• 제목/요약/키워드: Soil extracts

검색결과 199건 처리시간 0.021초

Purification, Characterization, and cDNA Cloning of Xylanase from Fungus Trichoderma Strain SY

  • Min, Shin-Young;Kim, Bong-Gyu;Lee, Chan;Hur, Hor-Gil;Ahn, Joong-Hoon
    • Journal of Microbiology and Biotechnology
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    • 제12권6호
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    • pp.890-894
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    • 2002
  • A xylanase-producing Trichoderma strain was isolated from soil. Xylanase from Trichoderma strain SY was purified 21-fold to an apparent homogeneity, with a $17.4\%$ yield. The optimum pH and temperature were determined to be 5.5 and $50^{\circ}C$, respectively, and its molecular weight was 21-kDa by SDS-PAGE. The corresponding gene, named xyl, was cloned by RT-PCR. DNA blot analysis of xyl showed that this gene is present as a single copy. The amino acid sequence of the Xyl protein showed similarity to those of other xylanases derived from various fungi. mRNA of xyl was highly expressed when this fungus was grown on cellulose or xylan as a sole carbon source, but undetectable when grown on sucrose. Extracts of Escherichia coli cells expressing xyl were found to have xylanase activity. It was confirmed that xyl from this isolate encodes xylanase.

항생제 다제내성균 Pseudomonas aeruginosa에 대한 생육저해물질 생산 방선균의 분리 및 항균활성 (Isolation and Antibacterial Activity of Actinomycetes Producing Growth Inhibition Compounds Against Multi-antibiotic Resistant Pseudomonas Aeruginosa)

  • 강동희;배호경;김현수
    • KSBB Journal
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    • 제26권1호
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    • pp.19-26
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    • 2011
  • Of the 500 Actinomycetes isolates obtained from soil, one isolate grown on maltose as the sole carbon source produced compound BHK-P19, which inhibited the growth of multiple drug resistant P. aeruginosa 0245. Ultraviolet radiation mutagenesis curtailed production of BHK-P19. Mutation of the BHK-P19 producer using N-methyl-N'-nitro-N-nitroso-guanidine obviated the antibacterial activity to P. aeruginosa 0245, but not towards P. aeruginosa 0225. The mixing of BHK-P19 and BHK-S5 culture extracts inhibited P. aeruginosa 0254, 0225 and 1113. The combined application of BHK-P19 culture extract and Schizandra chinensis Baillon extract inhibited P. aeruginosa 0254, 0225, 0826, 1113, 1378, 1731 and 2492. Use of various concentrations of BHK-P19 culture extract and ampicillin markedly increased antibacterial activity against multi-drug resistant P. aeruginose 1113.

LC-MS/MS Profiling-Based Secondary Metabolite Screening of Myxococcus xanthus

  • Kim, Ji-Young;Choi, Jung-Nam;Kim, Pil;Sok, Dai-Eun;Nam, Soo-Wan;Lee, Choong-Hwan
    • Journal of Microbiology and Biotechnology
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    • 제19권1호
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    • pp.51-54
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    • 2009
  • Myxobacteria, Gram-negative soil bacteria, are a well-known producer of bioactive secondary metabolites. Therefore, this study presents a methodological approach for the high-throughput screening of secondary metabolites from 4 wild-type Myxococcus xanthus strains. First, electrospray ionization mass spectrometry (ESI-MS) was performed using extracellular crude extracts. As a result, 22 metabolite peaks were detected, and the metabolite profiling was then conducted using the m/z value, retention time, and MS/MS fragmentation pattern analyses. Among the peaks, one unknown compound peak was identified as analogous to the myxalamid A, B, and C series. An analysis of the tandem mass spectrometric fragmentation patterns and HR-MS identified myxalamid K as a new compound derived from M. xanthus. In conclusion, LC-MS/MS-based chemical screening of diverse secondary metabolites would appear to be an effective approach for discovering unknown microbial secondary metabolites.

Antifungal Effects of Silver Phytonanoparticles from Yucca shilerifera Against Strawberry Soil-Borne Pathogens: Fusarium solani and Macrophomina phaseolina

  • Ruiz-Romero, Paola;Valdez-Salas, Benjamin;Gonzalez-Mendoza, Daniel;Mendez-Trujillo, Vianey
    • Mycobiology
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    • 제46권1호
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    • pp.47-51
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    • 2018
  • In the present study, the characterization and properties of silver nanoparticles from Yucca shilerifera leaf extract (AgNPs) were investigated using UV-visible spectroscopic techniques, zeta potential, and dynamic light scattering. The UV-visible spectroscopic analysis showed the absorbance peaked at 460 nm, which indicated the synthesis of silver nanoparticles. The experimental results showed silver nanoparticles had Z-average diameter of 729 nm with lower stability (195.1 mV). Additionally, our dates revealed that AgNPs showed broad spectrum antagonism ($p{\leq}.05$) against Fusarium solani (83.05%) and Macrophomina phaseolina (67.05%) when compared to the control after nine days of incubation. Finally, AgNPs from leaf extracts of Y. shilerifera may be used as an agent of biocontrol of microorganism of importance. However, further studies will be needed to fully understand the agronanotechnological potentialities of AgNPs from Yucca schidigera.

플러그묘 취출장치 개발 (Development of a Pick-up Device for Plug-Seedlings)

  • 최원철;김대철;김경욱
    • Journal of Biosystems Engineering
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    • 제26권5호
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    • pp.415-422
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    • 2001
  • A seedling pick-up device for vegetable transplanters was developed and its work performance was evaluated at the laboratory. The pick-up device extracts seedlings from a 200-cell tray of seedlings and transfers them to the place where they are to be transplanted into the soil. The device consists of a path generator, pick-up pins and a pin driver. The path generator is a five-bar mechanism comprised of a fixed link, a driving link, a driven link, a connecting link and a slider. The slider is constrained to move along the driven link and a fixed slot of combined straight-line and circular paths. The connecting link joins the driving link and the slider. When the slider moves along the straight-line path of the slot it takes seedlings out from the cell and transfers them to the transplanting hopper when moving along the circular path. A proto-type of the pick-up device was built and tested under the various operational conditions such as age of seedling, approach direction and penetration depth of pins to the cell, holding method of seedling and extracting velocity. The device extracted 30 seedlings per minute with the maximum success ratio of 97% using the seedlings of 23 days old. Some design details were also discussed and suggested to enhance the performance of the device.

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메탄올만 이용하여 성장하는 Methylobacillus의 분리 및 특성 (A Methylobacillus Isolate Growing Only on Methanol)

  • 김시욱;김병홍;김영민
    • 미생물학회지
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    • 제29권4호
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    • pp.250-257
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    • 1991
  • An obligate methanol-oxidizing bacterium, Methylobacillus sp. strain SK1, which grows only on methanol was isolated from soil. The isolate was nonmotile Gram-negtive rod. It does not have internal membrane system. The colonies were small, whitish-yellow, and smooth. The guanine plus cytosine content of the DNA was 48 mol%. Cellular fatty acids consisted predominantly of large amounts of straight-chain saturated $C_{16:0}$ acid and unsaturated $C_{16:1}$ acid. The major ubiquinone was Q-8, and Q-10 was present as minor component. The cell was obligately aerobic and exhibited catalase, but no oxidase, activity. Poly-.betha.-hydroxybutyrate, endospores, or cysts were not observed. the isolate could grow only on methanol in mineral medium. Growth factors were not required. The isolate was unable to use methane, formaldehyde, formate, methylamine, and several other organic compounds tested as a sole source of carbon and energy. Growth was optimal at 35.deg.C and pH 7.5. It could not grow at 42.deg.C. The doubling time was 1.2h at 30.deg.C when grown with 1.0%(v/v) methanol. The growth was not affected by antibiotics inhibiting cell wall synthesis and carbon monoxide but was completely suppressed by those inhibiting protein synthesis. Methanol was found to be assimilated through the ribulose monophosphate pathway. Cytochromes of b-, c-, and o- types were found. Cell-free extracts contained a phenazine methosulfate-linked methanol dehydrogenase activity, which required ammonium ions as an activator. Cells harvested after the late exponential phase seemed to contain blue protein.ein.

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Antifungal Activities of Streptomyces blastmyceticus Strain 12-6 Against Plant Pathogenic Fungi

  • Kim, Yeon Ju;Kim, Jae-heon;Rho, Jae-Young
    • Mycobiology
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    • 제47권3호
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    • pp.329-334
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    • 2019
  • Streptomyces blastmyceticus strain 12-6 was isolated from a forest soil sample of Cheonan area on the basis of strong antifungal activities against plant pathogenic fungi. Butanol extracts of the cultural filtrates were active against C. acutatum, C. coccodes, C. gloeosporioides, F. oxysporum, and T. roseum. Active fractions were prepared by thin layer chromatography using silica gel plate; 12-6-2 ($R_f$ 0.36), 12-6-3 ($R_f$ 0.44). Scanning electron microscopy showed that the active fractions caused a change in surface texture of fungal spores from smooth surface to wrinkled surface. The lethal effect on the spores of the active fractions varied from 56% to 100%. It was shown that the spores of C. acutatum were more sensitive to the antifungal fractions than the spores of F. oxysporum. Fluorescence staining using TOTO-1 indicated that the antifungal fractions could make the spores more sensitive to the fluorescence dye. Thus, it was suggested that antifungal agents prepared in this study exhibited the antifungal activity by damaging the plasma membrane of both fungal spores and hyphae. Identification of antifungal agents in the active fraction using GC-MS analysis revealed the presence of cyclo-(Leu-Pro) and 9-octadecenamide as major components that have already been known as antifungal substances.

제한통성 메탄올자화세균인 Methylovorus sp. Strain SS1의 분리 및 특성 (Isolation and Characterization of a Restricted Facultatively Methylotrophic Bacterium Methylovorus sp. Strain SS1)

  • 서성아;김영민
    • 미생물학회지
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    • 제31권3호
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    • pp.179-183
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    • 1993
  • A restricted facultatively methanol-oxidizing bacterium, Methylovorus sp. strain SS1, was isolate dfrom soil samples from Kuala Lumpur, Malaysia, through methanol-enrichment culture technique. The isolate was nonmotile Gram-negative rod and did not have complex internal membrane system. The colonies were small, pale-yellow, and raised convex with entire margin. The cell did not produce any spores and capsular materials. The cell was obligately aerobic and exhibited catalase, but no oxidase, activity. Plasmid, carotenoid pigment, and poly-.betha.-hydroxybutyric acid were not found. The guanine plus cytosine content of the DNA was 55%. The isolate was found to grow only on methanol methylamine, or glucose. Growth factors were not required. Cells growing on methanol was found to produce extracellular polysaccharides containing glucose, lactose, and fructose. Growth was optimal (t$_{d}$= 1.7) with 0.5%(v/v) methanol at 40.deg.C and pH 6.5. No Growth was observed at over 60.deg.C. Cell-free extracts of the methanol grown cells exhibited the phenazine methosulfate-linked methanol dehydrogenase activity Methanol was found to be assimilate dthrough the ribulose monophosphate pathway.y.

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Screening of Anti-inflammatory Effect of Halophyte Extracts

  • Jae-Bin Seo;Young-Jae Song;Sa-Haeng Kang;Se-Woong-Ko;Dong-Keun Kim;Tae-Hyun Kim;Jeong-Hyang Park;Ju-Ryun Soh;Jong-Sik Jin
    • 한국자원식물학회:학술대회논문집
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    • 한국자원식물학회 2020년도 추계국제학술대회
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    • pp.79-79
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    • 2020
  • Halophyte is a plant that has evolved to grow well in salty places, and is mainly distributed in coastal wetlands, sand dunes, salt fields, and reclaimed lands in tidal flats and river estuaries. Because it grows in the soil where seawater enters and exits, it is very abound in natural minerals and produces certain metabolites to survive sustainably in the surrounding environment. In this study, anti-inflammatory studies were conducted using 15 kinds of halophyte to secure data on halophytes of infinite value as functional materials. The aim of this study was to select a group of halophytes that regulate iNOS expression, which is involved in the secretion of inflammatory cytokines and nitric oxide production in LPS-induced macrophages. Among the 15 species of halophyte, except for Triglochin maritimum, Suaeda japonica, and Carex pumila, NO production was reduced in 12 species of halophytes, and 7 species of halophyte (Suaeda asparagoides, Artemisia fukudo, Spergularia marina, Aster tripolium, Suaeda australis, Atriplex subcordata, Calystegia soldanella) significantly decreased the expression levels of TNF-α and IL-1β.

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토양이화학성(土壤理化學性)이 지황(地黃)(Rehmannia glutinosa) 근경(根莖)의 Catalpol, 당류(糖類) 및 회분함량(灰分含量)에 미치는 영향(影響) (Effects of Soil Properties on the Contents of Catalpol, Sugars and Ash in the Rhizoma of Rehmannia glutinosa)

  • 박병윤;장상문;최정
    • Applied Biological Chemistry
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    • 제32권3호
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    • pp.240-248
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    • 1989
  • 한방(韓方)의 요약(要藥)인 지황(地黃)의 품질향상(品質向上)을 위한 배재지선정(培栽地選定)의 기초자료(基礎資料)를 얻기 위하여 재배지토양(栽培地土壤)의 이화학성(理化學性)이 지황(地黃)의 품질(品質)을 좌우하는 catalpol, 당류(糖類), 회분(灰分) 및 엑기스들의 함량(含量)에 미치는 영향(影響)을 조사(調査)하였다. 재배지(栽培地)의 토성(土性)은 사질식양토(砂質植壤土) 및 사양토(砂壤土)가 많았다. Catalpol 함량(含量)은 $3.75{\sim}4.36%$의 범위(範圍)에 속(屬)하였다. 표토(表土) 및 심토(心土)의 모래함량(含量)은 catalpol 함량(含量)과는 정(正)의 상관(相關)이, fructose 및 galactose의 함량(含量)과는 부(負)의 상관(相關)이 인정(認定)되었으며 심토(心土)의 모래함량(含量)은 회분(灰分) 및 산불용성회분(酸不溶性灰分)의 함량(含量)과 부(負)의 상관(相關)이 인정(認定)되었다. 심토(心土)의 점토함량(粘土含量)은 catalpol 함량(含量)과 부(負)의 상관(相關)이, fructose, galactose 및 sucrose들의 함량(含量)과는 정(正)의 상관(相關)이 인정(認定)되었다. 표토(表土) 및 심토(心土)의 점토함량(粘土含量)은 회분함량(灰分含量)과 정(正)의 상관(相關)이, 엑기스들의 함량(含量)과는 부(負)의 상관(相關)이 인정(認定)되었다. 토양중(土壤中) 유기함물량(有機含物量)은 catalpol 및 엑기스들의 함량(含量)과 부(負)의 상관(相關)이, fructose 및 회분함량(灰分含量)과는 정(正)의 상관(相關)이 인정(認定)되었다. 토양중(土壤中) 유기함물량(有機含物量)은 catalpol 및 엑기스들의 함량(含量)과 부(負)의 상관(相關)이, fructose 및 회분함량(灰分含量)과는 정(正)의 상관(相關)이 인정(認定)되었다. 토양중(土壤中) 전질소함량(全窒素含量)은 catalpol 함량(含量)과 부(負)의 상관(相關)이, fructose 및 sucrose의 함량(含量)과는 정(正)의 상관(相關)이 인정(認定)되었다. 토양중(土壤中) 가리함량(加里含量)은 fructose의 함량(含量)과 고도(高度)의 정(正)의 상관(相關)이 인정(認定)되었다.

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