• Title/Summary/Keyword: Shell forming

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Ligand Binding Properties of the N-Terminal Domain of Riboflavin Synthase from Escherichia coli

  • Lee, Chan-Yong;Illarionov, Boris;Woo, Young-Eun;Kemter, Kristina;Kim, Ryu-Ryun;Eberhardt, Sabine;Cushman, Mark;Eisenreich, Wolfgang;Fischer, Markus;Bacher, Adelbert
    • BMB Reports
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    • v.40 no.2
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    • pp.239-246
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    • 2007
  • Riboflavin synthase from Escherichia coli is a homotrimer of 23.4 kDa subunits and catalyzes the formation of one molecule each of riboflavin and 5-amino-6-ribitylamino- 2,4(1H,3H)-pyrimidinedione by the transfer of a 4-carbon moiety between two molecules of the substrate, 6,7- dimethyl-8-ribityllumazine. Each subunit comprises two closely similar folding domains. Recombinant expression of the N-terminal domain is known to provide a $C_2$-symmetric homodimer. In this study, the binding properties of wild type as well as two mutated proteins of N-terminal domain of riboflavin synthase with various ligands were tested. The replacement of the amino acid residue A43, located in the second shell of riboflavin synthase active center, in the recombinant N-terminal domain dimer reduces the affinity for 6,7-dimethyl-8-ribityllumazine. The mutation of the amino acid residue C48 forming part of activity cavity of the enzyme causes significant $^{19}F$ NMR chemical shift modulation of trifluoromethyl derivatives of 6,7-dimethyl-8-ribityllumazine in complex with the protein, while substitution of A43 results in smaller chemical shift changes.

Rapid, Sensitive, and Specific Detection of Salmonella Enteritidis in Contaminated Dairy Foods using Quantum Dot Biolabeling Coupled with Immunomagnetic Separation

  • Kim, Hong-Seok;Chon, Jung-Whan;Kim, Hyunsook;Kim, Dong-Hyeon;Yim, Jin-Hyuk;Song, Kwang-Young;Kang, Il-Byung;Kim, Young-Ji;Lee, Soo-Kyung;Seo, Kun-Ho
    • Journal of Dairy Science and Biotechnology
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    • v.33 no.4
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    • pp.271-275
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    • 2015
  • Colloidal semiconductor CdSe-ZnS core-shell nanocrystal quantum dot (Qdot) are luminescent inorganic fluorophores that show potential to overcome some of the functional limitations encountered with organic dyes in fluorescence labeling applications. Salmonella Enteritidis has emerged as a major cause of human salmonellosis worldwide since the 1980s. A rapid, specific, and sensitive method for the detection of Salmonella Enteritidis was developed using Qdot as a fluorescence marker coupled with immunomagnetic separation. Magnetic beads coated with anti-Salmonella Enteritidis antibodies were employed to selectively capture the target bacteria, and biotin-conjugated anti-Salmonella antibodies were added to form sandwich immune complexes. After magnetic separation, the immune complexes were labeled with Qdot via biotin-streptavidin conjugation, and fluorescence measurement was carried out using a fluorescence measurement system. The detection limit of the Qdot method was a Salmonella Enteritidis concentration of $10^3$ colony-forming units (CFU)/mL, whereas the conventional fluorescein isothiocyanate-based method required over $10^5CFU/mL$. The total detection time was within 2 h. In addition to the potential for general nanotechnology development, these results suggest a new rapid detection method of various pathogenic bacteria from a complex food matrix.

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MULTI-FREQUENCY RADIO OBSERVATIONS OF MOLECULAR CLOUDS IN THE IMMEDIATE VICINITIES OF HB3 (초신성 잔해 HB3와 인접 분자운의 다파장 전파관측)

  • KIM KWANG-TAE;LEE CHANG-WON
    • Publications of The Korean Astronomical Society
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    • v.13 no.1 s.14
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    • pp.149-166
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    • 1998
  • The structure and environments of the molecular clouds near the SNR $HB3(G132.7\pm1.3)$ are studied. The molecular complex which is located at the southern rim of HB3 was proposed by former investigators as the one interacting with HB3. This complex region of $2^{\circ}\times2^{\circ}\;at\;l=133^{\circ}$ has been observed at $^{12}CO,\;^{13}CO,\;J=1-0\;at\;a\;1'$, resolution with the 14-m radio telescope at Taeduk Radio Astronomy Observatory. We have reached to the following four conclusions. The possibility that these molecular complex and HB3 are interacting with each other cannot be supported with any of our data. The morphologies of the two show no similarities. Neither particular features for the interaction are found in the CO lines. The hypothetical 'Molecular wall' which was expected to exist on the northwestern rim of HB3 as a cause for the noncircular morphology of HB3 is turned out to be nonexistent in CO. The molecular complex which resembles a 'bar' at a low resolution is now resolved into a U-shaped shell. It seems that the U-shape is consist of two independent components. No peculiarities, such as unseen masses or bright stars capable of forming HlI regions, are found within the U-shape region. The total mass included in the complex is estimated to be $M_{total}\;=\;2.9\~8.4\times10^5\;M_\bigodot$, which is in good agreement with previous observations within errors. Considering about 12 clumps distinguishable within the complex, the total mass implies that masses of each of clumps are on the order of $10^4\;M_\bigodot$, which makes these good objects for further studies in relation to star-formation. Especially the clumps associated with W3 are worthy for more high resolution observations for better understanding of astrophysical phenomenon ongoing in them.

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Experimental Study on the Effect of Cadmium Containing Shellfish by the LongTerm Intake (카드뮴 (Cadmium)오염 조개 섭취가 생체장기에 미치는 연향의 실험적 연구)

  • Soh, Chin-Thack;Yoo, Il-Soo;Park, Hyun;Kim, Sook-Hyang;Kim, Jae-Jin;Min, Duk-Young
    • The Korean Journal of Malacology
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    • v.9 no.2
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    • pp.85-93
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    • 1993
  • Contamination of heavy metals in water and sediments along Mantyeong (river) has reached up to critical level, The object of the study is to dlucidate some macroinvertebrates which inhabit along the river in respect to the modulatory role in reducing the pollution. For the purpose, Scapharca subcrenata(sea shell) which is common in numbers and biomass in the area was collected, and cadmium (Cd) was subjected as a reference metal in the experiment. The seashell was dried and autoclaved, followed by pellet preparation under various concentration of Cd: 50,100,250,500 and 1,500 ug /pellet. Mice were fed for 3 months, althrough last group(5 mice), 1,500 ug/pellet, died within 4 weeksof the administration.MT-Cd in liver and kidney increased in correlation with the amont of Cd concentration in pellet, especially in kidney than in liver. Liver and kidney of the mice showed pathological changes such as cellular infiltration and focal necrosis in liver, and peri-tubular cell infiltration or tubular necrosis etc. The changes were more intensive by amount of the Cd. Overall results in the present study suggest that Cd may eventually combine with soluble-protein forming metalloprotein, then reduce the toxicity of heavy metal, How the formed Mt-Cd is discharged from the kidney and the mechanism shall be the further subject to be clarified.

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Study on the monthly changes of Perkinsus infection in Komsoe Bay, Chullabukdo, Korea

  • Park, Kwang-Sik;Park, Kyung-Il
    • Proceedings of the Korean Society of Fisheries Technology Conference
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    • 2000.05a
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    • pp.505-505
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    • 2000
  • Perkinsus sp. has been identified as responsible organism for the decrease in Manil clam production along the west and south coast of Korea. Monthly investigation on infection intensity and pathology of Perkinsus infected Manila clam population was carried out in Komsoe Bay located in the west coast during February and December 1999. About one hundred clams were collected each month for the analysis. Infected clams were incubated in fluid thioglycollate media over a week, stained with iodine solution, digested with 2M NaOH and the number of Perkinsus present in an individual recorded. Histological slides were also prepared from infected clams and their pathologic symptoms were examined using a microscope. Trophozoites of Perkinsus sp. were dominantly distributed on gills and epithelia of digestive glands however a few numbers could be detected at siphons and foot tissues. Heavily infected clams often exhibited white spots on mantle and foot tissues due to the inflammatory reaction of the hemocytes, forming nodules. Trophozoites were also found along the connective tissues of follicles during spawning season indicating that Perkinsus sp. may disturb reproduction of the clam. Total number of Perkinsus sp. in an individual clam varied from none to 9, 550, 000 with a monthly mean of 279, 663 to 2, 198, 558 during the course of study. The number of Perkinsus sp. in the clam was found to lowest durin July and August when unusually low salinity was recorded in this area due to the heavy rain. Highest monthly infection intensity in terms of total number of Perkinsus sp. i clam was observed in February, when water temperature recorded as lowest during the study. Small size of clams with shell length of ten mm or less were not infected with Perkinsus sp. It was concluded that Perkinsus infection in Manila clam is in pa controlled by changes in salinity and clam growth; low salinity environment minimize infection intensity while tile clams get more Perkinsus as they grow.

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Preparation of Agar Microcapsules and Analysis of Their Internal Structure (한천 마이크로캡슐의 제조 및 내부구조 분석)

  • Park, Chul-Wan;Lee, Shin-Young;Hur, Won
    • KSBB Journal
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    • v.22 no.4
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    • pp.239-243
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    • 2007
  • A method of forming agar microcapsule with fibroin coating was developed in this report. The capsules were prepared from a W/O emulsion of hot agar in mineral oil and were subsequently coated by fibroin. The capsules were harvested as precipitated aggregates, which can be dispersed in an aqueous media. The diameter of the microcapsule was less than $10{\mu}m$ by microscopic observation and 90% of them were between $1.32{\mu}m\;and\;6.0{\mu}m$. The structure of the aggregates and their dispersed microspheres were investigated by scanning electron microscope. Confocal microscopy was applied to visualize the core-shell structure of the agar microcapsule with fibroin coating. Thermogravimetric analysis (TGA) measured their composition to be agar 51.2%, fibroin 13.8%, Span 80 1.4% by weight.

A Study on Characteristics and Burial Ages of Sand Deposits at Hasari, Baeksoo, Yeonggwang (영광군 백수읍 하사리 일대의 사질 퇴적층 특성과 매몰 연대에 대한 연구)

  • Shin, Won Jeong;Yang, Dong Yoon;Kim, Jong Yeon
    • Journal of The Geomorphological Association of Korea
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    • v.24 no.1
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    • pp.25-38
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    • 2017
  • To investigate the characteristics of sand sediment topography in the Yeonggwang coastal area of Chonnam and to collect evidence of the past extreme events causing coastal flooding, three sites were surveyed among the sediments of Baeksoo-eup Hassari. In this study, the changes of particle characteristics, chemical composition, and the age of deposition of sediments were investigated. The sediments near Baeksoonam Elementary School at the elevation of 10m near the paleo-coastline are estimated to have been deposited at about 3,400 years ago and the grain size of the upper part of the sandy layer is in the range of $2.47-2.11{\varphi}$. The burial age of the sediment layer at Sadeung junction(BSN-B) was about 100 years. Considering the distance from the current coastline, the sands forming the dune are estimated to have been moved or deposited from the nearby area or the other dune on the front side. The mean grain size is observed to be fining upward. Especially, the mean of the upper part is about $2.3{\varphi}$, which is similar to other survey points. The averaged grain size of the lower part of the BSNC (Hasari-1 Gu) was $2.196{\varphi}$ and the upper part was $2.16{\varphi}$. The sorting showed that the upper part was slightly poorer than the lower, and it was difficult to specify the change of the environment. The burial age of the lower layer, which contains shells, was about 300 years. Considering previous studies, this shell layer is presumed to have formed by coastal flooding, such as a storm surge.

Effect of Humenolepis nana infection on immunological responses of mice to sRBC (마우스에 있어서 왜소조충 감염이 sRBC에 대한 면역능에 미치는 영향)

  • Lee, Jae-Gu;Yuk, Sim-Yong;Park, Bae-Geun
    • Parasites, Hosts and Diseases
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    • v.27 no.1
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    • pp.23-34
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    • 1989
  • In an attempt to investigate the effect of Hymenolepis dana infection on immunological responses to sRBC in ICR strain of mice, cellular and humoral immune responses were chronologically monitored after sensitization with sRBC. Mice weighing about 20 g were allocated into artificial and natural infection groups. The shell-free eggs of H. dana were inoculated into mice on the day 0 (initial) and day 10 in the former group, and praziquantel (25 mg/kg/day) was administered for 3 days to the one half of the mice at the 15th day after the first inoculation and to all of the mice in natural infection group. In artificial infection group, the delayed-type hypersensitivity (DTH) to sRBC was considerably decreased on the day 10 after the first inoculation, and then elevated gradually to normal. Eosinophils in the peripheral blood increased slightly. The hemagglutinin (HA) and hemolysin (HE) titers during the early stage were shown to be more or less higher than those of control. Thereafter, the titers were returned to normal, followed by a transient decrease on the day 15 post-infection. The sRBC rosette and antibody-treated rosette-forming capacities on the day 15 post.infection were temporarily lowered but became higher thereafter. The mucosal mast cells (MMC) in the small intestine were gradually increased to make a peak on the day 10 post-infection and then maintained more or less at lower level. After praziquantel treatment, the DTH and the number of eosinophils were decreased slightly and the MMC number and sRBC rosette-forming capacity were considerably decreased. The titers of HA and HE and antibody-treated rosette-forming capacity, however, were elevated in general. In natural infection group, the DTH, the number of eosinophils, and MMC which were elevated due to H. dana infection were gradually returned to normal after prasiquantel treatment. The titers of HA and HE which were decreased by parasite infection were increased to normal after the treatment. However, the capacities of sRBC rosette or antibody-treated rosette formation were maintained at low levels in spite of the treatment. These results revealed that the immune responses to sRBC were significantly activated during H. dana infection, although they were transiently decreased during the days 10~15 post-infection.

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Study of Oil Palm Biomass Resources (Part 4) Study of Pelletization of Torrefied Oil Palm Biomass - (오일팜 바이오매스의 자원화 연구 IV - 반탄화된 오일팜 바이오매스의 펠릿 성형 특성 연구 -)

  • Sung, Yong Joo;Kim, Chul-Hwan;Lee, Ji-Young;Cho, Hu-Seung;Nam, Hye-Gyeong;Park, Hyeong-Hun;Kwon, Sol;Kim, Se-Bin
    • Journal of Korea Technical Association of The Pulp and Paper Industry
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    • v.47 no.1
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    • pp.24-34
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    • 2015
  • Domestic companies supplying electricity must increase obligatory duty to use renewable energy annually. If not met with obligatory allotment, the electricity-supply companies must pay RPS (Renewable Portfolio Standards) penalty. Although the power plants using a pulverizing coal firing boiler could co-fire up to around 3 per cent with wood pellets mixed in with coal feedstock without any major equipment revamps, they recorded only about 60 per cent fulfillment of RPS. Consequently, USD 46 million of RPS penalty was imposed on the six power supplying subsidiaries of GENCOs in 2014. One of the solutions to reduce the RPS penalty is that the power supply companies adopt the co-firing of torrefied lignocellulosic biomass in coal plants, which may contribute to the use of over 30 per cent of torrefied biomass mixed with bituminous coals. Extra binder was required to form pellets using torrefied biomass such as wood chips, PKS (Palm Kernel Shell) and EFB (Empty Fruit Bunch). Instead of corn starch, 30, 50 and 70 per cent of Larix saw dusts were respectively added to the torrefied feedstocks such as Pinus densiflora chips, PKS and EFB. The addition of saw dusts led to the decrease of the calorific values of the pellets but the forming ability of the pelletizer was exceedingly improved. Another advantage from the addition of saw dusts stemmed from the reduction of ash contents of the pellets. Finally, it was confirmed that torrefied oil palm biomass such as PKS and EFB could be valuable feedstocks in making pellets through improved binding ability.

Effect of Additives on the Powder Characteristics of Peonja Dry Elixir (편자 고형엘릭실제의 분체 특성에 미치는 부형제의 영향)

  • Yong, Chul-Soon;Lee, Jong-Dal;Kim, Chong-Kook;Choi, Han-Gon
    • Journal of Pharmaceutical Investigation
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    • v.31 no.2
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    • pp.81-87
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    • 2001
  • The purpose of this study was to investigate the effect of additives on the powder characteristics of peonja dry elixir. Peonja dry elixirs were prepared with various amounts of dextrin using a spray-dryer, and their powder characteristics such as flow, cohesion and compressibility were evaluated as an angle of repose, cohesion index and compressibility index, respectively. Their powder characteristics were not significantly different from one another, indicating that the hydrophilic dextrin, a base of dry elixir hardly affected their powder characteristics. Peonja dry elixirs were prepared with 10% dextrin and various amounts of additives such as mannitol (hydrophilic excipient), sodium lauryl sulfate (surfactant), colloidal silica (hydrophobic excipient) and HPMC (polymer), respectively, and their angle of repose, cohesion index and compressibility index were measured. The powder characteristics of peonja dry elixirs prepared with mannitol were not significantly different from one another, indicating that the mannitol scarcely improved the powder characteristics of peonja dry elixirs. The angle of repose and cohesion index of peonja dry elixirs significantly decreased with increasing amount of sodium lauryl sulfate to 0.3% followed by no significant changes in them. The cohesion index of peonja dry elixir significantly decreased with increasing amount of colloidal silica. The angle of repose and cohesion index of peonja dry elixir significantly decreased with increasing amount of HPMC to 0.3% followed by an abrupt increase in them. However, the compressibility index of peonja dry elixir significantly increased with increasing amount of HPMC to 0.3% followed by an abrupt decrease in them. Our results suggested that a small amount of sodium lauryl sulfate, colloidal silica and HPMC improved markedly the powder characteristics of peonja dry elixirs due to forming stronger and less hygroscopic shell of peonja dry elixirs. Among the peonja dry elixirs studied, the peonja dry elixir prepared with 0.3% sodium lauryl sulfate and 0.3% HPMC had the lowest angle of repose of $27^{\circ}$ and cohesion index of 37.8%, and the highest compressibility index of 38.7%, respectively. Thus, sodium lauryl sulfate and HPMC appear to be promising additives for peonja dry elixir, if used in adequate amounts.

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