• Title/Summary/Keyword: Soil bacteria

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The Effects of Biological Control using the Composted Liquid Manure on Large Patch in Zoysiagrass (Zoysia japonica)

  • Ryu, Ju Hyun;Shim, Gyu Yul;Lee, Sang-Kook;Kim, Ki Sun
    • Weed & Turfgrass Science
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    • v.3 no.4
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    • pp.354-361
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    • 2014
  • This study was conducted to investigate whether several composted liquid manures (CLMs) are useful for biological control of large patch on zoysiagrass and investigate the chemical and biological factors to suppress large patch in soil treated with CLMs. The CLMs were produced at 4 different facilities for livestock excretion treatments located in Korea. Field experiments were carried out at 5 golf courses located near each facility. CLM and Chemical fertilizer (CF: water soluble fertilizer, 20-20-20) were applied four and three times with N at $12g\;m^{-2}$ per year, respectively. There was significant increase of concentration of K, Na, and Cu of soil treated with CLM compared to CF treatment. Among experimental plots, CN and GG2 plot sites were shown significant higher effect of biological control 80% and 50% respectively against large patch disease. The number of bacteria, Actinomycetes, and fungi in soil at these sites significantly increased and fluorescein diacetate hydrolytic activity was enhanced, while the soil was treated with CLM. The results of this study demonstrated that CLM application has effect on soil to suppress large patch and reduce the use of fungicide in environment-friendly turf management.

The Relationship between Microbial Characteristics and Glomalin Concentrations of Controlled Horticultural Soils in Gyeongnam Province

  • Kim, Min Keun;Ok, Yong Sik;Heo, Jae-Young;Choi, Si-Lim;Lee, Sang-Dae;Shin, Hyun-Yul;Kim, Je-Hong;Kim, Hye Ran;Lee, Young Han
    • Korean Journal of Soil Science and Fertilizer
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    • v.47 no.2
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    • pp.107-112
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    • 2014
  • Glomalin has been suggested as an enhancer for soil stability by promoting the aggregation. In this study, we examined the concentrations of glomalin and microbial characteristics in 25 controlled horticultural soils sampled from Gyeongnam Province. Total glomalin had a significant positive correlation with soil organic matter (p < 0.01), soil microbial biomass carbon (p < 0.05), and dehydrogenase activity (p < 0.05) in controlled horticultural soils. In addition, the total glomalin had a significant positive correlation with concentrations of total fatty acid methyl esters, Gram-negative and Gram-positive bacteria, fungi, and arbuscular mycorrhizal fungi in controlled horticultural soils (p < 0.001). In conclusion, the concentration of total glomalin could be an indicator of microbial biomass richness for sustainable agriculture in controlled horticultural soils.

Development of Hybrid Remediation Method for Contaminated Soils with Zinc or Arsenic and Diesel (아연 또는 비소와 경유로 오염된 토양의 복합정화공법 개발)

  • Kim, Hye-Young;Park, Jeong-Hun
    • Journal of Soil and Groundwater Environment
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    • v.15 no.4
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    • pp.13-20
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    • 2010
  • The purpose of this study was to develope the remediation method of contaminated soils with metals and petroleum. The diesel degrading strain was isolated and identified from the soil contaminated by petroleum at industrial sites. Diesel biodegradation experiment was performed by diesel degrading bacteria in both solution and soil slurry. Contaminated soils by Zn or As and diesel were treated consecutively by steam-vapor extraction, biodegradation, and acid washing. The strain was identified as Pseudomonas aeruginosa, and named as Pseudomonas aeruginosa TPH1. The optimal culture conditions of TPH1 were $20^{\circ}C$ and pH 7.0, 3% of diesel concentration. Biodegradation of diesel was performed using the separated strain in liquid medium, and 63% of diesel was degraded in 72 hours. And 52% of diesel was removed in the tested soils. In the treatment of contaminated soils with diesel and Zn or As, 29% ~ 44% of diesel was reduced by steamvapor extraction, 60% ~ 71% of diesel was removed after biodegradation. 47% of Zn and 96% of As were removed after acid(mixture of sulfuric and oxalic acids) washing. It is recommended that consecutive treatment method of steam-vapor extraction, biodegradation and acid washing is effective for remediation of complex contaminated soils with metals and petroleum.

A Field Study on the Evaluation of Slurping and Bioaugmentation Effect in Petroleum Contaminated Area (유류오염지역 정화를 위한 슬러핑과 미생물증진법의 효율평가에 관한 현장 적용성 연구)

  • Park, Eung-Ryeol;Lee, Kwang-Ryeol;Seo, Chang-Il;Cho, Chang-Hwan
    • Journal of Soil and Groundwater Environment
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    • v.17 no.3
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    • pp.32-38
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    • 2012
  • This study was conducted to evaluate the slurping process affecting the variation of free product and VOCs concentration and the bioaugmentation effect on bioremediation process. Free products and soil gas were extracted from 30 extraction wells installed in a petroleum contaminated area. The extraction system was operated for 10 hours per day with 1 hour on-and-off mode. The thickness of free product in extraction well was decreased from 11.7 cm to 4.5 cm and the VOCs concentration was increased from 10.37 ppm to 30.78 ppm during the operation period. After the slurping process for 2 months, contaminated soil was treated with bioremediation process in 2 cells, $15{\times}40$ m, biologically enhanced with adjusting oxygen, moisture and nutrients concentration. Total 1,400 L of microbial inoculant, Naturesys. (Dong Myung Ent. Co.) was added to the pile B, which has an outstanding ability for degrading petroleum hydrocarbons. The results showed that bioremediaton effect in soil with the microorganisms solution is 33% higher than that in soil with only residual bacteria.

Antimicrobial active clones from soil metagenomic library

  • H. K. Lim;Lee, E. H;Kim, J.C.;Park, G. J.;K S. Jang;Park, Y. H.;K Y. Cho;S, W. Lee
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.108.1-108
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    • 2003
  • Soil metagenome is untapped total microbial genome including that of the majority of unculturable bacteria present in soil. We constructed soil metagenomic library in Escherichia coli using DNA directly extracted from two different soils, pine tree rhizosphere soil and forest topsoil. Metagenomic libraries constructed from pine tree rhizosphere soil and forest topsoil consisted of approximately 33,700 clones and 112,000 clones with average insert DNA size of 35-kb, respectively. Subsequently, we screened the libraries to select clones with antimicrobial activities against Saccharomyces cerevisiae and Agrobacterium tumefaciens using double agar layer method. So far, we have a clone active against S. cerevisiae and a clone active against A. tumefaciens from the forest topsoil library. In vitro mutagenesis and DNA sequence analysis of the antifungal clone revealed the genes involved in the biosynthesis of antimicrobial secondary metabolite. Metagenomic libraries constructed in this study would be subject to search for diverse genetic resources related with useful microbial products.

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Growth Promoting Rhizospheric and Endophytic Bacteria from Curcuma longa L. as Biocontrol Agents against Rhizome Rot and Leaf Blight Diseases

  • Vinayarani, G.;Prakash, H.S.
    • The Plant Pathology Journal
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    • v.34 no.3
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    • pp.218-235
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    • 2018
  • Plant growth promoting rhizobacteria and endophytic bacteria were isolated from different varieties of turmeric (Curcuma longa L.) from South India. Totally 50 strains representing, 30 PGPR and 20 endophytic bacteria were identified based on biochemical assays and 16S rDNA sequence analysis. The isolates were screened for antagonistic activity against Pythium aphanidermatum (Edson) Fitzp., and Rhizoctonia solani Kuhn., causing rhizome rot and leaf blight diseases in turmeric, by dual culture and liquid culture assays. Results revealed that only five isolates of PGPR and four endophytic bacteria showed more than 70% suppression of test pathogens in both assays. The SEM studies of interaction zone showed significant ultrastructural changes of the hyphae like shriveling, breakage and desication of the pathogens by PGPR B. cereus (RBacDOB-S24) and endophyte P. aeruginosa (BacDOB-E19). Selected isolates showed multiple Plant growth promoting traits. The rhizome bacterization followed by soil application of B. cereus (RBacDOB-S24) showed lowest Percent Disease Incidence (PDI) of rhizome rot and leaf blight, 16.4% and 15.5% respectively. Similarly, P. aeruginosa (BacDOB-E19) recorded PDI of rhizome rot (17.5%) and leaf blight (17.7%). The treatment of these promising isolates exhibited significant increase in plant height and fresh rhizome yield/plant in comparison with untreated control under greenhouse condition. Thereby, these isolates can be exploited as a potential biocontrol agent for suppressing rhizome rot and leaf blight diseases in turmeric.

Isolation, Identification , and Biodegradability of Phosphamidon-Degrading Bacteria (Phosphamidon 분해세균의 분리동정 및 생분해능)

  • 강양미;송홍규;안태석;허성남
    • Korean Journal of Microbiology
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    • v.35 no.1
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    • pp.61-64
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    • 1999
  • Organophosphorus inseclicide phosphamidon-degrading bacteria were isolated from agricultural soils and identified using Biolog microtiter assay. All Gram-positive degrading bacterial strains belong to genus Bacillus and many Gram-negative bacteria were rare soil species. Among them fast growing strains on phosphamidon-containing minimal medium were sclected and their biodegrading capability wcre measured. YD-17 which was identified as Capnocytophaga gingivalis showed the highest biodegradation rate. It could incrcase the removal of phosphamidon up to 52%. During the biodegradation continuous increase of amount of cell protein was observed, which indicated that phosphamidon was utilized as a carbon source for phosphamidon-degrading bacteria.

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Characterization of a Nitrogen Fixing Bacteria Mycobacterium hominis sp. AKC-10 Isolated from the Wetland (습지에서 분리한 질소고정 세균인 Mycobacterium hominis sp. AKC-10의 특성)

  • Hong, Sun-Hwa;Shin, Ki-Chul;Lee, Eun-Young
    • Microbiology and Biotechnology Letters
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    • v.38 no.3
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    • pp.302-307
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    • 2010
  • Nitrogen is an element need to grow plants growth. Plants take up nitrogen in the form of nitrate or ammonium. Most of plants absorb nitrogen source as fertilizers. But from 50 to 70% of fertilizers applied were washed away. This study was conducted to isolate free-living nitrogen fixing bacteria from reed and to examine its beneficial traits for developing sustainable biofertilizers. Enriched consortium obtained from a reed in Ansan was developed for the fixing of nitrogen. Nitrogen fixing bacteria isolated from an enriched culture in Congo Red Medium was analyzed by 16s rDNA sequencing. AKC-10 was isolated and shown to have excellent nitrogen fixing ability. The optimum conditions of nitrogen fixing ability were $25^{\circ}C$ ($237.50{\pm}39.65\;nmole{\cdot}mg-protein^{-1}{\cdot}h^{-1}$ and pH 7 ($168.335{\pm}12.84$ nmole/hr mg-protein). It was identified as Microbacterium hominis [(AKC-10 (similarity : 99%)]. This strain was had to IAA (indole-3-acetic acid) productivity and ACC(1-aminocyclopropane-1-carboxylic acid) deaminase activity. Therefore, Microbacterium hominis AKC-10 stimulated plant development in the soil, enhancing the efficiency of remediation.