

  • Shin, Soo-Yeon;Kim, Dong-Myung;Suh, Jae-Won
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.21 no.7
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    • pp.1371-1378
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    • 2017
  • In this paper, we present an upsampling technique for depth map image using selective bilateral weights and a color weight using laplacian function. These techniques prevent color texture copy problem, which problem appears in existing upsamplers uses bilateral weight. First, we construct a high-resolution image using the bicubic interpolation technique. Next, we detect a color texture region using pixel value differences of depth and color image. If an interpolated pixel belongs to the color texture edge region, we calculate weighting values of spatial and depth in $3{\times}3$ neighboring pixels and compute the cost value to determine the boundary pixel value. Otherwise we use color weight instead of depth weight. Finally, the pixel value having minimum cost is determined as the pixel value of the high-resolution depth image. Simulation results show that the proposed algorithm achieves good performance in terns of PSNR comparison and subjective visual quality.

Mapping QTL for Grain Quality Traits Using an Introgression Line Population from a Cross between Ilpumbyeo and Moroberekan in Rice (일품벼/모로베레칸 이입계통을 이용한 미질특성 관련 QTL 분석)

  • Ju, Hong-Guang;Kim, Dong-Min;Oh, Chang-Sik;Kim, Myung-Ki;Kim, Kee-Jong;Ahn, Sang-Nag
    • Korean Journal of Breeding Science
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    • v.41 no.4
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    • pp.429-436
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    • 2009
  • We conducted a QTL analysis of grain quality traits using 117 $BC_3F_4$ and $BC_3F_5$ lines developed from a cross between Ilpumbyeo and Moroberekan. Genotypes of 117 $BC_3F_5$ lines were determined using 134 simple sequence repeat (SSR) markers. A linkage map constructed using 134 SSR markers was employed to characterize quantitative trait loci (QTL). The 117 $BC_3F_4$ and $BC_3F_5$ lines were evaluated for eleven grain quality traits in 2005 and 2006. A total of 18 QTLs were identified for eleven traits, and the phenotypic variance explained by each QTL ranged from 9.9% to 35.2%. Moroberekan alleles contributed positive effects in the Ilpumbyeo background at two QTL loci for 1,000 grain weight. Four QTLs, two for chalky rice and one each for 1,000 grain weight and head rice were consistently detected in two consecutive years indicating that these QTLs are stable. Clusters of QTLs were observed in three chromosome regions. One cluster harboring five QTLs including head rice and brown rice ratio near SSR markers RM190 and RM314 was detected on chromosome 6. Another cluster harboring grain weight and white belly was detected on chromosome 2. Increase in white belly at this locus might be due to the increase in grain weight due to the presence of the Moroberekan allele. The Moroberekan alleles at two QTL loci, gw3 and gw4 associated with increased grain weight might be useful in breeding programs to develop high-yielding cultivars.

LANDSLIDE SUSCEPTIBILITY MAPPING AND VERIFICATION USING THE GIS AND BAYESIAN PROBABILITY MODEL IN BOEUN, KOREA

  • Choi, Jae-Won;Lee, Sa-Ro;Yu, Young-Tae
    • Proceedings of the Korean Association of Geographic Inforamtion Studies Conference
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    • 2003.04a
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    • pp.100-100
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    • 2003
  • The purpose of this study is to reveals spatial relationships between landslides and geospatial data set, map the landslide susceptibility using the relationships and verify the landslide susceptibility using the landslide occurrence data in Bosun area in 1998. Landslide locations were detected from aerial photography and field survey and topography, soil, forest, and land use data sets were constructed as a spatial database using GIS. As the landslide occurrence factors, slope, aspect, curvature and type of topography, texture, material, drainage and effective thickness of soil, type, age, diameter and density of wood and land use were used. Is extract the relationship between landslides and geospatial database, Bayesian probability methods, likelihood ratio and weight of evidence, were applied and the ratio and contrast value that is W$\^$+/- W$\^$-/ were calculated. The landslide susceptibility index was calculated by summation of the likelihood ratio and contrast value and the landslide susceptibility maps were generated using the index. As a result, it is expected that spatial relationships between landslides and geospatial database is helpful to explain the characteristics of landslide and the landslide susceptibility map is used to reduce associated hazards, and to plan land use and construction.

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Depth Upsampler Using Color and Depth Weight (색상정보와 깊이정보 가중치를 이용한 깊이영상 업샘플러)

  • Shin, Soo-Yeon;Kim, Dong-Myung;Suh, Jae-Won
    • The Journal of the Korea Contents Association
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    • v.16 no.7
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    • pp.431-438
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    • 2016
  • In this paper, we present an upsampling technique for depth map image using color and depth weights. First, we construct a high-resolution image using the bilinear interpolation technique. Next, we detect a common edge region using RGB color space, HSV color space, and depth image. If an interpolated pixel belongs to the common edge region, we calculate weighting values of color and depth in $3{\times}3$ neighboring pixels and compute the cost value to determine the boundary pixel value. Finally, the pixel value having minimum cost is determined as the pixel value of the high-resolution depth image. Simulation results show that the proposed algorithm achieves good performance in terns of PSNR comparison and subjective visual quality.

Application of Linkage Disequilibrium Mapping Methods to Detect QTL for Carcass Quality on Chromosome 6 Using a High Density SNP Map in Hanwoo

  • Lia, Y.;Lee, J.H.;Lee, Y.M.;Kim, J.J.
    • Asian-Australasian Journal of Animal Sciences
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    • v.24 no.4
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    • pp.457-462
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    • 2011
  • The purpose of this study was to detect QTL for carcass quality on bovine chromosome (BTA) 6 using a high density SNP map in a Hanwoo population. The data set comprised 45 sires and their 427 Hanwoo steers that were born between spring of 2005 and fall of 2007. The steers that were used for progeny testing in the Hanwoo Improvement Center in Seosan, Korea, were genotyped with the 2,535SNPs on BTA6 that were embedded in the Illumina bovine SNP 50K chip. Four different linkage disequilibrium (LD) mapping models were applied to detect significant SNPs for carcass quality traits; the fixed model with a single marker, the random model with a single marker, the random model with haplotype effects using two adjacent markers, and the random model at hidden state. A total of twelve QTL were detected, for which four, one, three and four SNPs were detected on BTA6 under the respective models (p<0.001). Among the detected QTL, four, two, five and one QTL were associated with carcass weight, backfat thickness, longissimus dorsi muscle area, and marbling score, respectively (p<0.001). Our results suggest that the use of multiple LD mapping approaches may be beneficial in increasing power to detect QTL given a limited sample size and magnitude of QTL effect.

An Optimized PI Controller Design for Three Phase PFC Converters Based on Multi-Objective Chaotic Particle Swarm Optimization

  • Guo, Xin;Ren, Hai-Peng;Liu, Ding
    • Journal of Power Electronics
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    • v.16 no.2
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    • pp.610-620
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    • 2016
  • The compound active clamp zero voltage soft switching (CACZVS) three-phase power factor correction (PFC) converter has many advantages, such as high efficiency, high power factor, bi-directional energy flow, and soft switching of all the switches. Triple closed-loop PI controllers are used for the three-phase power factor correction converter. The control objectives of the converter include a fast transient response, high accuracy, and unity power factor. There are six parameters of the controllers that need to be tuned in order to obtain multi-objective optimization. However, six of the parameters are mutually dependent for the objectives. This is beyond the scope of the traditional experience based PI parameters tuning method. In this paper, an improved chaotic particle swarm optimization (CPSO) method has been proposed to optimize the controller parameters. In the proposed method, multi-dimensional chaotic sequences generated by spatiotemporal chaos map are used as initial particles to get a better initial distribution and to avoid local minimums. Pareto optimal solutions are also used to avoid the weight selection difficulty of the multi-objectives. Simulation and experiment results show the effectiveness and superiority of the proposed method.

Development of Analysis Program of Dynamic Characteristic for the Propulsion Shafting System (선박추진축계 동특성 분석 프로그램 개발)

  • Ha, Jeong-Min;Lee, Jeong-Myeong;Lee, Jeong-Hoon;Kim, Yong-Whi;Ahn, Byeong-Hyun;Choi, Byeong-Keun;Kim, Won-Chul
    • Journal of Power System Engineering
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    • v.18 no.2
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    • pp.57-61
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    • 2014
  • Due to the changes of marine transportation industry, it requires ship in larger scale and high speed. In order to operate efficiently, the engine should be work in high power and high horse power. The increase of the number of the propeller blades and the pitch of the screw and the weight, vibration of shafting problems occurs. To evaluate the safety of the system through analyzing the dynamic characteristics propulsion shafting system, was used to prove or to verify the Lalanne & Ferraris model validation.. It indicates that the Program through Campbell diagram and Critical speed map, Root rocus map, to ensure the reliability of the experimental model.

Design and Characteristic Analysis of Linear Oscillating Actuator with Structure (직선 왕복 액추에이터의 구조에 따른 설계 및 특성 검토)

  • Kim, Hae-Joong;Lee, Choong-Sung;Hong, Jung-Pyo
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.64 no.4
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    • pp.537-544
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    • 2015
  • This paper provided two types of design method on moving core type LOA and one type of design method on moving coil type LOA, and compared and examined each of its characteristics. In order to conduct parametric design process, voltage equation was used to schematize Lmin/K and L/M map, and the schematized map was used to determine Lmin, K or L, M. In order to meet requirements such as thrust force and input voltage and to satisfy the target values of Lmin, K or L, M, the types and sizes of each type were designed using geometry design process. 2-FEA was conducted for each of the designed model. After examining thrust force based on the location of the mover, Type-1 showed radical change in thrust force as movers moved, and Type-2 and Type-3 showed constant appearance of thrust force. The total volume of the designed LOA model was compared to select the model with highest thrust force density. Also, the weight of the mover for each model was compared in order to select the model that was predicted to have highest mechanical responsiveness and stroke characteristics.

Comparative randomized study of propofol target-controlled infusion versus sevoflurane anesthesia for third molar extraction

  • Chung, Patrick K;Dhanrajani, Parmanand
    • Journal of Dental Anesthesia and Pain Medicine
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    • v.18 no.3
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    • pp.169-175
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    • 2018
  • Background: The objective of this study was to compare hemodynamic and recovery characteristics of total intravenous anesthesia using propofol target-controlled infusion (TCI) versus sevoflurane for extraction of four third molar teeth. Methods: One hundred patients undergoing extraction of four third molar teeth under general anesthesia were randomized to one of two groups. Group 1 received propofol TCI-oxygen for induction and propofol TCI-oxygen-air for maintenance. Group II received a propofol bolus of 2 mg/kg for induction and sevoflurane-oxygen-air for maintenance. Heart rate, mean arterial pressure (MAP), operating time, time to emergence, nausea and vomiting, and sedation and pain scores were measured in each group. Results: Demographic data, including age, gender, weight, and height, were not significantly different between the two groups. The MAP was significantly higher after intubation (P = 0.007) and injection of anesthesia (P = 0.004) in the propofol group than in the sevoflurane group, with significant reflex bradycardia (P = 0.028). The mean time to emergence from anesthesia using propofol was 25 s shorter than that of sevoflurane (P = 0.02). Postoperatively, the propofol group was less sedated than the sevoflurane group at 30 min (0.02 versus 0.12), but this difference was not significant (P = 0.065). Conclusion: Both propofol TCI and sevoflurane are good alternatives for induction and maintenance of anesthesia for short day-case surgery. However, propofol TCI does not blunt the hemodynamic response to sudden, severe stimuli as strongly as sevoflurane, and this limitation may be a cause for concern in patients with cardiac comorbidities.