• Title/Summary/Keyword: Shannon species diversity index

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Species Composition of Benthic Macroinvertebrates and Water Evaluation Using Their Species in the Songji River in Korea (한국 송지천에서 저서성대형무척추동물의 종조성과 이를 이용한 수질 평가)

  • Lee, Byeong Ryong;Huh, Man Kyu
    • Journal of Life Science
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    • v.29 no.5
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    • pp.580-587
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    • 2019
  • Benthic macroinvertebrates were analyzed in March, June, September, and December 2018 to evaluate water quality in the Songji River in Sacheon-ci, Korea. The identified benthic macroinvertebrates included 447 individuals belonging to 20 species, 18 families, 12 orders, 5 classes, and 3 phyla. Various ecological parameters were estimated for evaluation of the river status. The total ecological score of benthic macroinvertebrate community (TESB) varied from 17 (Station D) to 41 (Station A). The saprobic index and ecological score of benthic macroinvertebrate community (ESB) for the evaluation of river status revealed a water quality evaluation at Station A of II (oligosaprobic), indicating some satisfactory water protection. The benthic macroinvertebrate index (BMI) varied from 25.207 (Site C) to 39.348 (Station A). The evaluation of the river status at Stations C and D was polysaprobic, and sensitive taxa were absent. The mean Shannon-Weaver index (H') of diversity varied from 1.288 (Station D) to 2.250 (Station A). The classification of saprobity based on H' was ${\beta}$-mesosaprobic at Station A and ${\alpha}$-mesosaprobic at the other stations. The value of geometric density was varied from 1.229 (Station A) to 2.071 (Station D), with a mean of 1.582. An artificial load is being added to this river. One of load is the rectal river construction which flows straight through the river physics. Thus, the environment of living organisms deteriorates due to insufficient water. In order to secure the quality of the Songji River and a good environmental habitat, several low-height stepped-beam structures are required.

Ecological Attributes by Forest Types in the Natural Forest of Mt. Odae

  • Choi, Yeong Hwa;Kim, Ji Hong;Chung, Sang Hoon
    • Journal of Forest and Environmental Science
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    • v.33 no.1
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    • pp.66-73
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    • 2017
  • This study was conducted to evaluate the ecological attributes of forest types which were classified by cluster analysis in the natural forest of Mt. Odae on the basis of the vegetation data (232 sampling points) from the point-quarter sampling methods. For the classified types, the species composition was expressed by importance value to describe the stand structure and the species diversity was quantified using the Shannon's diversity index. Recognized forest types were 1) Quercus mongolica-Pinus densiflora-Betula ermanii forest type, 2) Mixed mesophytic forest type, 3) Q. mongolica forest type, 4) B. ermanii forest type. Species diversity indices of total and overstory were highest in the Mixed mesophytic forest type (3.465 and 2.942), and lowest in the B. ermanii forest type (0.118 and 0.832). In addition to that, Q. mongolica-P. densiflora-B. ermanii forest type was calculated as 3.226 and 2.565, and Q. mongolica forest type was calculated as 2.776 and 1.218 in total and overstory, respectively. It was considered that after the P. densiflora and B. ermanii first invaded and site condition became good, Q. mongolica-P. densiflora-B. ermanii forest type was dominated by Q. mongolica. Mixed mesophytic forest type showed the most stable stand structure with various species distributed uniformly. Q. mongolica forest type would preserve the present stand status for a while, and the B. ermanii in B. ermanii forest type would be pressed by other species over time.

Species Diversity, Composition and Stand Structure of Tropical Deciduous Forests in Myanmar

  • Oo, Thaung Naing;Lee, Don Koo;Combalicer, Marilyn;Kyi, Yin Yin
    • Journal of Korean Society of Forest Science
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    • v.97 no.2
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    • pp.171-180
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    • 2008
  • The characterization of tree species and forest stand conditions is useful in the planning of activities aimed to conserve biodiversity. The main objective of this study was to describe tree species diversity, species composition and stand structure of tropical deciduous forests distributed in three regions in Myanmar. Forest inventory was conducted in the Oktwin teak bearing forest, the Letpanpin community forest and Alaungdaw Kathapa National Park. According to the Jackknife estimator of species richness, 85 species (${\pm}18.16$), 70 species (${\pm}5.88$) and 186 species (${\pm}17.10$) belonging to 31 families were found in the Oktwin teak bearing forest, 33 families in Letpanpin community forest and 53 families in Alaungdaw Kathapa national park, respectively. Shannon's diversity indices were significantly different among the forests (p<0.05). It ranged from 3.36 to 4.36. Mean tree density (n/ha) of the Oktwin teak bearing forest, Letpanpin community forest and Alaungdaw Kathapa National Park were 488 (${\pm}18.6$), 535 (${\pm}15.6$) and 412 (${\pm}14.1$), while basal areas per hectare were $46.96m^2({\pm}3.23),\;49.01m^2({\pm}5.08)\;and\;60.03m^2({\pm}3.88)$, respectively. At the family level, Verbenaceae, Myrtaceae and Combretaceae occupied the highest importance value index, while at the species level it was Tectona grandis, Lagerstoremia speciosa and Xylia xylocarpa.

ISSR을 이용한 고추나물 집단의 유전적 다양성과 계통학적 연구

  • Huh, Hong-Wook;Huh, Man-Kyu;Kang, Dong-Ho
    • Journal of Life Science
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    • v.17 no.6 s.86
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    • pp.805-810
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    • 2007
  • Inter simple sequence repeat (ISSR) markers were performed in order to analyse the phylogenetic relationships of eight Hypericum electum populations in Korea. The six primers were produced 37 reproducible ISSR bands. Analysis of ISSR from individual plants of Korean H. erectum resulted in 22 polymorphic bands with 59.5%. Across populations, the mean number of alleles per locus was 1.348 and Shannon's information index was 0.203.Population Mt. Gyeryong had the highest expected genetic diversity (0.175) among all populations. When species were grouped by eight populations, within group diversity was 0.140 (Hs), while among group diversity was 0.472 (G$_{ST}$) on a per locus basis. The estimated gene flow (Nm) for H. erectum was very low (0.561). It is suggested that reproductive isolation by the isolation of geographical distance among H. electum populations and genetic drift may have played roles in shaping the population structure of this species. In phonetic tree, all populations were well separated from each other. Thus, ISSR markers are very effective in classifying natural population levels of genus Hypericum in Korea.

Physical Properties of Soils in Relation to Forest Composition in Moist Temperate Valley Slopes of the Central Western Himalaya

  • Sharma, C.M.;Gairola, Sumeet;Ghildiyal, S.K.;Suyal, Sarvesh
    • Journal of Forest and Environmental Science
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    • v.26 no.2
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    • pp.117-129
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    • 2010
  • The present study was undertaken in moist temperate forest of Mandal-Chopta area in the Garhwal region of Uttarakhand, India. The aim of the present study was to assess the physical properties of soils in relation to the forest structure and composition. Twelve forest types according to the altitude, slope aspect and species compositions were selected for the study. Physical properties of soil i.e., soil colour, soil texture (per cent of sand, silt and clay), moisture content, water holding capacity, porosity, bulk density (gm/$cm^3$) and void ratio were analyzed for three different depths viz., (i) 'upper' (0-10 cm), (ii) 'middle' (11-30 cm) and (iii) 'lower' (31-60 cm) in all the selected forest types. Phytosociological and diversity parameters viz. total basal cover ($Gha^{-1}$), stem density ($Nha^{-1}$), tree species richness, Simpson concentration of dominance and Shannon-Wiener diversity index were also calculated for each forest type. This study also provides the comparisons between the results of physical analysis of the present study with numerous other previous studies in the temperate Himalayan region of the Uttarakhand.

Genetic diversity of the threatened Saussurea dorogostaiskii (Asteraceae) in the Khuvsgul region of Mongolia

  • Nudkhuu NYAMGEREL;Shukherdorj BAASANMUNKH;Batlai OYUNTSETSEG;Dashzeveg OYUNTSETSEG;Joscelyn NORRIS;Hyeok Jae CHOI;Gun-Aajav BAYARMAA
    • Korean Journal of Plant Taxonomy
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    • v.53 no.1
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    • pp.14-24
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    • 2023
  • Saussurea dorogostaiskii Palib. (Asteraceae) is a critically endangered medicinal plant in Mongolia and Russia. We studied the genetic variation of S. dorogostaiskii from three mountains of northern Mongolia. The genetic profile was assessed in 70 individuals from eight populations using five inter-simple sequence repeat markers, producing 53 loci with 96.4% polymorphism across all bands. Shannon's index (I) and Nei's gene diversity (H) value at the species level of S. dorogostaiskii are 0.25 and 0.17, respectively. An AMOVA showed high genetic variation among the populations (22% of populations and 32% of mountains), consistent with the high genetic differentiation (GST = 0.49) and low gene flow (Nm = 0.51) in S. dorogostaiskii populations. Eight populations were clustered into two groups, corresponding to their geographic locations. The low within-population genetic diversity and high genetic differentiation among S. dorogostaiskii populations factor into their endangered designation. This genetic analysis reveals that all populations are equally threatened, and community-based conservation is appropriate for these species.

Community Structure and Environmental Factors of the Major Type of Pinus densiflora Populations in Korea (우리나라 소나무 주요유형지별 식생구조와 환경요인)

  • Yoon, Jung Won;Kim, Yong Shik;Kim, Gi Song;Sung, Jung Won;Park, Ki Hwan;Lee, Chang Hyun;Shin, Hyun Tak;Yi, Myung Hoon
    • Journal of Forest and Environmental Science
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    • v.30 no.1
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    • pp.167-178
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    • 2014
  • The populations of Pinus densiflora in South Korea were grouped into 4 types; Community of Pinus densiflora-Quercus serrata, Community of Pinus densiflora-Quercus mongolica, Community of Pinus densiflora-Fraxinus sieboldiana & Rhus javanica & Quercus mongolica and Community of Pinus densiflora-Prunus sargentii & Rhododendron mucronulatum. The Shannon diversity index was varied between 0.9171 and 1.5016, while the Similarity index was varied between 43.18 and 72.16. The species of Pinus densiflora are correlated positively significant with Carex humilis var. nana, Quercus serrata and Atractylodes ovata and negatively significant with Aster scaber and Sorbus alnifolia in order. According to the Correlation analysis, the relationship between the distribution of Pinus densiflora populations and the environment factors are closely related with the character of forest soil. Thus types for Pinus densiflora are differed. pH, Ex. K and Ex. Ca of Pinus densiflora populations effect No. of species and H'(shannon index). Canopy open effects No. of Individuals of Pinus densiflora community.

Soil Micro-arthropods Fauna in Plantations of the Korean White Pine (Pinus koraiensis). 4. Community Analysis of Oribatid mites (Cryptostigmata) (잣나무 조재지내 토양 미소 절지동물상에 관한 연구. 4. 날개 응애의 군집분석)

  • 권영립;윤경원
    • Korean journal of applied entomology
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    • v.34 no.2
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    • pp.120-126
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    • 1995
  • This study investigated the soil oribatid mite community at planatations of the Korean white pine, planted in different years. The soil samples $(10\times10\times5cm)$ were taken monthly from Jun 1988 to July 1989, and soil microarthropods in th sample were extracted using the Tullgren funnel for 72 hors. The diversity indices decreased at the older plantation sites with the maximum point in January and the minimum in September. The richness indices showed the maximum point in June and the minimum in may. The dominance indices increased at the older plantation and showed the maximum point in April, May, the minimum in January. The indices of aggregation of Oribatid mites species showed concentrated distribution in the average 1.9. The older plantation, the more indices increase. The seasonal variation of th indices tended to be greatest in April, August and at lowest in January. The richness indices was positively correlated with shannon-wiener, evenness indices. The dominance, aggregation indices was negatively correlated with shannon, evenness, richness indices.

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Assessment of genetic diversity and distance of three Cicuta virosa populations in South Korea

  • Nam, Bo Eun;Kim, Jae Geun;Shin, Cha Jeong
    • Journal of Ecology and Environment
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    • v.36 no.3
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    • pp.205-210
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    • 2013
  • Cicuta virosa L. (Apiaceae) is a perennial emergent plant designated as an endangered species in South Korea. According to the former records, only four natural habitats remain in South Korea. A former study suggested that three of four populations (Pyeongchang: PC, Hoengseong: HS, Gunsan: GS) would be classified as different ecotypes based on their different morphological characteristics and life cycle under different environmental conditions. To evaluate this suggestion, we estimated genetic diversity in each population and distance among three populations by random amplification of polymorphic DNA. Seven random primers generated a total of 61 different banding positions, 36 (59%) of them were polymorphic. Nei's gene diversity and the Shannon diversity index increased in the order of PC < HS < GS, which is the same order of population size. In the two-dimensional (2D) plot of first two principal components in principal component analysis with the presence of 61 loci, individuals could be grouped as three populations easily (proportion of variance = 0.6125). Nei's genetic distance for the three populations showed the same tendency with the geographical distance within three populations. And it is also similar to the result of discriminant analysis with the morphological or life-cycle factors from the previous study. From the results, we concluded that three different populations of C. virosa should be classified as ecotypes based on not only morphology and phenology but genetic differences in terms of diversity and distance as well.

Ecological Characteristics and Change for fifteen Years$(1990$\sim2004)$ of Plant Community Structure of the Pinus densiflora S. et Z. Forest in Namsan, Seoul (서울시 남산소나무림 생태적 특성 및 15년간(1990$\sim$2004년) 식생구조 변화분석)

  • Lee Kyong-Jae;Kim Jeong-Ho;Han Bong-Ho
    • Korean Journal of Environment and Ecology
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    • v.19 no.3
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    • pp.312-326
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    • 2005
  • The purpose of this study is to provide data for conservation and ecological management of Pinus densiflora forest by analyzing ecological characteristics and the change of Pin us densiflora community structure for fifteen years in Namsan(Mt.). The actual vegetation of Pinus densiflora forest was divided into total six types and fifteen detail types. According to the results of TWINSPAN analysis of Pinus densiflora forest, there were fourty-four plots(unit: 400 m') and it was classified into five community types. The dominant species were Pinus densiflora in canopy layer, Styrax japonica in the understory layer and Stephanandra incisa with Rhododendron mucronujatum in the shrub layer. The index of shannon's diversity was from 1.5980 to 1.1485 per $400m^2$and the range of species number was from seventeen to twenty-two. As a result of the change of Pin us densinora forest structure, the importance percentage(1.p.) of Pinus densi. nora$(I.P.:\;77.9\%\rightarrow50.6\%) was decreased, Styraxjaponica$(I.P.:\;5.3\%\rightarrow22.6\%), Prunus sargen $(I.P.:\;1.5\%\rightarrow9.2\%) and Stephanandra incisa$(I.P.:\;3.5\%\rightarrow7.7\%) were increased for fifteen years. Based on standard of $2,000m^2$unit area, shannon's diversity changed 1.1719 into 0.8829 and species number changed thirty-four into twenty-one.