• 한국균학회지
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• 제47권4호
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• pp.437-441
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• 2019

국화에 발생하는 반쪽시들음병은 Veriticillium dahliae에 의해 발생하는 진균병으로 국화 재배농가에 상당한 경제적 손실을 야기한다. 일반 식물병원균을 동정하는 방법으로는 병원균을 진단하기까지 상당한 시간이 소요된다. 본 연구에서는V. dahliae를 신속하고 특이적으로 진단하기 위하여 등온증폭기술 (Loop-mediated isothermal amplification, LAMP)을 적용한 검출법을 개발하였다. 이 방법은 반쪽시들음병균의 cellulose-growth-specific protein partial mRNA 유전자 염기서열을 이용하여 4개의 특이 프라이머 세트를 제작하였다. 최적 반응조건 및 시간은 60℃ 내외의 온도조건에서 60분 이내에서 가장 효율이 좋은 것으로 나타났다. 이 등온증폭 검출법은 4종의 토양전염성 병원균과 기주식물의 DNA에는 반응하지 않았다. 따라서 반쪽시들음병균 등온증폭법을 활용한다면 병원균의 감염 유무를 조기에 신속하게 진단할 수 있고, 반쪽시들음병을 효율적으로 모니터링하고 방제할 수 있을 것으로 기대한다.

• 한국약용작물학회지
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• 제22권5호
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• pp.391-397
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• 2014

To control the disease of root rot in ginseng nursery, inorganic sulfur solution of 0.1%, 1.0%, and 2.0% were irrigated by amount of $10{\ell}$ per $3.3m^2$ before sowing. On the last ten days of July, Fusarium solani and F. oxysporum were similarly detected by 44.8% and 43.8%, respectively, while Cylindrocarpon destructans was low detected by 4.4% in the diseased seedling. The more sulfur's concentration was increased, the more soil pH was decreased. Soil pH was decreased from 5.87 to 4.59 by the irrigation of sulfur solution of 1.0%. The more sulfur's concentration was increased, the more electrical conductivity (EC) of soil was increased. EC was increased from 0.27 dS/m to 1.28 dS/m by the irrigation of sulfur solution of 1.0%. Irrigation of sulfur solution was effective on the inhibition of damping-off caused by Rhizoctonia solani in ginseng seedling. Control value for damping-off by the irrigation of sulfur solution of 1.0% and 2.0% were 75.7%, and 78.5%, respectively. Growth of leaf was inhibited by the irrigation of sulfur solution of 2.0%. Root weight per $3.3m^2$ showed the peak in sulfur solution of 1.0%, while survived-root ratio and root weight per plant were decreased in the level of 2.0%. Survived-root ratio of seedling in sulfur solution of 1.0% was distinctly increased by 4.7 times compare to the control, but control value for root rot was relatively low as 49.2%. Mycelium growth of C. destructans, F. solani, and R. solani were distinctly inhibited by the increase of sulfur's concentration in vitro culture using PDA medium.

• The Plant Pathology Journal
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• 제27권4호
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• pp.324-332
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• 2011

Soil-borne barley yellow mosaic disease caused by Barley yellow mosaic virus (BaYMV) or Barley mild mosaic virus (BaMMV) gives a serious threat to the winter barley cultivated in the southern regions in Korea. It is important to develop resistant varieties for stable and high-yield production. The objectives of this study were to evaluate 22 genotypes of exotic barley germplasms carrying the resistance genes rym1 through rym12, with the exception of rym10, and to determine the genes that confer resistance to BaYMV or BaMMV in Korea. Using the traditional visual scoring of symptoms at 4 locations over 3 years, average disease rate values differed (P < 0.001) among the genotypes. ELISA test revealed the presence of both BaYMV and BaMMV in all of the field sites but Jinju and significantly different rates of infection among genotypes and years. Barley genotypes differed in how virus quantities and pathogen-induced symptoms were correlated, especially in response to BaYMV. Disease incidence was affected by the climatic conditions present during the early growing stage before overwintering. A Chinese landrace, 'Mokusekko 3', carrying rym1 and rym5 was comparatively resistant at all locations studied. The barley genotypes carrying either rym6 or rym9 were susceptible to the viral strains. The genotypes carrying rym5 were resistant in Jinju and Milyang but susceptible in Iksan and Naju. The resistance genes rym2 and rym3 were effective in local strains and would be potent contributors to disease resistance.

• The Plant Pathology Journal
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• 제19권3호
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• pp.181-183
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• 2003

Corky root symptoms caused by Pyrenochaeta lycopersici were observed on the roots and stem base of tomato plants in Korea. Symptoms on infected plants typically appeared as stunting and generally lacking vigor, and infected plants die back from the foliage tips after fruits have set. Brown lesions appearing with bands around the roots were characteristic symptoms of the disease. The lesions become swollen and cracked along the length of the root with corky appearance. Based on cultural and morphological characteristics, the fungus from the diseased plants was identified as Pyrenochaeta lycopersici. Pycnidia were solitary, globose to subglobose, brown to black, darker around the neck region, and measured 173-215 $\mu\textrm{m}$ in diameter with septate setae up to 102-132$\times$6.5 $\mu\textrm{m}$. Conidia were hyaline, unicellular, and 4.2-4.7$\times$l.5-2.0 $\mu\textrm{m}$ long. Optimum temperature for mycelial growth of the p. lycopersici isolates ranged from $20^{\circ}C$ to $25^{\circ}C$. Fifteen isolates off lycopersici were tested for pathogenicity to susceptible and tolerant cultivars of tomato plants by artificial inoculation. Three isolates of P. lycopersici induced typical corky root discoloration on susceptible tomato cultivars but not on tolerant tomato. This is the Erst report in Korea of tomato corky root disease caused by P. lycopersici.

• 미생물학회지
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• 제36권1호
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• pp.40-45
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• 2000

Rhizoctonia solani 분류를 위해 균사의 anastomosis group과 phylogenetic group간의 유전적 차이의 분석을 위해 AFLP를 실시하였다. 그 결과, 각 집단의 유사도는 크게 5집단으로 나뉘어졌다. 균주 9와 균주 20은 0.777을 나타내며 AG-5 group에 속하였고 균주 6은 균주 24와 0.670으로 AG-3 group에 속하였다. 균주 3은 균주 13과 0.844, 균주 10과 0.833의 높은 상동성을 보이며 AG-2-2 group에 속하였다. 균주 2는 균주 11과 0.744, 균주 3은 균주 13과 0.844, 균주 4는 균주 5와 0.870, 균주 5는 균주 16과 0.833을 나타내며 AG-1 group에 속하였다. 균주 7은 균주 8과 0.837의 높은 상동성을 나타내고, 균주 8은 AG-1( I B)와 0.751를 나타냈고, 균주 1과 균주 7,8은 AG-1( I B)에 속하였다.

• Journal of Ginseng Research
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• 제42권3호
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• pp.304-311
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• 2018

Background: Ginseng black spot disease resulting from Alternaria panax Whuetz is a common soil-borne disease, with an annual incidence rate higher than 20-30%. In this study, the bacterial strains with good antagonistic effect against A. panax are screened. Methods: A total of 285 bacterial strains isolated from ginseng rhizosphere soils were screened using the Kirby-Bauer disk diffusion method and the Oxford cup plate assay. We analyzed the antifungal spectrum of SZ-22 by confronting incubation. To evaluate the efficacy of biocontrol against ginseng black spot and for growth promotion by SZ-22, we performed pot experiments in a plastic greenhouse. Taxonomic position of SZ-22 was identified using morphology, physiological, and biochemical characteristics, 16S ribosomal DNA, and gyrB sequences. Results: SZ-22 (which was identified as Brevundimonas terrae) showed the strongest inhibition rate against A. panax, which showed 83.70% inhibition, and it also provided broad-spectrum antifungal effects. The inhibition efficacies of the SZ-22 bacterial suspension against ginseng black spot reached 82.47% inhibition, which is significantly higher than that of the 25% suspension concentrate azoxystrobin fungicide treatment (p < 0.05). Moreover, the SZ-22 bacterial suspension also caused ginseng plant growth promotion as well as root enhancement. Conclusion: Although the results of the outdoor pot-culture method were influenced by the pathogen inoculum density, the cropping history of the field site, and the weather conditions, B. terrae SZ-22 controlled ginseng black spot and promoted ginseng growth successfully. This study provides resource for the biocontrol of ginseng black spot.

• 한국토양비료학회지
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• 제47권6호
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• pp.437-442
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• 2014

Foodborne illness due to the consumption of contaminated raw strawberries is a continuing food safety concern. This study investigated and evaluated contamination levels of bacteria on strawberries at farms stage to evaluate potential hazards associated with fresh strawberries. A total of 315 samples, 105 samples from 5 sampling sites (A to E) of 21 farms and 210 samples from 1 sampling site of 6 farms, was collected every month for four months and analyzed to enumerate aerobic bacterial counts, Coliforms/E. coli, Bacillus cereus and Staphylococcus aureus. In addition, the prevalence study of five pathogens (S. aureus, E. coli, E. coli O157:H7, Salmonella spp. and Listeria monocytogenes) was performed on each sample. Aerobic bacterial counts ranged from 0.48 to 6.36 Log CFU/g, with the highest bacterial cell counts recorded for D and E sites. Coliforms were detected in 71 samples (22.5%) with a minimum of 0.48 cfu/g and a maximum of more than 4 Log CFU/g. B. cereus was detected in 98 samples (31.1%) among total samples analyzed. S. aureus was detected in 2 samples with a minimum of 0.48 Log CFU/g and a maximum of 1.38 Log CFU/g. E. coli, E. coli O157:H7, Salmonella spp. and L. monocytogenes were not isolated from any of the samples. The microbial contamination levels of strawberries determined in this study may be used as the fundamental data for microbiological risk assessment.

• 한국미생물·생명공학회지
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• 제26권2호
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• pp.122-129
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• 1998

최근 생물방제균으로 주목받고 있는 Enterobacter cloacae의 방제기작이 이 균에 의해 토양내에서 생산된 휘발성 ammonia이며 ammonia의 생산에는urease가 관계한다는 보고를 근거로 하여, 항생물질 생산성 균주로 선발된 우수한 길항균주에 암모니아 생성능, 즉 urease 유전자를 유전적으로 부가함으로써 항진균성 길항물질 생산과 암모니아 생산이 동시에 이루어 질 수 있는 새로운 다기능의 생물방제균을 유전적으로 육종하고자 하였다. 저병해 인삼경작지로부터 식물근부균 Fusarium solani의 생육을 강하게 억제하는 길항세균 한 균주 SH14균주를 분리, 선발하였으며, 분리된 균주를 동정한 결과 Bacillus subtilis이거나 그 근연종으로 추정되었다. 억제기작 실험을 통해 길항균주 B. subtilis SH14에 의해 생산되는 항진균성 길항물질은 외막가수분해효소와 같은 고분자 물질이 아니라 열에 안정한 저분자의 항생물질임을 알 수 있었다. 한편 ammonia 생산을 위한 urease의 유전자는 urease 생산력이 강력한 호알칼리성 Bacillus pasteurii의 urease 생산유전자를 E. coli-Bacillus shuttle vector인 pEB203에 subcloning하였고, 이어서 pGU 366으로 명명된 이 recombinant plasmid를 선발된 항진균성 길항균주 B. subtilis SH14에 PEG-induced protoplast transformation 방법으로 도입, 발현시켰으며, 최적조건을 조사하여 90분간의 lysozyme 처리과정 후 1.5 $\mu\textrm{g}$/$m\ell$의 DNA와 40% PEG4000의 첨가로 약 6.5$\times$$10^{-4}$의 형질전환율을 얻을 수 있었다. 아울러 암모니아 생성능이 부가된 생물방제균 B. subtilis SH14(pGU366)에 의해 식물근부균 F. solani에 대한 생육억제력이 증가되는지 여부를 억제거리 측정법과 균체중량법을 통해 확인한 결과 urease 유전자가 도입된 형질전환체 B. subtilis SH14(pGU366)의 근부균 생육억제능이 각각 36.7%, 44.0%정도로 숙주균주인 B. subtilis SH14에 비해 근부균 생육억제능을 보다 강하게 나타내었음을 알 수 있었다. 따라서 항진균성 항생물질 생산성 생물방제균 B. subtilis SH14에 외부의 urease유전자를 도입하여 ammonia 생성능을 부가함으로써 생물방제력의 상승효과를 거둘 수 있었다.

• 원예과학기술지
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• 제33권4호
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• pp.492-500
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• 2015

본 연구는 한국잔디에 발생하는 주요 병해인 갈색퍼짐병 억제능력을 보인 3가지 길항 미생물의 길항기작과 미생물제제의 개발에 필요한 배양 조건을 밝히는 것이다. 길항미생물들의 길항작용 기작인chitinase, cellulase 및 siderophore생산능 조사에서 선발 길항미생물 모두 chitinase 활성은 없었으나, I-009균주와 FRIN-001-1균주에서 cellulase와 siderophore의 활성이 있어 진균의 외막가수분해 및 경쟁적 길항작용이 있다고 판단하였다. 그러나 YPIN-022균주는 siderophore의 생산능은 확인하였으나, chitinase와 cellulase의 생산능은 없는 것으로 확인되었다. 선발 길항미생물의 실용화를 위해서는 대량 배양이 필수적이므로 배양학적 특징을 탐색하고자 배지, 온도, pH, 배양시간, 탄소원, 질소원, 무기화합물 등의 영향을 조사한 결과 세 균주 모두 LB 배지에서 생육이 가장 왕성하였다. 최적 배양 온도는 I-009와 FRIN-001-1균주는 pH 5-8범위에서 $35^{\circ}C$와 $30^{\circ}C$ 온도로 32시간 및 28시간 배양할 때 각각 균체의 생장이 가장 높았다. Pseudomonas 속의 YPIN-022균주는 $35^{\circ}C$ 배양 온도로 pH 5-9 배지위에서 24시간 배양시킬 때 생육이 가장 높았다. 탄소원으로 1% sucrose, 질소원으로 0.5% 효모추출물, 무기화합물로 0.1% 염화칼륨을 첨가한 배지에서 I-009와 YPIN-022균주의 생육이 가장 좋았으나, FRIN-001-1균주는 탄소원으로 mannitol, 무기화 합물로 인산칼륨 첨가배지에서 생육이 더 양호했다.

• 농업과학연구
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• 제47권3호
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• pp.693-705
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• 2020

Grapes (Vitis spp. L.) are the third most produced fruit in the world. Crown gall disease caused by Agrobacterium vitis forms galls in the stems of the grapevines and reduces the vitality of the fruit trees, resulting in reduced yields. This pathogen has occurred in vineyards worldwide and caused serious economic losses. It is a soil-borne disease, so Agrobacterium vitis can survive for several years in vineyards and is difficult to control. Additionally, since there is no effective chemical control method, the most effective control method is the breeding of resistant varieties. To make the resistant variety, marker-assisted selection (MAS) enables fast breeding with low cost. In this study, we applied a genome-wide association study (GWAS), by combining phenotyping and genotyping-by-sequencing (GBS), for the development of a single nucleotide polymorphism (SNP) marker set related to crown gall disease using 350 grapevine varieties. As a result of the GBS based genotyping analysis, about 58,635 SNPs were obtained. In addition, the phenotypic analysis showed 35.2% resistance, 73% moderate susceptibility and 16.4% highly susceptibility. Moreover, after confirmation, two genes (VvARF4 and VvATL6-like) were shown to be related to crown gall disease based on the results of GWAS analysis, using the phenotypic data, and GBS. High-resolution melting analysis (HRMA) was performed using the Luna^® Universal Probe with real-time PCR to distinguish the melting peaks of the resistant and susceptible varieties. Our data show that these SNP markers are expected to be helpful in evaluating resistance against grapevine crown gall disease and in breeding.