• Journal of Life Science
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• v.21 no.3
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• pp.459-463
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• 2011

The genome of the rhesus monkey has diverged as an average sequence identity of ~93%. The rhesus monkey has been widely used as a non-human primate in the field of biomedical and evolutional research. Insertion of transposable elements (TEs) induced several events such as transcriptional diversity and different expression in host genes. In this study, 112 transcripts were identified from a full-length cDNA library of brain tissues of the rhesus monkey. One transcript (R54) showed a different expression pattern between human and rhesus monkey tissues. This phenomenon can be an explanation that R54 transcript was acquired by splicing a donor site derived from exonization of the L2A element. Therefore, integration of TEs during primate radiation could contribute to transcriptional diversity and gene regulation.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.27 no.12C
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• pp.1215-1227
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• 2002

This paper presents a genetic algorithmic approach to shortest path (SP) routing problem. Variable-length chromosomes (strings) and their genes (parameters) have been used for encoding the problem. The crossover operation that exchanges partial chromosomes (partial-routes) at positionally independent crossing sites and the mutation operation maintain the genetic diversity of the population. The proposed algorithm can cure all the infeasible chromosomes with a simple repair function. Crossover and mutation together provide a search capability that results in improved quality of solution and enhanced rate of convergence. Computer simulations show that the proposed algorithm exhibits a much better quality of solution (route optimality) and a much higher rate of convergence than other algorithms. The results are relatively independent of problem types (network sizes and topologies) for almost all source-destination pairs.

• Journal of Microbiology and Biotechnology
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• v.28 no.8
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• pp.1318-1331
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• 2018

Lettuce (Lactuca sativa L.) is a major ingredient used in many food recipes in South Korea. Lettuce samples were collected during their maximum production period between April and July in order to investigate the microbiota of lettuce during different seasons. 16S rRNA gene-based sequencing was conducted using Illumina MiSeq, and real-time PCR was performed for quantification. The number of total bacterial was greater in lettuce collected in July than in that collected in April, albeit with reduced diversity. The bacterial compositions varied according to the site and season of sample collection. Potential pathogenic species such as Bacillus spp., Enterococcus casseliflavus, Klebsiella pneumoniae, and Pseudomonas aeruginosa showed season-specific differences. Results of the network co-occurrence analysis with core genera correlations showed characteristics of bacterial species in lettuce, and provided clues regarding the role of different microbes, including potential pathogens, in this microbiota. Although further studies are needed to determine the specific effects of regional and seasonal characteristics on the lettuce microbiota, our results imply that the 16S rRNA gene-based sequencing approach can be used to detect pathogenic bacteria in lettuce.

• Korean journal of applied entomology
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• v.46 no.3
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• pp.375-383
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• 2007

To find out the affection of the sampling techniques to the result of a faunistic study, we surveyed the insect fauna of the Chungbuk National University (four different sites) for a year, from spring to fall. For each site, four different collecting methods: light trap, net sweeping, pitfall trap, and window trap, were applied and the collecting was done every other week for a total of 16 times. A total of 14 orders and 672 species were collected. 501 species were collected by the light trap, which covers about 75% of the total number of species, turn out to be the most effective, while other methods could only cover 18% or less. On average, only about 30% of the species collected at a given time of collecting were re-collected at the next collecting, which means about 70% of the species collected from the first collecting remains not collected in the next collecting if you collect insects every other week. The result suggests that, in addition to applying diverse collecting methods, frequent sampling, or narrow sample window, is another very important factor for a good representation of species diversity in an insect faunistic study.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.12 no.3
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• pp.142-163
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• 2009

Taebaek city is located in the mountainous plateau area therefore the major industry was coal industry. According to dramatically declining of the major industry, Taebaek city is need to alternative industry which associated with considering the geographical characteristics of natural tourism resources for increasing the local economy. On the basis of these reasons, this study can be suggested ecological planning and mitigation of deterioration technique about the these study site. That is the reserved area for mountainous experience theme park. As the results of environmental ecology assessment are following as; The natural ecosystem areas, multi-layer structure forest such as forest of Pinus densiflora, forest of Quercus mongolica and deciduous forest have a high value of nature, diversity and potential. In addition, wild bird habitats were important area as a inhabitation, breeding, feeding and hiding. Therefore, on these areas should be preserved. Also, it needs to conserve on there such as more than three types of wild bird inhabitate areas, the fringe of high biological diversity, the wetland that have got good vegetation condition and the function of amphibia, reptiles crossing. In addition, inhabitation, the waterway of wetland form that have got wide waterside width needs to conserve. In conclusion, on the basis of analysis results such as conditions of plan, environment, ecological assessments, survey informations are able to suggest the connectivity of the axis of forest and management plan. Moreover, in the part of forest restoration plan, we suggest the plan of transplant for a compensation of damaged forest by land use.

• Mycobiology
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• v.48 no.5
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• pp.351-363
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• 2020

Here, we investigated fungal microbiota in the understory root layer of representative well-conserved geographically segregated natural wetlands in the Korean Peninsula. We obtained 574,143 quality fungal sequences in total from soil samples in three wetlands, which were classified into 563 operational taxonomic units (OTU), 5 phyla, 84 genera. Soil texture, total nitrogen, organic carbon, pH, and electrical conductivity of soil were variable between geographical sites. We found significant differences in fungal phyla distribution and ratio, as well as genera variation and richness between the wetlands. Diversity was greater in the Jangdo islands wetland than in the other sites (Chao richness/Shannon/Simpson's for wetland of the Jangdo islands: 283/6.45/0.97 > wetland of the Mt. Gariwang primeval forest: 169/1.17/0.22 > wetland of the Hanbando geology: 145/4.85/0.91), and this variance corresponded to the confirmed number of fungal genera or OTUs (wetlands of Jangdo islands: 42/283> of Mt. Gariwang primeval forest: 32/169> of the Hanbando geology: 25/145). To assess the uniqueness of the understory root layer fungus taxa, we analyzed fungal genera distribution. We found that the percentage of fungal genera common to two or three wetland sites was relatively low at 32.3%, while fungal genera unique to each wetland site was 67.7% of the total number of identified fungal species. The Jangdo island wetland had higher fungal diversity than did the other sites and showed the highest level of uniqueness among fungal genera (Is. Jangdo wetland: 34.5% > wetland of Mt. Gariwang primeval forest: 28.6% > wetland of the Hanbando geology: 16.7%).

• Proceedings of the Plant Resources Society of Korea Conference
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• 2019.04a
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• pp.90-90
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• 2019

This study was carried out to investigate the vegetation and vegetation structure of Mt. Man in Hwacheon Gun from April to October 2018. The survey site is located in the northern part of South Korea where the climate is similar to that of North Korea. The purpose of this study is to provide basic information for efficient ecological forest management after unification. A total of 341 vascular plant taxa are recorded, representing 221 genera, 4 subspecies, 42 varieties and 6 forms in 84 families. Rare species, including Crataegus komarovii and Amitostigma gracile are found across 10 taxa; 8 families, 10 genera, 9 species, 1 variety. Naturalized Plants, including Ambrosia artemisiifolia and Erigeron annuus found across 11 taxa; 6 families, 10 genera, 11 species. Dominant tree species of the tree layer based on the highest importance values were: Quercus mongolica (23.47%), Larix kaempferi (11.43%), Fraxinus rhynchophylla (8.30%), in the subtree layer were: Lindera obtusiloba (11.38%), Acer pictum subsp. mono (11.33%), Fraxinus rhynchophylla (9.80%) and in the shrub layer were: Lindera obtusiloba (10.22%), Fraxinus rhynchophylla (8.43%), Rubus crataegifolius (8.00%), in the herb layer Pteridium aquilinum var. latiusculum (5.67%), Oplismenus undulatifolius (5.00%), Lysimachia clethroides (3.49%) respectively. The species diversity of Mt. Man was 1.1764 in the tree layer, 1.2403 in the subtree layer, 1.4135 in the shrub layer, and 1.7416 in the herb layer. In conclusion, if we utilize the flora and vegetation structure surveyed in Mt. Man, we can effectively manage the degraded forests with similar altitudes and climate zones in North Korea.

• Korean Journal of Environment and Ecology
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• v.36 no.1
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• pp.56-71
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• 2022

This study was conducted to build basic terrestrial insect data for the management of the persimmon plantations in the Sangju dried persimmon agricultural area. The survey identified terrestrial insect species were 7 orders, 77 families, and 1,925 individuals of 177 species. And the number of species that appeared in each village was in the order of Seoman II Village in Naeseo Township > Seoman I Village in Naeseo Township > Soeun Village in Oenam Township. Hemiptera and Coleoptera predominated throughout the site due to the characteristics of the cultivated land. The special species were 13 Korean endemic species, 2 vulnerable (VU) species, 22 least concern (LC) species, 42 not-evaluated (NE) species on the national red list, and 2 species of ecosystem disturbance wildlife. A result of the cluster analysis identified the Ectmetopterus micantulusas the dominant species and Ceutorhynchus albosuturalisas the subdominant species. The species diversity (H') was 1.1636-1.6022, evenness (J') was 0.6748-0.7611, and dominance (D) was in the range of 0.2389-0.3252.

• Journal of Ecology and Environment
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• v.47 no.4
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• pp.168-176
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• 2023

Background: Many insectivorous bats have flexible diets, and the difference in prey item consumption among species is one of the key mechanisms that allows for the avoidance of interspecies competition and promotes coexistence within a microhabitat. In Korea, of the 24 bat species that are known to be distributed, eight insectivorous bats use forest areas as both roosting and foraging sites. Here, we aimed to understand the resource partitioning and coexistence strategies between two bat species, Myotis ikonnikovi and Plecotus ognevi, cohabiting the Mt. Jumbong forests, by comparing the differences in dietary consumption based on habitat utilization. Results: Upon examining their dietary composition using the DNA meta-barcoding approach, we identified 403 prey items (amplicon sequence variants). A greater prey diversity including Lepidoptera, Diptera, Coleoptera, and Ephemeroptera, was detected from M. ikonnikovi, whereas most prey items identified from P. ognevi belonged to Lepidoptera. The diversity index of prey items was higher for M. ikonnikovi (H': 5.67, D: 0.995) than that for P. ognevi (H': 4.31, D: 0.985). Pianka's index value was 0.207, indicating little overlap in the dietary composition of these bat species. Our results suggest that M. ikonnikovi has a wider diet composition than P. ognevi. Conclusions: Based on the dietary analysis results, our results suggests the possibility of differences in foraging site preferences or microhabitat utilization between two bat species cohabiting the Mt. Jumbong. In addition, these differences may represent one of the important mechanism in reducing interspecific competition and enabling coexistence between the two bat species. We expected that our results will be valuable for understanding resource partitioning and the coexistence of bats inhabiting the Korean forests.

• Journal of Forest and Environmental Science
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• v.36 no.3
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• pp.175-186
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• 2020

This study approaches, from a floristic perspective, the under-researched human-primate competition for forest resources. Investigating the human impact on fruit trees edible for Kinda baboons (Papio kindae Lönnberg), we have collated dietary data on a free-ranging troop and floristic information on two forest sites of the Kundelungu National Park (KNP), Democratic Republic of Congo: the relatively intact Integral Zone (IZ) and the human-disturbed Annex Zone (AZ). Trees with DBH≥10 cm have been identified, counted and measured throughout 22 sample plots (11 per site), each measuring 1,000 ㎡. A total of seven woody species whose fruits are eaten by Kinda baboons were recorded. Four of them, namely the Sycamore fig Ficus sycomorus L., the Mobola plum Parinari curatellifolia Planch. ex Benth, the Kudu berry Pseudolachnostylis maprouneifolia Pax and the Monkey orange Strychnos innocua Delile were found in both sites, while the Large-leaved jackal-berry Diosyros kirkii Hiern and the Buffalo thorn Ziziphus mucronata Willd. were exclusively in the IZ, and Strychnos cocculoides Baker only in the AZ. Compared to the IZ, the AZ had lower values of stem density, species richness and diversity indices, suggesting a negative human impact on baboon-edible trees, in line with our hypothesis. Moreover, as was expected, human activities decreased the abundance of larger baboon-edible fruit trees. However, the size-class distribution of P. curatellifolia depicted a reverse J-curve in the AZ. The abundant younger P. curatellifolia trees remaining in that human-disturbed site constitute an important food stock for baboons, if well preserved. These results also illustrate the critical role of rangers' patrols, formerly more frequent (and presumably efficient) in the IZ than in the AZ of the Park. Their implications on baboons and miombo forests are discussed from both the research and conservation perspectives.