• Title/Summary/Keyword: Tropical plant

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Discrimination and Authentication of Eclipta prostrata and E. alba Based on the Complete Chloroplast Genomes

  • Kim, Inseo;Park, Jee Young;Lee, Yun Sun;Lee, Hyun Oh;Park, Hyun-Seung;Jayakodi, Murukarthick;Waminal, Nomar Espinosa;Kang, Jung Hwa;Lee, Taek Joo;Sung, Sang Hyun;Kim, Kyu Yeob;Yang, Tae-Jin
    • Plant Breeding and Biotechnology
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    • v.5 no.4
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    • pp.334-343
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    • 2017
  • Eclipta prostrata and E. alba are annual herbal medicinal plants and have been used as Chinese medicinal tonics. Both species are widely distributed in tropical and subtropical regions as well as in Korea. Both species have similar morphological features but E. alba has smoother leaf blade margins compared with E. prostrata. Although both species are utilized as oriental medicines, E. prostrata is more widely used than E. alba. Morphological semblances have confounded identification of either species. Here, we report the complete chloroplast genomes of both species to provide an authentication system between the two species and understand their diversity. Both chloroplast genomes were 151,733-151,757 bp long and composed of a large single copy (83,285-83,300 bp), a small single copy (18,283-18,346 bp), and a pair of inverted repeats (25,075-25,063 bp). Gene annotation revealed 80 protein coding genes, 30 tRNA genes and four rRNA genes. A phylogenetic analysis revealed that the genus Eclipta is grouped with Heliantheae tribe species in the Asteraceae family. A comparative analysis verified 29 InDels and 58 SNPs between chloroplast genomes of E. prostrata and E. alba. The low chloroplast genome sequence diversity indicates that both species are really close to each other and are not completely diverged yet. We developed six DNA markers that distinguish E. prostrata and E. alba based on the polymorphisms of chloroplast genomes between E. prostrata and E. alba. The chloroplast genome sequences and the molecular markers generated in this study will be useful for further research of Eclipta species and accurate classification of medicinal herbs.

Development of high yield rice of long grain type adaptable to South-East Asia tropical region

  • Cho, YC;Baek, MK;Park, HS;Nam, JK;Jeong, JM;Kim, WJ;Shin, WC;Song, YC;Cho, JH;Lee, JY;Kim, CS;Park, HG;Kim, BK
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2017.06a
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    • pp.339-339
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    • 2017
  • The long grain rice varieties adaptable to South-east Asia tropical regions were tried to develop in Cambodian Agriculture Research and Development Institute (CARDI), Cambodia. The final goal is to develop rice varieties which can culture in diverse environmental conditions of tropical regions of South-east Asia under climate change. We collected and evaluated for agronomic traits of 131 rice germplasm from Cambodia, China, India, Indonesia, Myanmar, Philippines and Vietnam in CARDI. We selected core germplasm including leading varieties of target countries and made 813 F1 cross combinations between leading varieties of each country and promising germplasm of high yield potential, resistance to biotic/abiotic stresses, aromatic rice, and so on. Out of 607 F1s evaluated to heading date, plant type, agronomic traits, and grain type, 106 F1s selected and advanced to F2 populations. 106 F2 populations were evaluated to major agronomic traits, grain type and yield-component traits, and selected 2,560 plants in 62 F2 populations. During six seasons in 2014~2016, the lines of F3 subsequent-generation were cultured a total of 6,256 lines. In yield trial for promising lines in F5 generation, the growth duration from sowing to harvesting was 97~114 days. These lines were 88~129 in number of grain per panicle, an average of 84.6% in the range of 79.3~91.9% in the percentage of ripened grain and 17.5~22.8g in 1000-brown rice weight. The rough rice yields were in the range of 4.33~6.06 ton/ha with an average of 5.23 ton/ha. The yield was increased to 5~47% than Chulsa and 12~41% than IR66. Five lines, KR54-28-1, KR55-14-2, KR57-5-2, KR67-57-2 and KR128-19-1 were 5.33~6.06 ton/ha in rough rice yield. These high yield potential lines would be evaluated to adaptability in Cambodia, Laos, Myanmar and Vietnam during 2017.

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Development of high yield rice of long grain type adaptable to South-East Asia tropical region

  • Cho, YC;Baek, MK;Park, HS;Nam, JK;Jeong, JM;Kim, WJ;Shin, WC;Song, YC;Cho, JH;Lee, JY;Kim, CS;Park, HG;Kim, BK
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2017.06a
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    • pp.155-155
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    • 2017
  • The long grain rice varieties adaptable to South-east Asia tropical regions were tried to develop in Cambodian Agriculture Research and Development Institute (CARDI), Cambodia. The final goal is to develop rice varieties which can culture in diverse environmental conditions of tropical regions of South-east Asia under climate change. We collected and evaluated for agronomic traits of 131 rice germplasm from Cambodia, China, India, Indonesia, Myanmar, Philippines and Vietnam in CARDI. We selected core germplasm including leading varieties of target countries and made 813 F1 cross combinations between leading varieties of each country and promising germplasm of high yield potential, resistance to biotic/abiotic stresses, aromatic rice, and so on. Out of 607 F1s evaluated to heading date, plant type, agronomic traits, and grain type, 106 F1s selected and advanced to F2 populations. 106 F2 populations were evaluated to major agronomic traits, grain type and yield-component traits, and selected 2,560 plants in 62 F2 populations. During six seasons in 2014~2016, the lines of F3 subsequent-generation were cultured a total of 6,256 lines. In yield trial for promising lines in F5 generation, the growth duration from sowing to harvesting was 97~114 days. These lines were 88~129 in number of grain per panicle, an average of 84.6% in the range of 79.3~91.9% in the percentage of ripened grain and 17.5~22.8g in 1000-brown rice weight. The rough rice yields were in the range of 4.33~6.06 ton/ha with an average of 5.23 ton/ha. The yield was increased to 5~47% than Chulsa and 12~41% than IR66. Five lines, KR54-28-1, KR55-14-2, KR57-5-2, KR67-57-2 and KR128-19-1 were 5.33~6.06 ton/ha in rough rice yield. These high yield potential lines would be evaluated to adaptability in Cambodia, Laos, Myanmar and Vietnam during 2017.

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Termite Resistance of The Less Known Tropical Woods Species Grown in West Java, Indonesia

  • Febrianto, Fauzi;Pranata, Andi Zaim;Septiana, Dea;Arinana, Arinana;Gumilang, Adiyantara;Hidayat, Wahyu;Jang, Jae-Hyuk;Lee, Seung-Hwan;Hwang, Won-Joung;Kim, Nam-Hun
    • Journal of the Korean Wood Science and Technology
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    • v.43 no.2
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    • pp.248-257
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    • 2015
  • This research focused on the natural durability of twenty one lesser known tropical wood species planted in West Java, Indonesia against subterranean termite (Coptotermes curvignathus). It was observed that both heartwood and sapwood of Kiara payung (Filicium decipiens); heartwoods of Nangka (Arthocarpus heterophyllus), Mahoni (Swietenia macrophylla) and Simpur (Dillenia grandifolia); and sapwood of Bungur (Lagerstroemia speciosa) were rated as resistant (natural durability class II) according to Indonesian standard SNI 01.7207.2006 (BSN 2006). Both heartwood and sapwood of Salam (Syzigium polyanthum), Pasang (Lithocarpus sundaicus), Bisbul (Diospyros discolor), Rukam (Flacourtia rukam) and Trembesi (Samanea saman); heartwood of Puspa (Schima walichii), Bungur, Tanjung (Mimusops elangi) and Angsana (Pterocarpus indicus) were rated as moderately resistant (natural durability class III). Both heartwood and sapwood of Sungkai (Peronema canescens), Pine (Pinus merkusii), Mangium (Acacia mangium) and Afrika (Maesopsis eminii); sapwoods of Mahoni, Puspa and Tanjung were rated as poorly resistant (natural durability class IV). Both heartwood and sapwood of Agathis (Agathis dammara), Durian (Durio zibethinus), Ki sampang (Evodia latifolia) and Jabon (Anthocephalus cadamba); sapwoods of Nangka and Angsana were rated as very poorly resistant (natural durability class V). This reserach showed that woods with lower resistance against C. curvignathus attack (natural durability class IV and V) tend to have lower termite mortality values compared to woods with higher resistance against C. curvignathus attack (natural durability class II and III). Results of the study will provide some valuable information on termite resistance of twenty one lesser known tropical wood species planted in Indonesia.

Tyrosinase and α-Glucosidase Inhibitory Activities and Antioxidant Effects of Extracts from Different Parts of Hypochaeris radicata (서양금혼초 부위별 추출물의 티로신에이즈, α-글루코시다아제 저해활성 및 항산화효과)

  • Ko, Hyun Min;Eom, Tae Kil;Song, Seon Kyung;Jo, Ga Yeong;Kim, Ju Sung
    • Korean Journal of Medicinal Crop Science
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    • v.25 no.3
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    • pp.139-145
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    • 2017
  • Background: Invasion of these invasive plants in the ecosystem threatens the habitat of endemic species, reduces biodiversity, and causes a disturbance in the ecological system. Hypochaeris radicata L. (Asteraceae), the most invasive plant in Korea, particularly in Jeju Island, invades farmlands, and autochthonous forests, resulting in the establishment of monocultures and modification of the ecosystem structure. Methods and Results: In this study was, we evaluated the biological activity of 70% ethanolic extracts from different parts of Hypochaeris radicata L. The biological activities of 70% ethanolic extracts of different parts, such as flower, leaf, stem, and root, of H. radicata were investigated. The total polyphenol content was highest in flower extracts ($50.82{\pm}3.16mg{\cdot}QE/g$). In addition, the highest flavonoid content was observed in flower extract ($15.19{\pm}2.03mg{\cdot}QE/g$). The flower extract of H. radicata exhibited stronger DPPH radical-scavenging activities, ABTS radical scavenging activities, and reducing power than the other parts. The flower extract of H. radicata was observed to have the highest tyrosinase and ${\alpha}-glucosidase$ inhibitory activities. Conclusions: The flower extracts of H. radicata exhibited remarkable antioxidant activity as well as tyrosinase and ${\alpha}-glucosidase$ inhibitory effects. These activities might be related to the phenolic compounds present in the H. radicata flower extract.

Evaluation on the Environmental and Social Value Awareness of the Heat Supply for the Horticultural Greenhouse using Thermal Effluents from Power Plant (화력발전소 온배수열 활용 시설하우스 열공급에 대한 환경 및 사회적 가치 인식 비교 분석)

  • Kim, Ga-Hee;Ahn, Cha-Soo;Um, Byung-Hwan
    • Journal of The Korean Society of Agricultural Engineers
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    • v.60 no.5
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    • pp.125-134
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    • 2018
  • Recently, interest in alternative energy has been increasing to reduce greenhouse gas emissions and fossil fuel consumption in accordance with the United Nations Framework Convention on Climate Change(UNFCCC). Accordingly, there is a need to use waste heat that unused throughout industrial systems for lowering the concentration of energy on fossil fuels. In particular, government support projects for the energy recycling of agriculture and fisheries such as cultivation of tropical crops and aquaculture are being actively carried out by utilizing waste heat and thermal effluents caused from large-scale industrial complexes including power plants. The study was conducted on supplier (power plant), consumer (farmer) and stakeholders (constructor and local governments) of domestic demonstration areas using waste heat that is abandoned from the power plant in the form of thermal effluents. It investigated the overall improvement and feasibility of government funded projects through field interviews and questionnaire-type surveys. The results of this study are expected to provide basic directions for the operation of the project in terms of nationwide expansion and diffusion of the heat source supply project at horticultural greenhouse by utilizing the thermal effluents from power plant.

Protective Effects of Nypa fruticans Wurmb against Oxidative DNA Damage and UVB-induced DNA Damage

  • So-Yeon Han;Tae-Won Jang;Da-Yoon Lee;Seo-Yoon Park;Woo-Jin Oh;Se Chul Hong;Jae-Ho Park
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2023.04a
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    • pp.54-54
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    • 2023
  • Nypa fruticans Wurmb (N. fruticans) is a plant that belongs to Araceae and N. fruticans is mainly found in tropical mangrove systems. The parts (leaves, stems, and roots) of N. fruticans are traditionally used for asthma, sore throat, and liver disease. N. fruticans contains flavonoids and polyphenols, which are substances that have inhibitory effects on cancer and oxidant. In previous studies, some pharmaceutical effects of N. fruticans on melanogenesis and inflammation have been reported. The present study is conducted to investigate the effect of the ethyl acetate fraction of N. fruticans (ENF) on oxidative DNA damage and UVB-induced DNA damage. DNA damage response (DDR) pathway is important in research on cancer, apoptosis, and so on. DDR pathways are considered a crucial factor affecting the alleviation of cellular damage. ENF could reduce oxidative DNA damage derived from reactive oxygen species by the Fenton reaction. Also, ENF reduced the intensity of intracellular ROS in the live cell image by DCFDA assay. UVB is known to cause skin and cellular damage, then finally contribute to causing the formation of tumors. As for the strategies of reducing DNA damage by UVB, inhibition of p53, H2AX, and Chk2 can be important indexes to protect the human body from DNA damage. As a result of confirming the protective effect of ENF for UVB damage, MMPs significantly decreased, and the expression of apoptosis-related factors tended to decrease. In conclusion, ENF can provide protective effects against double-stranded DNA break (DSB) caused by oxidative DNA damage and UVB-induced DNA damage. These results are considered to be closely related to the protective effect against radicals based on catechin, epicatechin, and isoquercitrin contained in ENF. Based on these results, it is thought that additional mechanism studies for inhibiting cell damage are needed.

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Variation of Leaflet Traits and Their Association with Agronomic Traits of Soybean Germplasm (콩 유전자원의 소엽형질 변이와 농업형질과의 관계)

  • Yeong Ho, Lee;Yung Kuang, Huang
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.42 no.5
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    • pp.640-646
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    • 1997
  • To determine variations in leaflet length (LL), leaflet width (LW), leaflet size (LS), and leaflet shape index (LSI), and their association with eight agronomic traits, characterization data of 884 soybean accessions which were grown in the autumn of 1992 in Taiwan were analyzed. LL ranged from 4.3 to 14.7 cm, and LW ranged from 2.8 to 9.7 cm. Also, LS (LL $\times$ LW) ranged from 12.1 to 124.6 $\textrm{cm}^2$. The absolute variation of LL, LW, and LS was not large because of limitation in vegetative growth by short day length. None was classified as a large leaflet based on the International Board for Plant Genetic Resources (IBPGR) descriptors. LSI (LL /LW) ranged from 1.21 to 3.06, and three accessions were classified as narrow leaflet. There were differences in ranges and means of LL, LW, LS, and LSI between and within temperate and tropical accessions. LL, LW, LS, and LSI had highly significant positive correlations with seven agronomic traits and highly significant negative correlation with 100-seed weight except LW for all accessions. There was variation in the closeness of association among leaflet traits, and between and within temperate and tropical accessions. Generally, LL, LW, and LS were more closely associated with days to flowering, plant height at $R_1$ and $R_8$, number of pods per plant; LSI was more closely associated with 100-seed weight than other traits.

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Plant Cultivation System using Arduino (아두이노를 활용한 식물재배 시스템에 대한 연구)

  • Kim, Minju;Park, jin Woo;Jang, Donghwan;Kim, Sihyun;Yoon, Hosik;Lee, Sungjin;Moon, Sangho
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2021.05a
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    • pp.386-388
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    • 2021
  • According to data from the World Meteorological Organization (WMO) in 2019, the global average temperature between 2015 and 2019 increased by 1.1℃ compared to the pre-industrial period (1850-1900). If the average temperature rises by 1.5℃, the occurrence of natural disasters such as extreme high temperatures, heavy rains and droughts will increase, and this change will intensify depending on the speed and size of warming. Due to the effects of global warming, global surface temperatures have gradually risen, and tropical fruits, which could only be grown in tropical regions, can be seen in Korea. According to the 5th report released by the IPCC of the Intergovernmental Panel on Climate Change under the United Nations, the world's average temperature will rise 3.7 degrees Celsius at the end of the 21st century (2081-2100). If the temperature rises gradually, it is believed that Korea's current cultivation area, which can produce good quality fruit, could be turned into an unfavorable area in the future. This paper aims to develop a plant cultivation system that utilizes Arduino to provide a customized environment for the growth of plants desired by growers.

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Variability in Ash, Crude Protein, Detergent Fiber and Mineral Content of Some Minor Plant Species Collected From Pastures Grazed by Goats

  • Serra, A.B.;Serra, S.D.;Orden, E.A.;Cruz, L.C.;Nakamura, K.;Fujihara, T.
    • Asian-Australasian Journal of Animal Sciences
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    • v.10 no.1
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    • pp.28-34
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    • 1997
  • This study was conducted to determine the protein content, cell wall fractions, and mineral concentrations of some minor plant species collected for one year in pastures grazed by goats in the Philippines. An assessment of nutrient variability and a comparison of forage protein and mineral concentrations to the critical value of protein and minerals based on animal needs were also studied. The plant species were the following: grasses(Axonopus compressus, Eleusine indica, Rottboellia exaltata); legumes (Aeschynomene indica, Calopogonium muconoides, Desmodium tortousum); and herbs (Corchorus olitorius, Ipomea aquatica, Sida acuta, Synedrella nodiflora). The two seasons (dry and wet) were subdivided into Dry-1 (December to February, 132 mm total rainfall), Dry-2 (March to May, 25 mm total rainfall), Wet-1 (June to August, 1,138 mm total rainfall), and Wet-2 (September to November, 1,118 mm total rainfall). Results showed that significant differences were obtained on various nutrient fractions including those mineral concentrations across species. Across season, acid detergent lignin (ADL) had higher (p < 0.05) value at Dry-1. Legumes and herbs were higher in crude protein (CP) especially Sida acuta. Grasses showed the highest neutral detergent fiber (NDF) and acid detergent fiber (ADF) with the addition of Sida nodiflora (herb) for it contained high NDF. Aeschynomene indica contained the highest amount of ADL and the herbs (Ipomea aquatica and Sida acuta) had exceptionally high concentration of minerals. Coefficient variation of the various nutrient values ranged from 27.3 to 136.7%. Some forage minerals appeared to be deficient (sodium, phosphorus and copper) or excess (molybdenum) for the whole or part of the year. This study shows that some minor plant species could extend the range of concentration of some nutrients (i.e., CP and minerals) beyond that normally found in conventional pasture species.