• Journal of Microbiology and Biotechnology
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• v.20 no.3
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• pp.474-479
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• 2010

In this paper, we analyzed the microsatellites in the transcript sequences of the whole Laccaria bicolor genome. Our results revealed that, apart from the triplet repeats, length diversification and richness of the detected microsatellites positively correlated with their repeat motif lengths, which were distinct from the variation trends observed for the transcriptional microsatellites in the genome of higher plants. We also compared the microsatellites detected in the genic regions and in the nongenic regions of the L. bicolor genome. Subsequently, SSR primers were designed for the transcriptional microsatellites in the L. bicolor genome. These SSR primers provide desirable genetic resources to the ectomycorrhizae community, and this study provides deep insight into the characteristics of the micro satellite sequences in the L. bicolor genome.

• 한국균학회소식:학술대회논문집
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• 2014.05a
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• pp.19-19
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• 2014

This study included the analysis of mushroom data collected from Mt. Chiak in Gangwon-do using various methods. Former studies of Korean mushrooms are limited by regional characters and there is less species diversity among the regions. This study tried to find a way for the forecast of mushroom distribution and appearance by indexes of species diversity. The indexes used in this study include the number of fungi (N), the number of species (S), similarity index (C), richness index (R1, R2), variety index (V1, V2), evenness index (E1, E2, E3, E4, E5), and dominance index (D1) to analyze variety of species diversity. Analyses of data of fungi using a multistage cluster sampling indicate that the average value of C for years was higher than the average value of C for areas. The mushrooms consisted of 208 species in 686 individuals in limited fungal collection from 2002 to 2003. One hundred thirty nine species in 393 individuals were collected in 2002, and 122 species 293 individuals were collected in 2003. The individuals collected in 2003 were smaller than 2002's individuals. Similarity, richness, and variety indexes' values of 2003 were reduced than 2002's values but dominance index of 2003 was increased than 2002's value. Generally the species diversity of the environment to evaluate the index of similarity, richness, and variety was a higher index; dominance index was lower than that of the surrounding environment, suggesting a good diversity. As a result, the occurrence of mushrooms in the surrounding environment and the various factors seem fell in 2002 compared to 2003. The majority genus of the limited fungal collection was Mycena genus in 63 individuals; the majority species was Laccaria laccata in 34 individuals. Ninety three species in 106 individuals were collected by the extended collection and the majority genus of the extended collection was Amanita genus in 17 individuals; the majority species was Amanita citrina (Schaeff.) Pers. which was found in 5 individuals. This demonstrates that periodical similarity's value was 0.159 is higher than special similarity's 0.119. This indicates that the probability of the appearance of same mushrooms in the same area in following year is higher than the probability of the appearance of same mushrooms in the surrounding area in same year. The value of coefficient of variation (CV), in which the amount of change is much or less by N is higher than the CV value by S. CV value of dominance index(D) was the highest r point among other indexes, and evenness index (E) was the lowest point among other indexes. The correlation matrix with 66 combinations between the indexes, the combinations with correlations was 46 combinations. These results revealed that indexes of R1, V2, and E1 were proper to represent species diversity of fungi based on the correlation matrix and the theory of statistical independence which means there is no or less mutual association. This research would contribute to the study about variable living creature by measuring method and in the future this would be used to figure out regulation about fungi with their correlation, values in ecosystem, develop improving new models about agricultural fungi species and numbers by investigating agricultural variable species.

• Korean Journal of Environment and Ecology
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• v.22 no.3
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• pp.320-324
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• 2008

This study was conducted to investigate abundance of breeding birds in relation to forest environment, to figure out the influential factors in abundance of breeding birds and to get the basic data for effective management of the bird community in Jirisan National Park. For this purpose, this research selected 4 main hiking trails as survey points and conducted a survey on breeding bird species and forest environment from April to August in 2007. The study results are as follows: The number of the birds observed during the breeding season was 33 species at the elevation of 300 meters to 1,900 meters. This research made a regression analysis of 13 bird species appearing at more than 30% of all surveyed points, species richness, and richness in the number of individuals. As a result of making a simple and multiple regression analysis of the factors, among the forest environment factors, that have an effect on richness in bird species, each species was found to be less influenced by an elevation. In addition, this analysis revealed that among the forest environment factors, coverage of tree-1 layer(>12m), tree height, coverage of shrub layer(2${\sim}$0.5m), slope, coverage of subtree-2 layer(4${\sim}$2m) appeared as more influential ones on the variation of abundance in more species than an elevation itself. That explains why it is necessary to continuously maintain and manage the coverage of tree-1 layer(>12m), tree height, coverage of shrub layer(2${\sim}$0.5m), slope, and coverage of subtree-2 layer$(4{\sim}2m)$, etc. for the preservation and management of bird species in a breeding season at Jirisan National Park.

• Asian-Australasian Journal of Animal Sciences
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• v.28 no.4
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• pp.584-591
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• 2015

This study characterized the fecal bacterial community structure and inter-individual variation in 30-week-old Duroc pigs, which are known for their excellent meat quality. Pyrosequencing of the V1-V3 hypervariable regions of the 16S rRNA genes generated 108,254 valid reads and 508 operational taxonomic units at a 95% identity cut-off (genus level). Bacterial diversity and species richness as measured by the Shannon diversity index were significantly greater than those reported previously using denaturation gradient gel electrophoresis; thus, this study provides substantial information related to both known bacteria and the untapped portion of unclassified bacteria in the population. The bacterial composition of Duroc pig fecal samples was investigated at the phylum, class, family, and genus levels. Firmicutes and Bacteroidetes predominated at the phylum level, while Clostridia and Bacteroidia were most abundant at the class level. This study also detected prominent inter-individual variation starting at the family level. Among the core microbiome, which was observed at the genus level, Prevotella was consistently dominant, as well as a bacterial phylotype related to Oscillibacter valericigenes, a valerate producer. This study found high bacterial diversity and compositional variation among individuals of the same breed line, as well as high abundance of unclassified bacterial phylotypes that may have important functions in the growth performance of Duroc pigs.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.47 no.3
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• pp.264-273
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• 2014

To investigate species composition and seasonal variation of demersal organisms in the coastal waters off the Taean peninsula, otter trawl surveys were conducted from April 2010 to January 2011. A total of 75 species were collected, including 44 species of Pisces, 19 species of Crustacea, 6 species of Cephalopoda, 4 species of Gastropoda, and 1 species each of Bivalvia and Echinoidea. The dominant species in each season were Palaemon gravieri in spring, Charybdis bimaculata in summer, Loligo japonica in autumn, and Crangon hakodatei in winter. The number of species, individuals and biomass were highest in autumn and lowest in winter. The diversity index was highest in summer and lowest in winter. The dominance index was highest in winter and lowest in summer. The richness index was highest in autumn and lowest in winter. The evenness index was highest in summer and lowest in autumn. A cluster analysis showed that demersal organisms were divided into two groups; spring and winter organisms (Group 1) and summer and autumn organisms (Group 2). We detected a significant difference (P<0.05) between these groups, mainly owing to Platycephalus indicus, Repomucenus koreanus, and Paralichthys olivaceus within Pisces: Trachysalambria curvirostris, Metapenaeopsis dalei, P. gravieri, and C. hakodatei within Crustacea: and L. japonica within Cephalopoda.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.43 no.6
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• pp.693-704
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• 2010

Seasonal variation in species composition around Dokdo, East Sea of Korea, was investigated using trammel-net catches, from 2006 to 2009. A total of 53 fish species belonging to 23 families in 12 orders were captured; the orders Perciformes (12 families, 22 species) and Scorpaeniformes (four families, 22 species) were dominant. Between 2008 and 2009, 43 species were collected by trammel net. The number of species was highest in August 2009 (25 species) and lowest in February 2009 (11 species). The number of individuals and total biomass peaked in November 2009. Diversity indices for fish catches were highest in August 2008 (2.4368) and lowest in November 2009 (0.4253). The dominant species were Thamnaconus modestus and Sebastes schlegeli. Hierarchical clustering analysis showed five fish groups, with frequency and number of individuals similar to results of correspondence analysis (CA), which showed a closer relationship to the year term than the season term. CA showed that temperature was an important factor influencing fish species richness and abundance. Three main fish assemblage types coexisted around Dokdo: an East Sea coastal fish assemblage, a subtropical fish assemblage, and a cold water fish assemblage.

• Korean Journal of Soil Science and Fertilizer
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• v.46 no.3
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• pp.163-172
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• 2013

The aquatic insect collected at six areas (each 2 for mountain area, plain field, and urban area) from 2009 to 2011 were classified to analyze the distribution and diversity of species. Frequency (number of aquatic insect: N), number of species (S), similarity index (C), richness index (R1, R2), variety index (V1, V2), evenness index (E1, E2, E3, E4, E5), and dominance index (D1) were investigated. Total N and S were 143 and 84, respectively. C matrix of 153 combinations was constructed with the average of 0.542. The average C of 3 years (0.659) was 9.9% P, more higher than the average C of 6 areas (0.560). The average values of the index of 18 plots were 2.28, 0.17, 1.24, 1.08, 0.07, 0.06, 0.01, 0.87, 0.31, 0.93 for R1, R2, V1, V2, E1, E2, E3, E4, E5, D1, respectively. The order in the coefficient of variation (CV) of the indicator for 18 plots was N (70.0%) > E3 (54.9%) > E1 (49.6%) > R2 (40.5%) > S (35.3%) > R1 (33.7%) > E2 (28.4%) > E5 (15.9%) > V1 (11.1%) > E4 (6.3%) > V2 (5.1%) > D1 (4.8%). The correlation matrix with 66 combinations between the indexes was constructed with statistical significance for 33 combinations. However, R1, V1, E2 and D1 were the proper indexes to represent species diversity of aquatic insect based on the correlation matrix and the theory of statistical independence. The richness index was highest in mountain, variety index in urban area, and evenness index in plain field. However, the dominance index was lowest in urban area.

• ALGAE
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• v.33 no.3
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• pp.269-278
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• 2018

Ocean warming can have significant negative impacts on population genetic diversity, local endemism and geographical distribution of a wide range of marine organisms. Thus, the identification of conservation units with high risk of extinction becomes an imperative task to assess, monitor, and manage marine biodiversity for policy-makers. Here, we surveyed population structure and genetic variation of the red seaweed Gracilaria vermiculophylla along the coast of China using genome-based amplified fragment length polymorphism (AFLP) scanning. Regardless of analysis methods used, AFLP consistently revealed a south to north genetic isolation. Populations at the southern coast of China showed unique genetic variation and much greater allelic richness, heterozygosity, and average genetic diversity than the northern. In particular, we identified a geographical barrier that may hinder genetic exchange between the two lineages. Consequently, the characterized genetic lineage at the southern coast of China likely resulted from the interplay of post-glacial persistence of ancestral diversity, geographical isolation and local adaptation. In particular, the southern populations are indispensable components to explore evolutionary genetics and historical biogeography of G. vermiculophylla in the northwestern Pacific, and the unique diversity also has important conservation value in terms of projected climate warming.

• Journal of Welding and Joining
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• v.5 no.4
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• pp.36-46
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• 1987

The impact toughness and SCC resistance of duplex stainless steel weldment made by GTAW, GMAW and SMAW processes was studied. The impact toughness of GTA weld metal was higher than that of GMA weld metal which contained more ferrite phase than GTA weld metal. The impact toughness of SMA weld metal was the lowest due to the harmful effect of inclusions inspite of richness of more ductile austenite phase. From these facts, it can be concluded that the important factors determining the weld metal toughness were the amount of ferrite phase and the cleaness of weld metal. While the SCC resistance of SMA weld metal was lower than that of base metal and nay other weld metal, the SCC resistance of GMA and GTA weld metal was higher than that of base metal but that of all the HAZ's were lower than that of base metal. Therefore, the impact toughness and SCC resistance of GTA and GMA weldment was pretty good as long as phase ratio was propertly controlled. Although the phase ratio was controlled, SMA weld metal could not get a good combination because the lack of shielding from the environment results in a high content of inclusions in weld metal.

• Journal of Forest and Environmental Science
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• v.37 no.2
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• pp.128-140
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• 2021

Tropical dry forests are one of the most threatened, widely distributed ecosystems in tropics and estimation of forest biomass is a crucial component of global carbon emission estimation. Therefore, the present study was aimed to quantify the biomass and carbon storage in trees on large scale (10, 1 ha plots) in the dry mixed evergreen forest of Javadhu forest of Eastern Ghats. Biomass of adult (≥10 cm DBH) trees was estimated by non-harvest methods. The total biomass of trees in this tropical dry mixed evergreen forest was ranged from 160.02 to 250.8 Mg/ha, with a mean of 202.04±24.64 Mg/ha. Among the 62 tree species enumerated, Memecylon umbellatum accumulated greater biomass and carbon stocks (24.29%) more than the other species in the 10 ha study plots. ANOVA revealed that there existed a significant variation in the total biomass and carbon stock among the three plant types (Evergreen, brevi-deciduous and deciduous (F (2, 17)=15.343, p<0.001). Basal area and density was significant positively correlated with aboveground biomass (R² 0.980; 0.680) while species richness exhibited negative correlation with above ground biomass (R² 0.167). Finding of present study may be interpreted as most of the trees in this forest are yet to be matured and there is a net addition to standing biomass leading to carbon storage.