• Title/Summary/Keyword: Soil bacterial population

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The fluctuation of soil pathogenic microbes population in radish and chinese cabbage fields (무우 배추 포장내의 병원성 토양미생물 소장)

  • 이왕휴;소인영
    • Korean Journal of Microbiology
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    • v.21 no.1
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    • pp.7-14
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    • 1983
  • In order to study the effects of cropping system and fungicide (Dachigaren) on soil microbes, the seasonal fluctuations of soil microbes in the fields of radish and Chinese cabbage including soil pH, Soil moisture content and soil temperature were investigated on every 15 day interval from the begining of March to late October in 1981. The population of total fungus peaked at the begining of July, while that of total bacteria, at the begining of August. They were affected by soil temperature, however pathogenic microbes seemed to be more related with host plants than the soil temperature, because pathogens showed high density through the whole cultivation period. The pathogenic microbes showed the density of order ; Xanthomonas, Erwinia, Pseudomonas, Agrobacterium and Corynebacterium. Xanthomonas, Erwinia and Pseudomonas, which induced radish and Chinese cabbage diseases were higher than Agrobacterium and Corynebacterium in population densigy. Bacterial soft rot occured at the density of Erwinia $5.9{\sim}6.6{\times}10^5/dry$ soil 1 gram. The density of microbes on continuous fields were higher than that of rotating fields, but there were no significant difference between treated fungicide plot and non treated in the density of microbes, also no difference between Chinese cabbage and radish growing fields.

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Effect of Soil Environment on Diversity and Population of Aerobic Soil Bacteria from Baekdudaegan Mountain Forests in Gyeongsangbuk-do, Korea (경상북도 산림지역의 토양 환경이 호기성 토양 세균의 다양성과 밀도에 미치는 영향)

  • Park, Chul Yeong;Lee, Sun Keun;Kim, Ji Hong;Lee, Sang Yong;Lee, Jong Kyu
    • Journal of Korean Society of Forest Science
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    • v.101 no.3
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    • pp.501-508
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    • 2012
  • This study was carried out to compare species diversity of soil bacteria from Baekdudaegan mountain forests (Bonghwa-gun, Mungyeong-si and Sangju-si) in Gyeongsangbuk-do and to analyze the effects of soil environments on diversity and population of soil bacteria. Soil bacteria were isolated from soil samples by streak plate method, and identified by DNA extaction and 16S rDNA sequence analyses. The population of soil bacteria from the soil samples of Bonghwa-gun was the highest with $5.1{\times}10^5cfu/g$, and followed by those from Mungyeong-si and Sangju-si with $1.9{\times}10^5cfu/g$ and $1.1{\times}10^5cfu/g$, respectively. The population of soil bacteria from surface layer soil was the highest, and then gradually decreased according to soil depth. The increase in population of soil bacteria from soil samples of different sites was correlated with the increase of the altitude of soil sampling site, depth of A horizon, liquid phase among three phases of soil, water content and bulk density of soil. Two hundreds and sixty eight bacterial colonies from Bonghwa-gun were classified into 10 species, 8 genera. One hundred and thirty four bacterial colonies from Mungyeong-si were classified into 15 species, 9 genera. Forty four bacterial colonies from Sangju-si were classified into 5 species, 2 genera. The dominant species (occupancy rate) from Bonghwa-gun and Mungyeong-si were Bacillus weihenstephanensis (36% and 40%, respectively), and Sangju-si was Bacillus cereus (39%). The relationships between soil environment and community structure of soil bacteria were analyzed statistically by using ecological indices. The diversity, evenness and dominance indices of soil bacteria were 6.30, 2.04 and 0.59 in Bonghwa-gun, 9.09, 2.94 and 0.51 in Mungyeong-si, and 4.55, 2.34 and 0.71 in Sangju-si, respectively. The diversity and evenness indices were increased by the increase of water content, drainage condition and gravel content of soil, while the dominance index was decreased.

Assessment of Soil Microbial Communities in Carotenoid-Biofortified Rice Ecosystem

  • Sohn, Soo-In;Oh, Young-Ju;Kim, Byung-Yong;Lee, Bumkyu;Lee, Si-Myung;Oh, Sung-Dug;Lee, Gang-Seob;Yun, Doh-Won;Cho, Hyun-Suk
    • Korean Journal of Soil Science and Fertilizer
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    • v.48 no.5
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    • pp.442-450
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    • 2015
  • This study was conducted to investigate the effect of Psy-2A-CrtI (PAC), a genetically modified (GM) rice with enhanced ${\beta}$-carotene, on the soil microbial community. The soil used to cultivate GM rice and its wild-type, Nakdong, was analyzed for population density, denaturing gradient gel electrophoresis (DGGE), and pyrosequencing. It was found that the bacterial, fungal and actinomycetes population densities of the PAC soils were within the range of those of the non-GM rice cultivar, Nakdong. The DGGE banding patterns of the GM and non-GM soils were also similar, suggesting that the bacterial community structures were stable within a given month and were unaffected by the presence of a GM plant. The pyrosequencing result showed a temporal difference in microorganism taxon and distribution ratio, but no significant difference between GM and non-GM was found. The persistence of the transgene DNA in the plant and surrounding soil were investigated for different time periods. There were differences in the persistence within the plant depending on the gene, but they could not be detected after 5 weeks. Also the transgenes were not detected in the surrounding soil. These results indicate that soil microbial communities are unaffected by the cultivation of a PAC rice within the experimental time frame.

Studies on the Root Rot of Ginseng(VII) (인삼근부병에 관한 연구. VII)

  • 이민웅
    • Korean Journal of Microbiology
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    • v.15 no.1
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    • pp.20-30
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    • 1977
  • Relationship of soil properties and seasonal variation on microbilogical population to-continuous culture and first-time culture of ginseng was investigated by bimonthly from May 1976 to January 1977. pH and P contents of 2 years continuous culture of soil were higher than other culture plot of soil, and contraty to the above, 2 years first-time culture of ginseng soil was conplot of soil, and contraty to the above, 2 years first-time culture of ginseng soil was contained more potassium contents than other culture plot of soil. In microbiological fluctuation with seasonr in various soil conditions, the population, trends of Fusarium spp., Erwiniaspp., and flourescent Psedudomonas spp. were increased in May and July in general, but decreased in the other month. It was observed that in all type of soil, Fusarium spp. was distributed in abundance in and on rihizosphere, and decreased the propagules numbers as soil depth increase. The numbers of Erwinia spp. and fluorescent Pseudo-monas spp. were distributed greater in numbers on the surface zone of soil depth decreasing the numbers along the soil layer increase, and also in 2years continuous culture of soil especially, a great numbers of Erwinia spp. and fluorescent Pseudomonas were evenly distributed in surface zone and rhizosphere. Ginseng disease with a high incidence of bacterial disease in continuous culture of 2 and 4 years was seemed to be associated with soil bacteria that was high in numbers of Erwinia spp. and fluorescent Pseudomonas spp. in May and July.

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Influence of Soil Microbial Biomass on Growth and Biocontrol Efficac of Trichoderma harzianum

  • Bae, Yeoung-Seuk;Guy R. Kundsen;Louise-Marie C. Dandurand
    • The Plant Pathology Journal
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    • v.18 no.1
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    • pp.30-35
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    • 2002
  • The hyphal growth and biocontrol efficacy of Trichodemo harzianum in soil may depend on its interactions with biotic components of the soil environment. The effect of soil microbial biomass on growth and biocontrol efficacy of T. hanianum isolate ThzIDl-M3 (green fluorescent protein transformant) was investigated using artificially prepared different levels of soil microbial biomass (153,328, or 517ug biomass carbon per g of dry soil; BC). The hyphal growth of T. harzanum was significantly inhibited in the soil with 328 or 517 $\mu$g BC compared with 153 ug BC. When ThzIDl-M3 was added to the soils as an alginate pellet formulation, the recoverable population of ThzIDl-M3 varied, but the highest population occurred in 517ug BC. Addition of alginate pellets of ThzIDl-M3 to the soils (10 per 50 g) resulted in increased indigenous microbial populations (total fungi, bacterial fluorescent Pseudomonas app., and actinomycetes). Furthermore, colonizing ability of ThzIDl-M3 on sclerotia of Sclerotinia sclerotiorum was significantly reduced in the soil with high revel of BC. These results suggest that increased soil microbial biomass contributes to increased interactions between introduced T. harzianum and soil microorganisms, consequently reducing the biocontrol efficacy of 1T. harzianum.

Spatial Distribution of Pasteuria nishizawae Attacking Heterodera glycines (콩씨스트선충 기생세균 Pasteuria nishizawae의 토양내 분포)

  • 김동근;이영기;이재국
    • Korean Journal Plant Pathology
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    • v.14 no.6
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    • pp.710-713
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    • 1998
  • Spatial distribution in soil and seasonal population changes of Pasteuria nishizawae first found in Korea from soybean cyst nematode were studied. P. nishizawae infested in 61% of areas in a soybean field; in an average, about 0.3% of 46 cysts and 17.6% of 9 juveniles per 100 g soil were infested with the bacterium. The highest percentages of spore-attached nematodes were found in July (75%) and between soil depth of 11~20 cm. The number of spores per juvenile was positively correlated with the percentage of juveniles with spores (r=0.4203; P<0.0133), but negatively correlated with the number of juveniles in soil (r=-0.3499; P<0.042). P. nishizawae completed its life cycle in cyst and produced 1.7$\times$105 spores per cyst.

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Effect of Electrolysis on Bacterial Activity in Electrokinetic Bioremediation (동전기 생물학적 복원에서 전기분해반응이 미생물 활성에 미치는 영향)

  • Kim, Sang-Joon;Park, Ji-Yeon;Lee, You-Jin;Yang, Ji-Won
    • Journal of Korean Society of Environmental Engineers
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    • v.28 no.7
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    • pp.764-769
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    • 2006
  • In the electrokinetic(EK) process, oxygen production by electrolysis was proportional to current density. The dissolved oxygen (DO) concentration in anode tank and bioreactor increased with the circulation rate of electrolyte. The bacterial population in bioreactor rapidly increased by the supplement of current, but the DO concentration deceased by the increased bacterial oxygen consumption. From the results of EK bioremediation for pentadecane-contaminated soil, the bacterial population and removal efficiency at 1.88 $mA/cm^2$ were lower than those at 0.63 $mA/cm^2$. This is because the high oxygen production rate largely increased the production rate of organic acids, which reduced the electrolyte pH and bacterial activity. At 0.63 $mA/cm^2$, the highest bacterial population and removal efficiency could be obtained due to the appropriate oxygen production and small decrease in pH.

Distribution and Properties of Microorganisms in Soil of Representative Vegetation of Mt. Nam (남산 주요 식생의 토양 미생물의 분포 및 생리적 특성)

  • 성치남;백근식;김종홍;전영문;김정근
    • The Korean Journal of Ecology
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    • v.21 no.5_3
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    • pp.703-712
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    • 1998
  • Physicochemical factors, microbial population size and the properties of the bacterial isolates were estimated to find out the nature of soil ecosystem of Mt. Nam. Samples were obtained from the surface layer of soils on which specific plant community is developed. Average content of moisture and organic matter of the soils were 21.6% and 17.3%, respectively. These values were similar to those of developing forest soils, but were slightly lower than those of climax ecosystem such as Piagol in Mt. Chiri. Chiri. Content of phosphate was higher than those of other forest soils. The population size of soil bacteria ranged from 27.4 to 195.8 ${\times}\;10^5$ CFU/g. duy soil, and the size is somewhat dependent on the moisture and oranic matter content of soils. A large number of bacteria were able to decompose macromolecules such as starch, elastin and gelatin. Bacterial species composition of each soil was comparatively simple. Pseudomonas, Agrobacterium, Flavobacterium and Xanthomonas which are Gram-negative short rods were widely distributed in the forest soils. The endospore forming Bacillus species were also the main constituents of the soil microflroa. Actinomycetes were widely distributed in the forest soils, but the distribution pattern varied in each site. Most of the actinomycetes were also able to decompose organic macromolecules. The rate of resistant actinomycete strains to antibiotics and heavy metals were lower than those from cultivated soils, but higher than those from well-preserved forest soils. Antibiosis pattern of the actinomycete isolates was similiar to the resistance pattern. This means the forest soils of Mt. nam was somewhat interferred by artificial behabiour.

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Long-term Composting and Fertilization Impact on Dehydrogenase-producing Bacteria and Dehydrogenase Activity in Rice Paddy Soil (동일비료 장기연용 논토양의 탈수소효소 생성균과 효소활성)

  • Suh, Jang-Sun;Kim, Su-Jung;Noh, Hyung-Jun;Kwon, Jang-Sik;Jung, Won-Kyo
    • Korean Journal of Soil Science and Fertilizer
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    • v.40 no.4
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    • pp.229-233
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    • 2007
  • A long-term rice paddy field, which is located in the National Institute of Crop Science (Suwon city, Korea) has been managed for studying of fertilization and composting impact on paddy soil fertility since 1954. The objective of this research was to evaluate soil quality through dehydrogenase analysis in long-term paddy soil treatment plots, such as control, N fertilization (N), NPK fertilization (NPK), and rice straw compost with NPK (CNPK). Dehydrogenase-producing bacterial population developing red-colored triphenyl formazan (TPF) was highly correlated to the dehydrogenase activity in rice paddy soils sampled prior to waterlog. The dehydrogenase-producing bacterial population and dehydrogenase activity was comparatively high in plots of NPK, and CNPK, which organic matter content was relatively high.