• 제목/요약/키워드: Unreported species

검색결과 122건 처리시간 0.019초

Twelve unrecorded UV-resistant bacterial species isolated in 2020

  • Kim, Ju-Young;Maeng, Soohyun;Park, Yuna;Lee, Sang Eun;Han, Joo Hyun;Cha, In-Tae;Lee, Ki-eun;Kim, Myung Kyum
    • Journal of Species Research
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    • 제10권4호
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    • pp.321-335
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    • 2021
  • In 2020, a total of 12 bacterial strains were isolated from soil after a comprehensive investigation of indigenous prokaryotic species in Korea. It was determined that each strain belonged to independent and predefined bacterial species, with high 16S rRNA gene sequence similarity (>98.7%) and formation of a robust phylogenetic clade with the closest species. This study identified four families in the phylum Actinobacteria, two families in the phylum Proteobacteria, one family in the phylum Bacteroidetes one family in the phylum Firmicutes; and four species in the family Nocardiaceae, two species in the family Nocardioidaceae, one species in the family Cellulomonadaceae, one species in the family Hymenobacter, one species in the family Methylobacteriaceae, one species in the family Microbacteriaceae, one species in the family Bacillaceae and one species in the family Sphingomonadaceae. There is no official report of these 12 species in Korea, so they are described as unreported bacterial species in Korea in this study. Gram reaction, basic biochemical characteristics, colony, and cell morphology are included in the species description section.

Isolation of wild yeasts from soils collected in Pochoen-si, Korea and characterization of unrecorded yeasts

  • Maeng, Soohyun;Park, Yuna;Srinivasan, Sathiyaraj
    • Journal of Species Research
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    • 제9권3호
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    • pp.204-209
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    • 2020
  • In 2019, as a subset study to discover indigenous yeast species in Korea, a total of 20 yeast species were isolated from soil samples collected in Pochoen-si. Among them, eight strains were unreported species. From the high 26S rRNA gene sequence similarity and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to independent and predefined yeast species. The 20 strains were assigned to the genera Aureobasidium (1 strain) and Meyerozyma (1 strain) of the phylum Ascomycota and Cystofilobasidium (2 strains), Filobasidium (1 strain), Naganishia (2 strains), Bullera (3 strains), Leucosporidium (9 strains) and Sampaiozyma (1 strain) of the phylum Basidiomycota. There is no official report of the following species in Korea: Leucosporidium creatinivorum (4 strains), Leucosporidium escuderoi(2 strains), Leucosporidium golubevii(1 strain) and Leucosporidium intermedium (2 strains). Basic biochemical characteristics, colony and cell morphology are also described in the species description section.

A report on 29 unrecorded bacterial species isolated from the Nakdonggang River, Republic of Korea

  • Ahyoung Choi;Ja Young Cho;Soo-Yeong Lee;Ji Young Jung;Kiwoon Baek;Seoni Hwang;Eui-Jin Kim;Jaeduk Goh
    • 환경생물
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    • 제42권2호
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    • pp.143-157
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    • 2024
  • As part of the research program "Freshwater Prokaryotic Organisms Research and Discovery," freshwater samples were collected from the Nakdonggang River. After plating the samples on several culture media and incubating aerobically, approximately 900 bacterial strains were isolated and identified using 16S rRNA gene sequences. Among the bacterial isolates showing higher than 98.7% 16S rRNA gene sequence similarity with those of already confirmed bacterial species previously unreported in Korea, 29 strains were selected. These strains were phylogenetically diverse and belonged to 3 phyla, 6 classes, 13 orders, and 21 genera. At the genus level, these previously unreported species were found to be affiliated with Novosphingobium, Sphingomonas, Polymorphobacter, Croceibacterium, Devosia, Endobacterium, Agaricicola, Bradyrhizobium, Paracoccus, and Pseudotabrizicola of the class Alphaproteobacteria; Undibacterium, Azonexus, and Dechloromonas of the class Betaproteobacteria; Acinetobacter and Budvicia of the class Gammaproteobacteria; Streptomyces, Nocardioides, Mycobacterium, and Cellulomonas of the phylum Actinomycetota; Flavobacterium and Pedobacter of the phylum Bacteroidota. These species were further characterized by examining their Gram reaction, colony and cell morphologies, biochemical properties, and phylogenetic positions. Detailed descriptions of these 29 previously unreported species are provided.

Isolation of ten unrecorded yeasts from soil in Korea

  • Han, Joo Hyun;Oh, Hye Jin;Lee, Sang Eun;Kim, Myung Kyum
    • Journal of Species Research
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    • 제10권4호
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    • pp.336-343
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    • 2021
  • In 2020, as a subset study to discover indigenous yeast species in Korea, a total of 22 yeast species were isolated from soil samples collected in Gwangju-si, Gyeonggi-do. Among them, 10 strains were unreported species. From the high 26S rRNA gene sequence similarity and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged independent and predefined yeast species. The 22 strains were assigned to the genera Dothiora (1 strain), Sarocladium (1 strain), Tetrapisispora (1 strain) and Torulaspora (2 strains) of the phylum Ascomycota; the genera Erythrobasidium (1 strain), Leucosporidium (4 strains), Ustilentyloma (2 strains), Fellozyma (1 strain), Sampaiozyma (2 strains), Filobasidium (1 strain), Solicoccozyma (2 strains) and Vishniacozyma (4 strains) of the phylum Basidiomycota. This is the first official report of the following species in Korea: Dothiora cannabinae (1 strain), Sarocladium strictum (1 strain), Fellozyma inositophila (1 strain), Filobasidium magnum (1 strain), Solicoccozyma phenolicus (1 strain), Solicoccozyma terreus(1 strain), Vishniacozyma tephrensis(1 strain) and Vishniacozyma victoriae (3 strains). Cell morphology, phenotypic features and biochemical features are described in the Species Description section.

Isolation and characterization of two unrecorded yeast species in the order Filobasidiales

  • Inyoung Choi;Sathiyaraj Srinivasan
    • Journal of Species Research
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    • 제13권1호
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    • pp.100-104
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    • 2024
  • The purpose of this study was to isolate and identify wild yeasts from soil samples collected in Daegu and Cheongju city, Republic of Korea. To identify the wild yeast strains, pairwise sequence comparisons of D1/D2 region of the 26S rRNA gene sequence were done using Basic Local Alignment Search Tool (BLAST). The cell morphologies were observed by phase contrast microscope and assimilation test are done using API 20C AUX kit. All strains were assigned to the phylum Basidiomycota. Among 13 strains, 11 strains were previously reported, but two strains were unreported from the Republic of Korea. The two unrecorded yeast strains, GW1-3 and PG1-1-10C, belong to the genus Solicoccozyma (family Piskurozymaceae, order Filobasidiales, class Tremellomycetes). The two strains had oval-shaped and polar budding cells. This research showed the morphological and biochemical properties of the two unreported yeast species that had not officially reported in Korea.

New records to the Korean soil dwelling Mesostigmata fauna (Acari)

  • Kontschan, Jeno;Jeon, Mi Jeong;Hwang, Jeong Mi;Seo, Hong Yul
    • Journal of Species Research
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    • 제4권1호
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    • pp.33-44
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    • 2015
  • A total of 34 species belonging to 11 families and 21 genera in the Order Mestostigmata are reported from the Korean Peninsula, of which 20/34 species are new for the fauna of the Korean Peninsula (Lasioseius furcisetus Athias-Henriot, 1959, Cheiroseius nepalensis Evans & Hyatt, 1960, Cheiroseius curtipes (Halbert, 1923), Hypoaspis imitatus Reitblat, 1963, Hypoaspis presternalis Willmann, 1949, Hypoaspis kargi Costa, 1968, Pseudoparasitus placentulus (Berlese, 1887), Gamasiphis novipulchellus Ma & Yin, 1998, Parholaspulus bregetovaae Alexandrov, 1965, Parholaspulus paradichaetes Petrova, 1967, Neparholaspis arcuatus Petrova, 1977, Neparholaspus simplex Evans, 1956, Parholaspulus excentricus Petrova, 1967, Gamasholapis asiaticus Petrova, 1967, Veigaia carpillaris Tseng, 1994, Veigaia anmashanensis Tseng, 1994, Leptogamasus bicorniger Witalinski, 1977, Neogamasus insignis (Holzman, 1969), Iphidinychus kakumeiensis Hiramatsu & Hirschmann, 1992, Trigonuropoda sanguinea Hirschmann & Hiramatsu, 1977). A total of 19 of the previously unreported species were collected in soil samples from the Democratic People's Republic of Korea (DPRK), while 13 species were collected from soil samples from the Republic of Korea (ROK). Only two species were found in both the DPRK and the ROK. Illustrations and short descriptions for previously unreported species provided.

우포 습지에 분포하는 수지상균근균 포자의 다양성 (Spore Diversity of Arbuscular Mycorrhizal Fungi in Upo Wetland)

  • 고강문;박혁;가강현;엄안흠
    • 한국균학회지
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    • 제47권1호
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    • pp.19-27
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    • 2019
  • 우포 습지에 서식하는 식물의 근권 토양에서 수지상균근균(AMF) 포자를 추출하였다. 추출한 포자는 형태적 특성과 18S rDNA 염기서열의 분자적 분석을 이용해 동정하였다. 그 결과 6속 9종의 AMF 포자가 분리된 것을 확인하였으며, 종 다양성 지수를 계산하여 분석한 결과 습지에서 AMF 포자의 종 다양성은 식물에 의해 영향을 받는 것을 확인하였다. 연구 과정에서 국내 미기록종 1종을 확인하였으며, 확인된 종은 Diversispora epigaea이다. 미기록종 AMF 포자의 형태적 특성 및 분자적 분석의 결과에 대해 서술하였다.

Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea

  • Han, Joo Hyun;Maeng, Soohyun;Park, Yuna;Lee, Sang Eun;Lee, Byoung-Hee;Lee, Ki-eun;Kim, Myung Kyum
    • Journal of Species Research
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    • 제9권2호
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    • pp.85-104
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    • 2020
  • In 2019, after a comprehensive investigation of indigenous prokaryotic species in Korea, a total of 12 bacterial strains assigned to the phylum Proteobacteria were isolated from soil. With the high 16S rRNA gene sequence similarity (>98.8%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to independent, predefined bacterial species. This study identified two species in the family Burkholderiaceae, one species in the family Comamonadaceae, two species in the family Oxalobacteraceae, one species in the family Micrococcaceae, one species in the family Bradyrhizobiaceae, one species in the family Methylobacteriaceae, one species in the family Rhizobiaceae, one species in the family Rhodocyclaceae, and one species in the family Sphingomonadaceae. There is no official report about these 12 species in Korea, so are described as unreported bacterial species in Korea in this study. Gram reaction, basic biochemical characteristics, colony, and cell morphology are also described in the species description section.

Three Alternaria Species Pathogenic to Sunflower

  • Cho, Hye-Sun;Yu, Seung-Hun
    • The Plant Pathology Journal
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    • 제16권6호
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    • pp.331-334
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    • 2000
  • Alternaria helianthi and two unreported species of Alternaria in Korea were isolated from lesions of Alternaria leaf spot disease of sunflower. The unrecorded species of Alternaria were identified as A. helianthinficients and A. protenta based on the morphological characteristics of conidiophores and conidia. A. helianthi was the dominant species, although all the three species were associated with the disease. A. helianthi, A. helianthinficiens and A. protenta produced similar symptoms on detached sunflower leaves. This is the first report of A. helianthinficiens and A. protenta pathogenic on sunflower in Korea.

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Description of unrecorded wild yeasts from soil in Republic of Korea under cold conditions

  • Soohyun Maeng;Sathiyaraj Srinivasan
    • Journal of Species Research
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    • 제13권2호
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    • pp.142-146
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    • 2024
  • The purpose of this study was to isolate and identify wild yeasts from soil collected in Daegu City and Cheongyang County, Republic of Korea. Among 11 strains isolated in this study, nine strains were previously reported and two strains were unreported in Republic of Korea. To identify wild yeast strains, pairwise sequence comparisons of the D1/D2 region of the 26S rRNA gene sequence were done using Basic Local Alignment Search Tool (BLAST). The cell morphologies were observed by phase contrast microscope and assimilation test are done using API 20C AUX kit. All strains were assigned to the phylum Basidiomycota. Of the two unrecorded yeast strains, CY-9-10C belongs to the genus Mrakia (family Mrakiaceae, order Cystofilobasidiales, class Tremellomycetes) and PG3-4-10C belongs to the genus Slooffia (family Chrysozymaceae, order Microbotryomycetes incertae sedis, class Microbotryomycetes). Both strains had oval-shaped and polar budding cells. This research described the morphological and biochemical properties of the two unreported yeast species that had not officially reported in Korea.