• Title/Summary/Keyword: U-phase

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Heterologous Expression and Optimized One-Step Separation of Levansucrase via Elastin-like Polypeptides Tagging System

  • Kang, Hye-Jin;Kim, Jin-Hee;Chang, Woo-Jin;Kim, Eung-Soo;Koo, Yoon-Mo
    • Journal of Microbiology and Biotechnology
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    • v.17 no.11
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    • pp.1751-1757
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    • 2007
  • Elastin-like polypeptides (ELPs) undergo a reversible inverse phase transition upon a change in temperature. This thermally triggered phase transition allows for a simple and rapid means of purifying a fusion protein. Recovery of ELPs-tagged fusion protein was easily achieved by aggregation, triggered either by raising temperature or by adding salt. In this study, levansucrase has been used as a model enzyme in the development of a simple one-step purification method using ELPs. The levansucrase gene cloned from Pseudomonas aurantiaca S-4380 was tagged with various sizes of ELPs to functionally express and optimize the purification of levansucrase. One of two ELPs, ELP[V-20] or ELP[V-40], was fused at the C-terminus of the levansucrase gene. A levansucrase-ELP fusion protein was expressed in Escherichia coli $DH5{\alpha}$ at $37^{\circ}C$ for 18 h. The molecular masses of levansucrase-ELP[V-20] and levansucrase-ELP[V-40] were determined as 56 kDa and 65 kDa, respectively. The phase transition of levansucrase-ELP[V-20] occurred at $20^{\circ}C$ in 50 mM Tris-Cl (pH 8) buffer with 3 M NaCl added, whereas the phase transition temperature ($T_t$) of levansucrase-ELP[V-40] was $17^{\circ}C$ with 2 M NaCl. Levansucrase was successfully purified using the phase transition characteristics of ELPs, with a recovery yield of higher than 80%, as verified by SDS-PAGE. The specific activity was measured spectrophotometrically to be 173 U/mg and 171 U/mg for levansucrase-ELP[V-20] and levansucrase-ELP[V-40], respectively, implying that the ELP-tagging system provides an efficient one-step separation method for protein purification.

GA-based Two Phase Method for a Highly Reliable Network Design (높은 신뢰도의 네트워크 설계를 위한 GA 기반 두 단계 방법)

  • Jo, Jung-Bok
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.9 no.5
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    • pp.1149-1160
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    • 2005
  • Generally, the network topology design problem, which is difficult to solve with the classical method because it has exponentially increasing complexity with the augmented network size, is characterized as a kind of NP-hard combinatorial optimization problem. The problem of this research is to design the highly reliable network topology considering the connection cost and all-terminal network reliability, which can be defined as the probability that every pair of nodes can communicate with each other. In order to solve the highly reliable network topology design problem minimizing the construction cost subject to network reliability, we proposes an efficient two phase approach to design reliable network topology, i.e., the first phase employs, a genetic algorithm (GA) which uses $Pr\ddot{u}fer$ number for encoding method and backtracking Algorithm for network reliability calculation, to find the spanning tree; the second phase is a greedy method which searches the optimal network topology based on the spanning ree obtained in the first phase, with considering 2-connectivity. finally, we show some experiments to demonstrate the effectiveness and efficiency of our two phase approach.

물류/유통산업의 u-Business 전략계획 방법론에 관한 연구

  • Sin, Hyeon-Dong;Im, Chun-Seong;Jeon, Nam-Ju;Cha, Jong-Hyeok
    • Proceedings of the Korean Operations and Management Science Society Conference
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    • 2005.05a
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    • pp.497-505
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    • 2005
  • RFID를 활용하여 기업 공급망의 효율성을 향상하고자 하는 기업들이 늘고 있지만, 이들이 적용할 만한 가이드라인이 부재한 실정이다. 이에 대하여 본 연구에서는 물류/유통산업의 RFID 기반 u-Business 전략계획 방법론을 제시하였다. 본 방법론은 기존의 정보화 전략계획 방법론의 기본 절차를 따라 '도입전략 수립-현행체계 분석-목표체계 수립-통합 이행계획 수립'의 단계(Phase)를 기반으로 하여, 유비쿼터스 컴퓨팅 환경의 적용을 위해 기술도입 타당성 분석, 공급망 분석, 목표기업 벤치마킹, Pilot테스트, u-Business 전략계획 평가에 관하여 특화되었다. 제시된 방법론은 기존의 정보화 전략계획 방법론과의 비교를 통하여 타당성을 검증하였다.

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Characteristics of High Density U-Mo Alloy Powder Prepared by Centrifugal Atomization

  • Kim, Ki-Hwan;Ahn, Hyeon-Seok;Lee, Don-Bae;Park, Hee-Dae;Kim, Chang-Kyu;Baek, Kyeong-Wook
    • Proceedings of the Korean Nuclear Society Conference
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    • 1996.05c
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    • pp.213-218
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    • 1996
  • Characteristics of high density U-Mo alloy powder prepared by centrifugal atomization have been examined. The results indicate that the majority of the atomized U-Mo alloy particles has a smooth surface and frequently near-perfect spheroidal shape with few satellites attached. The size distribution of atomized U-Mo alloy powder shows the mono-modal size distribution seen in ligament disintegration mechanism. All phases of atomized alloy powder below 150$\mu\textrm{m}$ irrespectively to particle size are found to be ${\gamma}$-U (cubic structure) phases with isotropic structure and not to be U$_2$Mo phase at all. The microstructure of atomized U-Mo alloy particulates has micro-crystalline structure with non-dendritic gram supersaturated with Mo element. Also the grain size of ${\gamma}$ -U tends to decrease with the decrease of the powder diameter.

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A Triple Residual Multiscale Fully Convolutional Network Model for Multimodal Infant Brain MRI Segmentation

  • Chen, Yunjie;Qin, Yuhang;Jin, Zilong;Fan, Zhiyong;Cai, Mao
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.14 no.3
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    • pp.962-975
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    • 2020
  • The accurate segmentation of infant brain MR image into white matter (WM), gray matter (GM), and cerebrospinal fluid (CSF) is very important for early studying of brain growing patterns and morphological changes in neurodevelopmental disorders. Because of inherent myelination and maturation process, the WM and GM of babies (between 6 and 9 months of age) exhibit similar intensity levels in both T1-weighted (T1w) and T2-weighted (T2w) MR images in the isointense phase, which makes brain tissue segmentation very difficult. We propose a deep network architecture based on U-Net, called Triple Residual Multiscale Fully Convolutional Network (TRMFCN), whose structure exists three gates of input and inserts two blocks: residual multiscale block and concatenate block. We solved some difficulties and completed the segmentation task with the model. Our model outperforms the U-Net and some cutting-edge deep networks based on U-Net in evaluation of WM, GM and CSF. The data set we used for training and testing comes from iSeg-2017 challenge (http://iseg2017.web.unc.edu).

Rheology and morphology of concentrated immiscible polymer blends

  • Mewis, Jan;Jansseune, Thomas;Moldenaers, Paula
    • Korea-Australia Rheology Journal
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    • v.13 no.4
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    • pp.189-196
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    • 2001
  • The phase morphology is an important factor in the rheology of immiscible polymer blends. Through its size and shape, the interface between the two phases determines how the components and the interface itself will contribute to the global stresses. Rheological measurements have been used successfully in the past to probe the morphological changes in model blends, particularly for dilute systems. For more concentrated blends only a limited amount of systematic rheological data is available. Here, viscosities and first normal stress differences are presented for a system with nearly Newtonian components, the whole concentration range is covered. The constituent polymers are PDMS and PIB, their viscosity ratio can be changed by varying the temperature. The data reported here have been obtained at 287 K where the viscosities of the two components are identical. By means of relaxation experiments the measured stresses are decomposed into component and interfacial contributions. The concentration dependence is quite different for the two types of contribution. Except for the component contributions to the shear stresses there is no clear indication of the phase inversion. Plotting either the interfacial shear or normal stresses as a function of composition produces in some cases two maxima. The relaxation times of these stresses display a similar concentration dependence. Although the components have the same viscosity, the stress-component curves are not symmetrical with respect to the 50/50 blend. A slight elasticity of one of the components seems to be the cause of this effect. The data for the more concentrated blends at higher shear rates are associated with a fibrillar morphology.

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Properties of $YBa_2{Cu_3}O_{7-X}$ superconducting thin films prepared by visible light pulsed laser (기사광선 펄스 레이저에 의해 제작된 $YBa_2{Cu_3}O_{7-X}$초전도체 박막의 특성)

  • 신현용
    • Electrical & Electronic Materials
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    • v.7 no.4
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    • pp.289-293
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    • 1994
  • Thin films of YB $a_{2}$C $u_{3}$$O_{7-x}$ supercondYB $a_{2}$C $u_{3}$$O_{7-x}$uctor were prepared on (100) SrTi $O_{3}$ substrates by pulsed laser deposition using visible light laser. Q-switched Nd:YAG(532 nm, 30 ns) pulsed laser was used for deposition. The effects of substrate temperature and oxygen pressure during deposition on films were studied. Critical current density of 2.93*10$^{6}$ A/c $m^{2}$ at 77K and Tc(zero)=91.7K were obtained from the film prepared with Tsub=745.deg. C and $P_{02}$=200 mTorr. XRD analysis showed that the grown film has c-axis normal orientation to the substrate surface and has single phase. Surface morphology of the film has been improved by interfering the plume ejected from YB $a_{2}$C $u_{3}$$O_{7-x}$ target.arget.t.

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Reduced Addamycin Cytotoxicity in RIF-1 Multicell Spheroid Due to an Acidic Microenvironment

  • Um, Kyung-Il;Cheston, Sally B.;Suntharalingam, Mohan;Rhee, Juong-G.
    • Environmental Mutagens and Carcinogens
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    • v.17 no.1
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    • pp.7-11
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    • 1997
  • Variations in adriamycin uptake and cytotoxicity were studied in tumor cells that were grown in different growth states and microenvironments. RIF-1 tumor cells were maintained in an RPMI 1640 medium, and grown in either a monolayer or multicell spheroids. For exponentially growing cells, adriamycin cytotoxicity increased with increased dosage up to 2.5 $\mu$g/ml, and this cytotoxicity was reduced when the cells were grown in a plateau phase or in an acidic microenvironment (pH 6.6). This reduced cytotoxicity was correlated with the uptake of the drug. For multicell spheroids, the cytotoxicity of the drug was reduced dramatically, and this reduction was also correlated with a reduced uptake of the drug and an acidic pH inside of the spheroids. When the drug cytotoxicity was evaluated at different locations within the spheroids, the cells in the inner regions were least affected by the drug, suggesting that both an acidic microenvironment and noncycling plateau phase cells are contributing factors in decreasing the efficacy of the drug in an organized tissue, such as multicell spheroids.

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Factors affecting the protoplast formation and regeneration of Bacillus pumilus and Cellulomonas fimi for intergeneric protoplast fusion

  • Kim, D.M.;Lee, K.H.
    • Proceedings of the Korean Society for Applied Microbiology Conference
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    • 1986.12a
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    • pp.527.3-527
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    • 1986
  • Several factors predicted to affect the protoplast formation and regeneration were investigated. The optimum lysozyme, casamino acid and PVP concentration were 0.5 (mg/$m\ell$), 0.1 (%) and 1.5(%). In B. pumilus, Penicillin-G treatment concentration was 0.3 (U/$m\ell$) and optimum treatment period was transit log. phase. And in the case of Celm. fimi, 0.3 (U/$m\ell$) and initial log. phase. Osmotic stabilizer and di-cation for OSM medium of B.pumilus and Gelm .fimi were 25mM CaCl2, 0.5M sodium sucinate and 50mM MgCl$_2$, 100mM CaCl$_2$, 0.4M sodium succinate. The regeneration frequency of B.pumilus and Celm. fimi were 14.6(%) and 6.9(%).

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Dynamic Behavior of Rigid Circular Foundation in Water-Saturated Transversely Isotropic Layered Stratum (지하수로 포화된 가로등방성 층상지반에 설치된 강체 원형 기초의 동적 거동)

  • Lee, Jin-Ho;Park, Jung-Jun;Kim, Jae-Kwan;Jin, Byeong-Moo
    • Proceedings of the Earthquake Engineering Society of Korea Conference
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    • 2005.03a
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    • pp.47-51
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    • 2005
  • If a structure is founded on the ground saturated with pore water, then the ground should be modeled as a saturated two-phase porous medium for accurate earthquake response analysis. In this study, an axisymmetric transmitting boundary hyperelement is developed for modeling of far field of the ground using u-U formulation for water-saturated transversely isotropic layered stratum. The developed hyperelement is verified by comparing the dynamic stiffness of rigid circular foundation on water-saturated isotropic layered stratum with the case of using equivalent single-phase medium model.

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