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검색결과 727건 처리시간 0.036초

VRML을 이용한 융합 영상에서 간질환자 발작 진원지의 3차원적 가시화와 위치 측정 구현 (Visualization and Localization of Fusion Image Using VRML for Three-dimensional Modeling of Epileptic Seizure Focus)

  • 이상호;김동현;유선국;정해조;윤미진;손혜경;강원석;이종두;김희중
    • 한국의학물리학회지:의학물리
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    • 제14권1호
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    • pp.34-42
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    • 2003
  • World Wide Web (WWW)에서 Virtual Reality Modeling Language (VRML)를 이용하는 3차원 (3D) 디스플레이는 사용자에게 직관적인 정보를 더 효과적으로 제공해 준다. 웹을 기반으로 하는 해부학적 영상과 융합되는 기능적 영상의 3D 가시화는 아직까지 체계적인 방식으로 연구가 활발히 진행되지 않았다. 이 연구의 목적은 2D 영상들과 함께 웹에서 VRML을 이용하여 구현되는 3D 해부학적 표면 영상들과 기능적 표면 영상들을 동시적으로 관찰할 수 있게 하고 VRML을 통해 만들어진 거리 측정 도구를 가지고 관심영역의 공간적인 위치 정보를 제공하는 것이다. 본 연구에서는 한 명의 간질 환자로부터 Magnetic Resonance (MR) 축면 영상과 발작기 및 발작간기 Single Photon Emission Computed Tomography (SPECT) 축면 영상들을 각각 획득하였다. 발작 진원지의 확인을 향상시키기 위해서 subtractionictal SPECT coregistered to MRI (SISCOM)을 수행하였다 SISCOM 결과로 나타난 각 2D 영상들은 모든 voxel들의 평균값 위로 1-표준편차와 2-표준편차에 해당하는 문턱 이상의 영상 값을 갖도록 하였다. SISCOM으로 나타나는 간질 발작 진원지들과 MRI 영상에서 회색질, 백색질 및 뇌척수액의 경계들을 각각 분할하고 marching cube 알고리즘에 의해 VRML 표면 영상들로 나타내었다. 축면 영상에서 실제 거리를 나타내는 x, y축의 길이를 획득하고 z축선의 길이를 계산하였다. VRML을 이용한 거리 측정도구를 만들어 이전의 VRML 표면 영상들과 융합하였다. MRI 영상을 이용하여 3D 표면 영상들의 단면을 나타내고 3D 표면 영상들의 투명도를 설정하기 위해 Java Script 루틴을 사용자 인터페이스 도구로서 삽입하였다 웹 페이지에서 구현되는 3D 표면 영상들의 투명도와 관찰 위치를 조절함에 따라 모델들 사이의 공간적인 정보를 직관적으로 알 수 있었다. 간질 발작 진원지에 대응하는 해부학적 구조를 3D 표면 영상들을 가로지르는 MRI 평면 영상들을 통해서 확인하였다 간질 발작 진원지는 뇌의 오른쪽 측두엽에서 나타났고 공간적으로 발작 진원지의 실제 위치를 VRML 거리 측정 도구에 의해 알 수 있었다. 결론적으로 본 연구에서 제시하는 웹에 근거한 3D 융합 영상의 가시화와 위치 측정은 진단 및 치료 방사선학과 외과학 등의 분야에서 온라인 방식의 연구와 교육에 있어 많은 도움을 줄 것이다.

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애기장대에서 고염 스트레스 내성에 관여하는 OSM1/SYP61 유전자의 동정 (Isolation of SYP61/OSMl that is Required for Salt Tolerance in Arabidopsis by T-DNA Tagging)

  • 김지연;백동원;이효정;신동진;이지영;최원균;김동균;정우식;곽상수;윤대진
    • Journal of Plant Biotechnology
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    • 제33권1호
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    • pp.11-18
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    • 2006
  • 고염 스트레스에 대한 연구는 농업 생산성에 직결되기 때문에, 고염에 대한 식물의 반응 및 신호전달, 적응기작은 중요한 연구주제가 되어 왔다. 현재까지 연구된 고염 스트레스에 대한 저항성 기작 및 유전학적 요소들이 많이 밝혀졌는데도 불구하고 아직 많은 연구를 필요로 하고 있다. 그래서 본 연구에서는 모델식물로 잘 알려진 애기장대에 pSK1015 vector로 T-DNA를 삽입하여 고염 스트레스에 대해 감수성을 보이는 돌연변이체, ssm1 돌연변이체를 선별하였다. ssm1 돌연변이체는 고염 스트레스를 받게 되면 이온의 독성 스트레스와 세포내 삼투압의 불균형에서 오는 스트레스에 대해 대조군에 비해 감수성을 보였다. ssm1 돌연변이체의 genomic DNA 상의 T-DNA가 삽입된 부위를 찾기 위하여 genomic DNA mutant library screening을 수행한 결과, 기존의 알려진 syntaxin 기능 및 환경 스트레스에 관련된 F3M18/AtSYP61/OSM1 임을 알 수 있었다.

유전자총을 이용한 형질전환 심비디움 식물체 생산체계 최적화 (Optimization of particle gun-mediated transformation system in Cymbidium)

  • 노희선;김미선;이유미;이이레;이상일;김종보
    • Journal of Plant Biotechnology
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    • 제38권4호
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    • pp.293-300
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    • 2011
  • 실험은 심비디움 원괴체 (PLB: protocorm-like bodies)를 재료로 유전자총을 이용한 효율적인 형질전환 조건을 확립하고자 수행되었다. 이 PLB 조직에 제초제저항성 유전자인 bar 유전자와 reporter 유전자인 gus를 포함하고 있는 pCAMBIA3301 벡터를 이용하여 유전자총으로 형질전환 하였다. 형질전환 벡터에 포함되어 있는 제초제저항성유전자 (bar)를 이용하여 선발하게 되므로 선발배지에 첨가될 제초제로서 PPT (Phosphinotricin)의 적정 농도를 찾고자 실험한 결과, 5 mg/l에서 최적의 대부분의 PLB의 생육이 억제되고 신초형성이 이루어지지 않았다. 이를 기반으로 유전자총 실험에 맞는 최적 조건을 찾는 실험을 수행하여 1.0 ${\mu}m$ gold입자크기, 헬륨가스 압력은 1,100과 1,350 psi사이에서는 차이가 없다는 전제 하에 물리적 피해가 덜 가는 1,100 psi를 조건으로 선택하였고, 유전자총과 목표물과의 거리는 6 cm 그리고 DNA 농도는 1회 유전자총 발사횟수당 1.0 ${\mu}g$ 조건을 최적조건으로 하였다. 이 조건을 기반으로 100개의 PLB를 형질전환 하면 평균적으로 6 ~ 8개의 PLB가 제초제 저항성을 나타내는 개체로 성장하고 최종적으로 2개체 정도가 온실에서 순화과정을 거쳐 완전한 형질전환 식물체로 생산된다. 이외에도 유전자총 실험 전에 0.2 M sorbitol과 0.2 M mannitol을 혼합처리하여 4시간 동안 배양시키면 2배 이상 효율을 높일 수 있게 되어, 결론적으로 100개의 PLB를 형질전환 수행하면 최종적으로 3.2 ~ 4.0개 정도의 형질전환 심비디움 식물체가 나오는 효율이라고 할 수 있다. 본 실험을 통해 생산된 형질전환 심비디움 개체들은 PCR 분석을 통해 유전자 도입을 확인하였고, 형질전환 개체 중 임의로 선발된 5계통들의 잎을 Basta 0.5% 용액에 침지한 결과, 3 계통은 제초제에 저항성을 가지는 것으로 확인되었고, 그중 1계통은 아주 강한 저항성을 보여주었다. 본 실험 결과들을 바탕으로 환경저항성 등의 유용유전자가 도입된 형질전환 심비디움 식물체 개발에 기여하리라 사료된다.

시설토마토에서 황색트랩을 이용한 담배가루이 표본조사법 (Sampling Plan for Bemisia tabaci Adults by Using Yellow-color Sticky Traps in Tomato Greenhouses)

  • 송정흡;이광주;양영택;이신찬
    • 한국응용곤충학회지
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    • 제53권4호
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    • pp.375-380
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    • 2014
  • 담배가루이, Bemisia tabaci는 바이러스병의 매개로 인해 제주지역 시설재배 토마토에서 가장 중요한 해충으로 인식되고 있다. 황색끈끈이 트랩을 이용한 담배가루이 성충의 실용적인 발생밀도 추정방법을 개발하기 위하여 2011과 2012년 제주 서부지역의 농가재배 토마토 포장에서 포장 상황에 따라 20~30개의 트랩을 설치하여 7~10일 간격으로 조사하였다. 황색끈끈이트랩을 지상 60 cm 높이에 수평방향으로 설치한 것이 작물 상단 10 cm 위에 수직으로 설치한 것보다 더 많은 담배가루이가 유인되었다. 황색끈끈이트랩에 유인된 담배가루이 성충의 분포형태를 Taylor's power law (TPL)과 Iwao's patchiness regression (IPR)을 이용 분석한 결과 두 회귀식의 기울기값이 모두 "1"보다 커 담배가루이 성충이 집중분포를 하고 있었다. TPL의 결정계수($r^2$)값이 IPR보다 더 높아 TPL이 담배가루이 성충의 공간분포 특성을 더 잘 설명하고 있었다. 담배가루이 성충 밀도를 추정하는데 필요한 황색끈끈이트랩의 수를 TPL 상수를 이용하여 추정하였는데 정확도 수준이 높을수록, 평균밀도가 낮을수록 필요한 트랩수는 증가하는 경향이었다. TPL 상수를 이용하여 고정 정확도 수준에서 조사를 중지하더라도 트랩당 평균밀도를 추정이 가능한 누적밀도를 계산하였다. 담배가루이 성충의 방제시기를 트랩 최고 밀도 10마리로 가정했을 때 이 밀도에서 필요한 포장당 트랩수는 고정정확도 0.25수준에서 15개이었다. 담배가루이 성충의 트랩당 평균밀도는 트랩마다 모든 성충수를 계수하는 것보다 2마리 이상 유인된 트랩의 비율을 가지고 추정하는 이항모델 [${\ln}(m)=1.19+0.90{\ln}(-{\ln}(1-p_T))$]을 이용하는 것이 더 효율적이었다. 본 연구결과는 담배가루이 성충에 대한 정확한 방제의사 결정을 통해 담배가루이가 매개하는 바이러스병 확산을 막는데 일조할 것으로 기대된다.

로우터리 맥류파종기 경운날의 개량시험 (Improvement of Rotary Tine for Barley Seeder Attached to Rotary Tiller)

  • 김성래;김문규;김기대;허윤근
    • Journal of Biosystems Engineering
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    • 제4권1호
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    • pp.1-23
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    • 1979
  • The use of barley seeder attached to rotary tiller in the rural area has a significant meaning not only for the solution of labor peak season, but also for the increase of land utilization efficiency. The facts that presently being used barley seeders are all based on the mechanical principles of the reverse rotation, center drive and are all using forward rotating tine, which is used to be easily and heavily worn out when it rotates reversely, raise problem of recommending them to rural area in Korea. Therefore, the main objective of the study was to develop new type of rotary tine attachable to barley seeders. To attain the objective the following approaches were applied. (1) The kinematic analysis of reverse rotating barley seeders. (2) The studies on the soil bin and artificial soil. (3) The comparative experiment on the power requirement of prototype tine. The results obtained from the studies are summarized as follow: 1. The kinematic analysis of barley seeder attached to rotary tiller: The following results were obtained from the kinematic analysis for deriving general formulae of the motion and velocity characterizing the rotary tine of barley seeders presently being used by farmers. a) The position vector (P) of edge point (P) in the rotary tine of reverse rotating, center drive was obtained by the following formula. $$P=(vt+Rcos wt)i+Rsin wt j+ \{ Rcos \theta r sin \alpha cos (wt- \beta +\theta r) +Rsin \theta r sin \alpha sin (wt-\beta + \theta r) \} lk $$ b) The velocity of edge point $(P^')$ of reverse rotating, center drive rotary tine was obtained by the following formula. $$(P^')=(V-wR sin wt)i+(w\cdot Rcoswt)j + \{ -w\cdot Rcos \theta r\cdot sin \alpha \cdot sin (wt-\beta +\theta r) + w\cdot Rsin \theta r\cdot sin \alpha \cdot cos (wt- \beta + \theta r \} k $$ c) In order to reduce the power requirement of rotary tine, the angle between holder and edge point was desired to be reduced. d) In order to reduce the power requirement, the edge point of rotary tine should be moved from the angle at the begining of cutting to center line of machine, and the additional cutting width should be also reduced. 2. The studies on the soil bin and artificial soil: In order to measure the power requirement of various cutting tines under the same physical condition of soil, the indoor experiments Viere conducted by filling soil bin with artificially made soil similar to the common paddy soil and the results were as follows: a) When the rolling frequencies$(x)$ of the artificial soil were increased, the densIty$(Y)$ was also increased as follows: $$y=1.073200 +0.070780x - 0.002263x^2 (g/cm^3)$$ b) The absolute hardness $(Y)$ of soil had following relationship with the rolling frequencies$(x)$ and were increased as the rolling frequencies were increased. $$Y=37.74 - \frac {0.64 + 0.17x-0. 0054x^2} {(3.36-0.17x + 0.0054x^2)^3} (kg/cm^3)$$ c) The density of soil had significant effect on the cohesion and angle of internal friction of soil. For instance, the soil with density of 1.6 to 1.75 had equivalent density of sandy loam soil with 29.5% of natural soil moisture content. d) The coefficient of kinetiic friction of iron plate on artificial soil was 0.31 to 0.41 and was comparable with that of the natural soil. e) When the pulling speed of soil bin was the 2nd forward speed of power tiller, the rpm of driving shaft of rotary was similar to that of power tiller, soil bin apparatus is indicating the good indoor tester. 3. The comparative experiment on the power requirement of prototype tine of reverse rotating rotary: According to the preliminary test of rotary tine developed with various degrees of angle between holder and edge pcint due to the kinematic analysis, comparative test between prototype rotary tine with $30 ^\circ $ and $10 ^\circ$ of it and presently being used rotary tine was carried out 2nd the results were as follows: a) The total cutting torque was low when the angle between holder and edge point was reduced. b) $\theta r$ (angle between holder and edge point) of rotary tine seemed to be one: of the factors maximizing the increase of torque. c) As the angle between holder and edge point ($\theta r$) of rotary tine was $30 ^\circ $ rather than $45 ^\circ $, the angle of rotation during cutting soil was reduced and the total cutting torque was accordingly reduced about 10%, and the reduction efficiency of total cutting torque was low when the angle between holder and edge point ($\theta r$) of rotary tine was $10 ^\circ $, which indicates that the proper angle between holder and edge point of rotary tine should be larger than $10 ^\circ $ and smaller than $30 ^\circ $ . From above results, it could be concluded that the use of the prototype rotary tine which reduced the angle between holder and edge point to $30 ^\circ $, insted of $45 ^\circ $, is disirable not only decreasing the power requirements, but also increasing the durabie hour of it. Also forward researches are needed, WIlich determine the optimum tilted angle of rotary brocket, and rearrangement of the rotary tine on the rotary boss.

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종자내 아미노산 합성 조절 유전자에 관한 연구 (Amino Acid Biosynthesis and Gene Regulation in Seed)

  • 임용표;서미정;조수진;이정희;이효연
    • 한국식물학회:학술대회논문집
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    • 한국식물학회 1996년도 제10회 식물생명공학심포지움 고등식물 발생생물학의 최근 진보
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    • pp.61-74
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    • 1996
  • Human and monogastric animals can not synthesize 10 out of the 20 amino asids and therefor need to obtain these from their diet. The plant seed is a major source of dietary protein. It is particular important in their study to increase nutritional quality of the seed storage proteins. The low contents of lysine, asparagine and threonenein various cereal seeds and of cystein and methionine. In legume seeds is due to the low proportions of these amino acids in the major storage proteins, we have tried to apply the three strategies; (1) mutagenesis and selection of specific amino acid analogue resistance, (2) cloning and expression study of lysine biosynthesis related gene, (3) transfomation of lysine rich soybean glycinin gene. The 5-methyltryptophan (5MT) resistant cell lines, SAR1, SAR2 and SAR3 were selected from anther derived callus of rice (Oryza sativa L. "Sasanishiki"). Among these selected cell lines, two (SAR1 and SAR3) were able to grow stably at 200 mg/L of 5MT. Analysis of the freed amino acids in callus shows that 5MT resistant cells (SAR3) accumulated free tryptophan at least up to 50 times higher than those that of the higher than of SAS. These results indicated that the 5MT resistant cell lines are useful in studies of amino acid biosynthesis. Tr75, a rice (Oryza sativa L., var. Sasanishiki) mutant resistant to 5MT was segregated from the progenies of its initial mutant line, TR1. The 5MT resistant of TR75 was inherited in the M8 generations as a single dominant nuclear gene. The content of free amino acids in the TR75 homozygous seeds increased approximately 1.5 to 2.0 fold compared to wild-type seeds. Especially, the contents of tryptophan, phenylalanine and aspartic acid were 5.0, 5.3 and 2.7 times higher than those of wild-type seeds, respectively. The content of lysine is significantly low in rice. The lysine is synthesized by a complex pathway that is predominantly regulated by feedback inhibition of several enzymes including asparginase, aspatate kinase, dihydrodipicolinat synthase, etc. For understanding the regulation mechanism of lysine synthesis in rice, we try to clone the lysine biosynthetic metabolism related gene, DHPS and asparaginase, from rice. We have isolated a rice DHPS genomic clone which contains an ORF of 1044 nucleotides (347 amino acids, Mr. 38, 381 daltons), an intron of 587 nucleotides and 5'and 3'-flanking regions by screening of rice genomic DNA library. Deduced amino acid sequence of mature peptide domain of GDHPS clone is highly conserved in monocot and dicot plants whereas that of transit peptide domain is extremely different depending on plant specie. Southern blot analysis indicated that GDHPS is located two copy gene in rice genome. The transcripts of a rice GDHPS were expressed in leaves and roots but not detected in callus tissues. The transcription level of GDHPS is much higher in leaves indicating enormous chloroplast development than roots. Genomic DNA clones for asparaginase genes were screened from the rice genomic library by using plaque hybridization technique. Twelve different genomic clones were isolated from first and second screening, and 8 of 12 clones were analyzed by restriction patterns and identified by Southern Blotting, Restriction enzyme digestion patterns and Southern blot analysis of 8 clones show the different pattern for asparaginase gene. Genomic Southern blot analysis from rice were done. It is estimated that rice has at least 2-3 copy of asparaginase gene. One of 8 positive clones was subcloned into the pBluescript SK(+) vector, and was constructed the physical map. For transformation of lysine rich storage protein into tobacco, soybean glycinin genes are transformed into tobacco. To examine whether glycinin could be stably accumulated in endosperm tissue, the glycinin cDNA was transcriptionally fused to an endosperm-specific promotor of the rice storage protein glutelin gene and then introduced into tobacco genomic via Agrobacterium-mediated transformation. Consequently the glycinin gene was expressed in a seed-and developmentally-specific manner in transgenic tobacco seeds. Glycinin were targeted to vacuole-derived protein bodies in the endosperm tissue and highly accumulated in the matrix region of many transgenic plant (1-4% of total seed proteins). Synthesized glycinin was processed into mature form, and assembled into a hexamer in a similar manner as the glycinin in soybean seed. Modified glycinin, in which 4 contiguous methionine residues were inserted at the variable regions corresponding to the C - teminal regions of the acidic and basic polypeptides, were also found to be accumulated similarly as in the normal glycinin. There was no apparent difference in the expression level, processing and targeting to protein bodies, or accumulation level between normal and modified glycinin. glycinin.

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인회석 박막 피복 도관과 Brain-derived neurotrophic factor(BDNF) 유전자 이입 슈반세포를 이용한 백서 좌골신경 재생에 관한 연구 (SCIATIC NERVE REGENERATION USING CALCIUM PHOSPHATE COATED CONDUIT AND BRAIN-DERIVED NEUROTROPHIC FACTOR GENE-TRANSFECTED SCHWANN CELL IN RAT)

  • 최원재;안강민;황순정;정필훈;김명진;김남열;유상배;장정원;김현만;김중수;김윤희;김성민;이종호
    • Journal of the Korean Association of Oral and Maxillofacial Surgeons
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    • 제31권3호
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    • pp.199-218
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    • 2005
  • Purpose of Study: Peripheral nerve regeneration depends on neurotrophism of distal nerve stump, recovery potential of neuron, supporting cell like Schwann cell and neurotrophic factors such as BDNF. Peripheral nerve regeneration can be enhanced by the conduit which connects the both sides of transected nerve. The conduit maintains the effects of neurotrophism and BDNF produced by Schwann cells which can be made by gene therapy. In this study, we tried to enhance the peripheral nerve regeneration by using calcium phosphate coated porous conduit and BDNF-Adenovirus infected Schwann cells in sciatic nerve of rats. Materials and Methods: Microporous filter which permits the tissue fluid essential for nerve regeneration and does not permit infiltration of fibroblasts, was made into 2mm diameter and 17mm length conduit. Then it was coated with calcium phosphate to improve the Schwann cell adhesion and survival. The coated filter was evaluated by SEM examination and MTT assay. For effective allogenic Schwann cell culture, dorsal root ganglia of 1-day old rat were extracted and treated with enzyme and antimitotic Ara-C. Human BDNF cDNA was obtained from cDNA library and amplified using PCR. BDNF gene was inserted into adenovirus shuttle vector pAACCMVpARS in which E1 was deleted. We infected the BDNF-Ad into 293 human mammary kidney cell-line and obtained the virus plaque 2 days later. RT-PCR was performed to evaluate the secretion of BDNF in infected Schwann cells. To determine the most optimal m.o.i of BDNF-Ad, we infected the Schwann cells with LacZ adenovirus in 1, 20, 50, 75, 100, 250 m.o.i for 2 hours and stained with ${\beta}$-galactosidase. Rats(n=24) weighing around 300g were used. Total 14mm sciatic nerve defect was made and connected with calcium phosphate coated conduits. Schwann cells$(1{\times}10^6)$ or BDNF-Ad infected Schwann cells$(1{\times}10^6)$ were injected in conduit and only media(MEM) was injected in control group. Twelve weeks after surgery, degree of nerve regeneration was evaluated with gait analysis, electrophysiologic measurements and histomorphometric analysis. Results: 1. Microporous Millipore filter was effective conduit which permitted the adhesion of Schwann cells and inhibited the adhesion of fibroblast. We could enhance the Schwann cell adhesion and survival by coating Millipore filter with calcium phosphate. 2. Schwann cell culture technique using repeated treatment of Ara-C and GDNF was established. The mean number of Schwann cells obtained 1 and 2 weeks after the culture were $1.54{\pm}4.0{\times}10^6$ and $9.66{\pm}9.6{\times}10^6$. 3. The mRNA of BDNF in BDNF-Ad infected Schwann cells was detected using RT-PCR. In Schwann cell $0.69\;{\mu}g/{\mu}l$ of DNA was detected and in BDNF-Adenovirus transfected Schwann cell $0.795\;{\mu}g/{\mu}l$ of DNA was detected. The most effective infection concentration was determined by LacZ Adenovirus and 75 m.o.i was found the most optimal. Conclusion: BDNF-Ad transfected Schwann cells successfully regenerated the 14mm nerve gap which was connected with calcium phosphate coated Millipore filter. The BDNF-Ad group showed better results compared with Schwann cells only group and control group in aspect to sciatic function index, electrophysiologic measurements and histomorphometric analysis.