• Title/Summary/Keyword: Soil bacteria

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Effects of Heavy Metals on Biomonitoring using Recombinant Bioluminescence Bacteria (유전자재조합균주를 이용한 생물모니터링에 중금속 오염물이 미치는 영향 평가)

  • Kong, In Chul;Kim, Jin Young;Ko, Kyung-Seok
    • Journal of Soil and Groundwater Environment
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    • v.18 no.4
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    • pp.32-39
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    • 2013
  • This research focused on the effects of heavy metals on the biomonitoring activity of genetically engineered bioluminescent bacteria, Pseudomonas putida mt-2 KG1206. KG1206 was exposed to single or binary mixtures of different heavy metals as well as soils contaminated with heavy metals. In case of single exposure with different inducer pollutant, the toxicity order was as followings : As(III) > Cd, As(V) >> Cu, Cr(VI). The toxic effects of the binary mixtures was compared to the expected effect based on a simple theory of probabilities. The interactive effects were mostly additive, while in few cases antgonistic and synergistic mode of action was observed for some concentration combinations. No considerable correlation was found between the total metal contents in soils and the bioluminescence activity of each sample. However, statistically significant differences (p = 0.0102) were observed between two groups, classified based on arsenite contamination. These results demonstrate the usage of recombinant bioluminescent microorganism in biomonitoring and the complex interactive effects of metals.

Diversity and specificity of soil microorganism isolated from termite nest (흰개미 서식처의 미생물 다양성 및 특이성)

  • Hong, Jin Young;Kim, Young Hee;Jo, Chang Wook;Kim, Sao Ji;Lee, Jeung Min;Jeong, So Young
    • 보존과학연구
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    • s.37
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    • pp.5-15
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    • 2016
  • We isolated microorganisms from soil arounding the stump and surface of stump in Bubjusa temple in Boeun, Heungguksa temple in Yeosu and Leeyongwoo house in Boseong. As a result, a distribution percentage of bacteria was high and there was a region-specific difference in bacteria colony. There was greater microbial diversity and population in the Leeyongwoo house in Boseong.

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A Study of PAH (polyaromatic hydrocarbon) Biodegradation in Soil by Bacillus subtilis mixed with Wooden Media (목재재질의 담체를 혼합한 토양에서 Bacillus subtilis에 의한 PAH분해에 대한 연구)

  • Kwon, Sung-Hyun;Yoo, Seung-Hye;Cho, Dae-Chul;Huh, Nam-Soo;Kim, Jong-Hyang
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.6 no.3
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    • pp.255-260
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    • 2005
  • PAHs are aromatic hydrocarbon compunds with two or more benzene rings. Because they are mostly toxic to human life, they need to be converted to non-toxic compunds or to be degraded completely. This work aims to degrade PAHs (phenanthrene and pyrene) using Bacillus bacteria covered on cork or sawdust. The results show that media effect on phenanthrene was negligible whereas biodegradation ability of sawdust carrying the bacteria was better than that of biofilm-covered cork when pyrene was tested. PAH removal was also affected by soil moisture content with $45\~55\%$ of the optimal content.

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Effects of Pb, Cu, and Cr on Anaerobic Biodegradation of Diesel Compounds by Indigenous Bacteria (혐기성 토착미생물의 디젤 생분해에 대한 Pb, Cu, Cr의 영향)

  • Yoo, Chae-won;Lim, Hyeong-Seok;Park, Jae-woo
    • Journal of Soil and Groundwater Environment
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    • v.20 no.4
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    • pp.15-21
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    • 2015
  • Anaerobic biodegradation of diesel with coexisting heavy metals (Pb) was monitored in batch mode. Two different groups of the indigenous bacteria from a site contaminated with diesel and lead were used in this research: the first group was composed of a single species and the second group was composed of several species. The effect of heavy metals on the microbial population was monitored and confirmed the biodegradation mechanism in each combined contaminant. Growth of the microorganisms in 21 days was observed Diesel > Diesel + Pb > Diesel + Cu > Diesel + Pb + Cu > Diesel + Cr > Diesel + Pb + Cr. Indigenous microorganisms showed the adaptation in the Pb contaminate. Interactive toxic effect using AMES test observed larger synergistic effect than antagonistic in Diesel + Cr and Diesel + Pb + Cr. Therefore, the main effects of diesel biodegradation in the present of heavy metals are likely to exist other factors as well as toxic of heavy metals. This is a necessary part of the future studies.

A Study on the Performance Appraisal for Copper Sheet as Root Barrier Material Appling to Green Roof System (옥상녹화 및 인공지반녹화용 구리시트 방근재의 성능평가에 관한 연구)

  • Cho, Il-Kyu;Kwon, Shi-Won;Kwak, Kyu-Sung;Oh, Sang-Keun
    • Proceedings of the Korean Institute of Building Construction Conference
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    • 2007.04a
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    • pp.5-8
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    • 2007
  • Selection of proper root barrier as destination part of greening is very important in Root penetration resistance plan. To select proper root barrier, it need to understand composition of greening part, size, kind of plant, connection with waterproofing layer. In this point of view, we have establish greening on the roof or concrete structure, not been understand the structural mechanism. It means that we misunderstood about purpose of greening and using it. So, chosen materials and construction method was not proper for greening, it caused water leakage and decrease performance of concrete structure. Therefore, we examine the practical use of copper sheet considering environmental condition for green roof. Watertightness by water of greening part, root penetration resistance test by root penetration, bacteria resistance by must or bacteria in soil, chemical resistance by rain and chemical agent of fertilizer, and load resistance by soil depth, sire of plant. These suggested test methods could be referred as guideline to test in green roof system because of not exist any performance appraisal guideline or standard. Consequently, it should be analysis as technical and institutional subdividing test methods and it need to study constantly as varied angles.

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Antagonistic Evaluation of Chromobacterium sp. JH7 for Biological Control of Ginseng Root Rot Caused by Cylindrocarpon destructans

  • Han, Joon-Hee;Park, Gi-Chang;Kim, Kyoung Su
    • Mycobiology
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    • v.45 no.4
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    • pp.370-378
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    • 2017
  • Cylindrocarpon destructans is an ascomycete soil-borne pathogen that causes ginseng root rot. To identify effective biocontrol agents, we isolated several bacteria from ginseng cultivation soil and evaluated their antifungal activity. Among the isolated bacteria, one isolate (named JH7) was selected for its high antibiotic activity and was further examined for antagonism against fungal pathogens. Strain JH7 was identified as a Chromobacterium sp. using phylogenetic analysis based on 16S rRNA gene sequences. This strain was shown to produce antimicrobial molecules, including chitinases and proteases, but not cellulases. Additionally, the ability of JH7 to produce siderophore and solubilize insoluble phosphate supports its antagonistic and beneficial traits for plant growth. The JH7 strain suppressed the conidiation, conidial germination, and chlamydospore formation of C. destructans. Furthermore, the JH7 strain inhibited other plant pathogenic fungi. Thus, it provides a basis for developing a biocontrol agent for ginseng cultivation.

Screening of Rhizobacteria for Biological Control of Cucumber Root and Crown Rot Caused by Phytophthora drechsleri

  • Maleki, Mojdeh;Mokhtarnejad, Lachin;Mostafaee, Somayyeh
    • The Plant Pathology Journal
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    • v.27 no.1
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    • pp.78-84
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    • 2011
  • Antagonistic rhizobacteria, more specifically fluorescent pseudomonads and certain species of Bacillus, are known as biocontrol agents of fungal root diseases of agronomic crops. In this study, 144 bacteria were isolated from cucumber rhizosphere and screened as potential biological control agents against Phytophthora drechsleri, the causal agent of cucumber root rot, in vitro condition. Non-volatile compounds of 23 isolates showed noticeable inhibition zone (> 30%) against P. drechsleri, whereas volatile compounds of 7 isolates could prevent more than 30% of the mycelial growth of the fungus. All promising isolates, except of Pseudomonas flourescens V69, promoted significantly plant growth under in vitro condition. P. flourescens CV69 and V11 exhibited the highest colonization on the root. Results of the greenhouse studies showed that a reduction in disease incidence by use of some strains, and particularly use of strains CV6 and V11 as a soil treatment, exhibited a reduction in disease incidence so that suppressed disease by 85.71 and 69.39% respectively. Pseudomonas flourescens CV6 significantly suppressed disease in comparison to Ridomil fungicide. The use of mixture bacterial strains in the soil inoculated by the fungus resulting in falling down the most of the plants which didn't show significant difference with infected control soils without bacteria.

Quantification and Evaluation of Groundwater Quality Grade by Using Statistical Approaches (통계적 분석 방법을 이용한 국가지하수수질측정망의 오염 등급 정량화 및 평가)

  • Yoon, Hee-Sung;Bae, Gwang-Ok;Lee, Kang-Kun
    • Journal of Soil and Groundwater Environment
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    • v.17 no.1
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    • pp.22-32
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    • 2012
  • This study suggests a method to grade groundwater quality quantitatively using statistical approaches for evaluating the quality of groundwater in wells included in the Groundwater Quality Monitoring Network (GQMN). The proposed analysis method is applied to GQMN data from 2001 to 2008 for nitrate nitrogen, chloride, trichloroethylene, potential of hydrogen (pH), and electrical conductivity. The analysis results are obtained as groundwater quality grades of the groundwater representing each of the monitoring stations. The degree of groundwater contamination is analysed for water quality parameters, district, and usage. The results show that the degree of groundwater contamination is relatively high by nitrate nitrogen, bacteria and electrical conductivity and at Seoul, Incheon, Gwangju, Gyeonggido and Jeollado. The degree of contamination by nitrate nitrogen and trichloroethylene is especially high when the groundwater is used for agricultural and industrial water, respectively. It is evaluated that potable groudnwater in GQMN is significantly vulnerable to nitrate nitrogen and bacteria contamination.

Distribution Map of Microbial Diversity in Agricultural land (농경지 토양미생물 분포도)

  • Suh, Jang-Sun;Noh, Hyung-Jun;Kwon, Jang-Sik;Weon, Hang-Yeon;Hong, Suk-Young
    • Korean Journal of Soil Science and Fertilizer
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    • v.43 no.6
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    • pp.995-1001
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    • 2010
  • Biogeography is the study of the distribution of biodiversity over space and time. We report the development of a prototype database that maps of microbial diversity in the context of the geochemical and geological environment and geographic location. It aims to reveal where organisms live, and at what abundance in nation wide. Microbial data collected from agricultural land during 1999 to 2007 were categorized for mapping with ArcGIS program. Distribution maps of bacteria, fungi, Bacillus and gram negative bacteria of agricultural land showed different patterns from each other. Microbial biomass content investigated in year of 2007 was higher than in 1999.

Practical significance of plant growth-promoting rhizobacteria in sustainable agriculture: a review

  • Subhashini Wijeysingha;Buddhi C. Walpola;Yun-Gu Kang;Min-Ho Yoon;Taek-Keun Oh
    • Korean Journal of Agricultural Science
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    • v.50 no.4
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    • pp.759-771
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    • 2023
  • Plant growth-promoting rhizobacteria (PGPR) are naturally occurring bacteria that intensively colonize plant roots and are crucial in promoting the crop growth. These beneficial microorganisms have garnered considerable attention as potential bio-inoculants for sustainable agriculture. PGPR directly interacts with plants by providing essential nutrients through nitrogen fixation and phosphate solubilization and accelerating the accessibility of other trace elements such as Cu, Zn, and Fe. Additionally, they produce plant growth-promoting phytohormones, such as indole acetic acids (IAA), indole butyric acids (IBA), gibberellins, and cytokinins.PGPR interacts with plants indirectly by protecting them from diseases and infections by producing antibiotics, siderophores, hydrogen cyanide, and fungal cell wall-degrading enzymes such as glucanases, chitinases, and proteases. Furthermore, PGPR protects plants against abiotic stresses such as drought and salinity by producing 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase and modulating plant stress markers. Bacteria belonging to genera such as Bacillus, Pseudomonas, Burkholderia, Pantoa, and Enterobacter exhibit multiple plant growth-promoting traits, that can enhance plant growth directly, indirectly, or through synergetic effects. This comprehensive review emphasizes how PGPR influences plant growth promotion and presents promising prospects for its application in sustainable agriculture.