• 제목/요약/키워드: Translation elongation factor 1 alpha

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Fusarium oxysporum Causes Root Rot on Gastrodia elata in Korea: Morphological, Phylogenetic, and Pathogenicity Analyses

  • Sang-A Lee;Eun-Kyung Bae;Chanhoon An;Min-Jeong Kang;Eung-Jun Park
    • 한국균학회지
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    • 제50권1호
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    • pp.41-46
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    • 2022
  • Gastrodia elata infected with root rot disease was collected from cultivated G. elata fields in Gimcheon, Korea, in 2018. G. elata tuber surfaces exhibited root rot disease symptoms of dark-grey lesions and white fungal mycelial growth. The fungus was isolated from symptomatic tubers and cultured. Based on morphological characteristics and molecular analysis of the internal transcribed spacer region of ribosomal DNA and translation elongation factor 1-alpha, the isolated fungus was Fusarium oxysporum. This is the first report of root rot caused by F. oxysporum on G. elata tubers in Korea.

Two new species of Trichoderma isolated from commercially grown oyster mushroom, Pleurotus ostreatus (oral)

  • Park, Myung-Soo;Seo, Geon-Sik;Bae, Kyung-Sook;Yu, Seung-Hun
    • 한국식물병리학회:학술대회논문집
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    • 한국식물병리학회 2003년도 정기총회 및 추계학술발표회
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    • pp.127.1-127
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    • 2003
  • We describe two new Trichoderma species associated with oyster mushroom in Korea. Trichoderma green mould has been one of the most serious diseases of oyster mushroom in Korea. Of these the predominant species are two unrecorded species. We designed as Trichoderma sp. Korean type 1 (Th K1) and Trichoderma sp. Korean type 2 (Th K2), respectively. Th K1 and Th K2 can be distinguished from previously reported Trichoderma species as well as each other in morphological characteristics including growth rate at 35$^{\circ}C$, colony morphology, conidia shape and branch pattern of phialides. Sequence of the ITS region of rDNA, the protein coding translation elongation factor gene(EF-1${\alpha}$), and RNA polymeraseII (RPB2) not only clearly separated Trichoderma sp. Korean types from their closely related T. harzianum biotype but also distinguished them from each other. Analyses of the EF-1${\alpha}$ and RPB2 sequences were found to be more useful for establishing systematic relationships among Trichoderma isolates than those of the ITS sequence. Based on the results of morphological and molecular characteristics. We propose the two Trichoderma sp. Korean types as the new species

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First Report on Fusarium Wilt of Zucchini Caused by Fusarium oxysporum, in Korea

  • Choi, In-Young;Kim, Ju-Hee;Lee, Wang-Hyu;Park, Ji-Hyun;Shin, Hyeon-Dong
    • Mycobiology
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    • 제43권2호
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    • pp.174-178
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    • 2015
  • Fusarium wilt of zucchini in Jeonju, Korea, was first noticed in May 2013. Symptoms included wilting of the foliage, drying and withering of older leaves, and stunting of plants. Infected plants eventually died during growth. Based on morphological characteristics and phylogenetic analyses of the molecular markers (internal transcribed spacer rDNA and translation elongation factor $1{\alpha}$), the fungus was identified as Fusarium oxysporum. Pathogenicity of a representative isolate was demonstrated via artificial inoculation, and it satisfied Koch's postulates. To our knowledge, this is the first report of F. oxysporum causing wilt of zucchini in Korea.

Penicillifer diparietisporus: a New Record from Field Soil in Korea

  • Das, Kallol;Back, Chang-Gi;Lee, Seung-Yeol;Jung, Hee-Young
    • 한국균학회지
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    • 제46권3호
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    • pp.227-233
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    • 2018
  • A fungus was isolated from field soil collected from Daegu, Korea. The colony of the isolated fungus showed short, branched, and light to dark yellow pigments with hyaline, yellowish red to orange brown aerial mycelia. In addition, the fungus produced solitary to aggregated perithecia, ovoid to pyriform, short neck, and asci as well as biseriately arranged ascospores. Phylogenetic analysis using the internal transcribed spacer region and translation elongation factor $1-{\alpha}$ sequences and morphological characteristics identified the isolated fungus as Penicillifer diparietisporus, which belongs to the family Nectriaceae. To our knowledge, this is the first report of Penicillifer diparietisporus in Korea.

First Report of Neopestalotiopsis australis Isolated from Soil in Korea

  • Park, Sangkyu;Lee, Seung-Yeol;Lee, Jae-Jin;Back, Chang-Gi;Ten, Leonid;Lee, Hyang Burm;Jung, Hee-Young
    • 한국균학회지
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    • 제44권4호
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    • pp.360-364
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    • 2016
  • Fungal strain KNU16-005 was isolated from field soil in Jeollabuk-do, Korea. Based on its morphological characteristics and phylogenic analysis using internal transcribed spacer regions of rDNA, ${\beta}$-tubulin and translation elongation factor 1-alpha gene sequences of KNU16-005 were identified as Neopestalotiopsis australis. This species has not been previously reported in Korea.

First Report of Fusarium subglutinans Causing Leaf Spot Disease on Cymbidium Orchids in Korea

  • Han, Kyung-Sook;Park, Jong-Han;Back, Chang-Gi;Park, Mi-Jeong
    • Mycobiology
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    • 제43권3호
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    • pp.343-346
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    • 2015
  • In 2006~2010, leaf spot symptoms, that is, small, yellow spots that turned into dark brown-to-black lesions surrounded by a yellow halo, were observed on Cymbidium spp. in Gongju, Taean, and Gapyeong in Korea. A Fusarium species was continuously isolated from symptomatic leaves; in pathogenicity testing, isolates caused leaf spot symptoms consisting of sunken, dark brown lesions similar to the original ones. The causal pathogen was identified as Fusarium subglutinans based on morphological and translation elongation factor 1-alpha sequence analyses. This is the first report of F. subglutinans as the cause of leaf spot disease in Cymbidium spp. in Korea.

Report on a New Truffle Species, Tuber koreanum sp. nov., from Korea

  • Park, Hyeok;Gwon, Ju-Hui;Lee, Jong-Chul;Eom, Ahn-Heum
    • Mycobiology
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    • 제49권6호
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    • pp.527-533
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    • 2021
  • The truffle and ectomycorrhizal roots formed by Tuber sp. were collected from the rhizosphere of Quercus aliena in Korea. The morphological characteristics of the ascoma, and molecular phylogenetic analysis using sequences from the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA, translation elongation factor 1-alpha (TEF), and RNA polymerase second largest subunit (RPB2) regions confirmed the distinct morphology of the truffle. This truffle belongs to a monophyletic clade among the other Tuber species in the phylogeny. This study describes the truffle, Tuber koreanum, as a new species reported from Korea.

Re-Examination of Several Elsinoë Species Reported from Japan

  • Anysia Hedy Ujat;Tsuyoshi Ono;Yukako Hattori;Chiharu Nakashima
    • Mycobiology
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    • 제51권3호
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    • pp.122-138
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    • 2023
  • Elsinoë are plant pathogenic fungi that cause scabs, spotted anthracnose, and some morphological distortions on various plants, including woody plants, economically important crops, and ornamental plants. Taxonomical reexamination of Elsinoë species in Japan has not yet been conducted based on the modern species criteria. In this study, several Japanese isolates were reexamine based on the morphological and molecular-phylogenetic analysis of the internal transcribed spacer region (ITS), large subunit gene (LSU)m and protein-coding gene such as RNA polymerase II subunit (rpb2) and Translation elongation factor 1-alpha (tef). Japanese isolates were divided into four clades and three new species, Elsinoë hydrangeae, E. sumire, and E. tanashiensis were proposed. One species, Sphaceloma akebiae, was transferred to the genus Elsinoë.

Acrodontium burrowsianum and Pestalotiopsis humicola: Two Previously Unrecorded Fungal Species Isolated from Conifer Leaves in Korea

  • Jae-Wook Choi;Jung-Min Lee;Seok-Yong Park;Ahn-Heum Eom
    • 한국균학회지
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    • 제50권4호
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    • pp.311-318
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    • 2022
  • Endophytic fungal strains were isolated from the leaves of two conifer species (Juniperus rigida and Pinus densiflora) in Korea and identified on the basis of their morphological and molecular characteristics. Internal transcribed spacer and large subunit regions of rDNA were used for the phylogenetic analysis, and the translation elongation factor 1-alpha (TEF) and RNA polymerase II second largest subunit (RPB2) genes were analyzed depending on the species. Two fungal species that were previously unrecorded in Korea were identified: Acrodontium burrowsianum and Pestalotiopsis humicola. Their morphological and phylogenetic characteristics are described herein.

꽃도라지 뿌리썩음병을 일으키는 Fusarium solani 의 특성 (Characterization of Fusarium solani Causing Fusarium Root Rot of Lisianthus in Korea)

  • 최효원;홍성기;이영기;김점순;이재금;김효원;강은혜;이은형
    • 한국균학회지
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    • 제45권1호
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    • pp.74-82
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    • 2017
  • 꽃도라지(Eustoma grandiflorum)는 국내에서 장식용 화훼류로 널리 이용되는 절화류이다. 2015년 경기도 여주와 경남 김해 지역에서 꽃도라지가 시들고, 지제부가 잘록해지면서 위축되고, 뿌리가 썩는 증상이 나타났다. 병든 식물체는 포장이나 육묘상자에서 황화되고, 뿌리 발육이 저해되었고, 진전되면 전체적으로 황화되면서 시들고, 위축되며, 결국 2~3개월 안에 완전히 말라 죽는다. 병든 식물체 지제부에서 Fusarium균이 분리되었고, 9개 균주를 단포자 분리하여 형태적 특성을 조사한 결과, Fusarium solani로 동정되었다. 대형포자는 통통하고, 직선형이거나 약간 굽은 초승달 모양이고, 소형분생포자는 긴mono형태의 분생포자원세포에서 false head상으로 형성되었다. 후벽포자는 균사 중간 혹은 끝부분에 풍부하게 형성되었다. 이와 같은 동정 결과는 translation elongation factor 1 alpha (TEF)와 RNA polymerase II subunit (RPB2) 유전자의 염기서열 분석으로 재확인되었다. 그 결과, 분리 균주는 NCBI GenBank에 등록된 F. solani와 TEF 유전자는 99.2~99.9%, RPB2 유전자는 98.0~98.1%의 상동성을 나타내었다. 건전한 꽃도라지 유묘의 뿌리를 포자현탁액에 침지 접종하여 병원성 검정을 수행한 결과, 접종 7일 이내에 접종한 식물체에서만 병징이 관찰되었다. 따라서 이 병을 F. solani에 의한 꽃도라지 뿌리썩음병으로 명명하며, 병의 발생을 국내에서 처음으로 보고한다.