• The Plant Pathology Journal
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• v.34 no.5
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• pp.381-392
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• 2018

Clavibacter michiganensis subsp. michiganesis (Cmm) is a quarantine-worthy pest in $M{\acute{e}}xico$. The implementation and validation of new technologies is necessary to reduce the time for bacterial detection in laboratory conditions and Raman spectroscopy is an ambitious technology that has all of the features needed to characterize and identify bacteria. Under controlled conditions a contagion process was induced with Cmm, the disease epidemiology was monitored. Micro-Raman spectroscopy ($532nm\;{\lambda}$ laser) technique was evaluated its performance at assisting on Cmm detection through its characteristic Raman spectrum fingerprint. Our experiment was conducted with tomato plants in a completely randomized block experimental design (13 plants ${\times}$ 4 rows). The Cmm infection was confirmed by 16S rDNA and plants showed symptoms from 48 to 72 h after inoculation, the evolution of the incidence and severity on plant population varied over time and it kept an aggregated spatial pattern. The contagion process reached 79% just 24 days after the epidemic was induced. Micro-Raman spectroscopy proved its speed, efficiency and usefulness as a non-destructive method for the preliminary detection of Cmm. Carotenoid specific bands with wavelengths at 1146 and $1510cm^{-1}$ were the distinguishable markers. Chemometric analyses showed the best performance by the implementation of PCA-LDA supervised classification algorithms applied over Raman spectrum data with 100% of performance in metrics of classifiers (sensitivity, specificity, accuracy, negative and positive predictive value) that allowed us to differentiate Cmm from other endophytic bacteria (Bacillus and Pantoea). The unsupervised KMeans algorithm showed good performance (100, 96, 98, 91 y 100%, respectively).

• The Journal of the Convergence on Culture Technology
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• v.6 no.3
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• pp.457-462
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• 2020

Osteoporosis is a disease that occurs mainly in the elderly and increases the risk of fractures due to structural deterioration of bone mass and tissues. The purpose of this study are to assess the relationship between nutritional components and osteoporosis and to evaluate models for predicting osteoporosis based on nutrient components. In experimental method, association was performed using binary logistic regression, and predictive models were generated using the naive Bayes algorithm and variable subset selection methods. The analysis results for single variables indicated that food intake and vitamin B2 showed the highest value of the area under the receiver operating characteristic curve (AUC) for predicting osteoporosis in men. In women, monounsaturated fatty acids showed the highest AUC value. In prediction model of female osteoporosis, the models generated by the correlation based feature subset and wrapper based variable subset methods showed an AUC value of 0.662. In men, the model by the full variable obtained an AUC of 0.626, and in other male models, the predictive performance was very low in sensitivity and 1-specificity. The results of these studies are expected to be used as the basic information for the treatment and prevention of osteoporosis.

• Journal of the Institute of Electronics Engineers of Korea SC
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• v.48 no.2
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• pp.64-70
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• 2011

Portable artificial electronic nose (E-nose) system suffers from noisy fluctuation in surroundings such as temperature, vapor concentration, and gas flow, because its measuring condition is not controled precisely as in the laboratory. It is important to develop a simple and robust vapor recognition technique applicable to this uncontrolled measurement, especially for the portable measuring and diagnostic system which are expanding its area with the improvements in micro bio sensor technology. This study used a PDA-based portable E-nose to collect the uncontrolled vapor measurement signals, and applied the image matching algorithm developed in the previous study on the measured signal to verify its robustness and improved accuracy in portable vapor recognition. The results showed not only its consistent performance under noisy fluctuation in the portable measurement signal, but also an advanced recognition accuracy for 2 similar vapor species which have been hard to discriminate with the conventional maximum sensitivity feature extraction method. The proposed method can be easily applied to the data processing of the ubiquitous sensor network (USN) which are usually exposed to various operating conditions. Furthermore, it will greatly help to realize portable medical diagnostic and environment monitoring system with its robust performance and high accuracy.

• Geophysics and Geophysical Exploration
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• v.7 no.3
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• pp.207-212
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• 2004

This article reviews recent developments in three-dimensional (3-D) magntotelluric (MT) imaging. The inversion of MT data is fundamentally ill-posed, and therefore the resultant solution is non-unique. A regularizing scheme must be involved to reduce the non-uniqueness while retaining certain a priori information in the solution. The standard approach to nonlinear inversion in geophysis has been the Gauss-Newton method, which solves a sequence of linearized inverse problems. When running to convergence, the algorithm minimizes an objective function over the space of models and in the sense produces an optimal solution of the inverse problem. The general usefulness of iterative, linearized inversion algorithms, however is greatly limited in 3-D MT applications by the requirement of computing the Jacobian(partial derivative, sensitivity) matrix of the forward problem. The difficulty may be relaxed using conjugate gradients(CG) methods. A linear CG technique is used to solve each step of Gauss-Newton iterations incompletely, while the method of nonlinear CG is applied directly to the minimization of the objective function. These CG techniques replace computation of jacobian matrix and solution of a large linear system with computations equivalent to only three forward problems per inversion iteration. Consequently, the algorithms are efficient in computational speed and memory requirement, making 3-D inversion feasible.

• Investigative Magnetic Resonance Imaging
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• v.18 no.4
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• pp.290-302
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• 2014

Purpose : Susceptibility-weighted magnetic resonance (MR) sequence is three-dimensional (3D), spoiled gradient-echo pulse sequences that provide a high sensitivity for the detection of blood degradation products, calcifications, and iron deposits. This pictorial review is aimed at illustrating and discussing its main clinical applications. Materials and Methods: SWI is based on high-resolution, 3D, fully velocity-compensated gradient-echo sequences using both magnitude and phase images. To enhance the visibility of the venous structures, the magnitude images are multiplied with a phase mask generated from the filtered phase data, which are displayed at best after post-processing of the 3D dataset with the minimal intensity projection algorithm. A total of 200 patients underwent MR examinations that included SWI on a 3 tesla MR imager were enrolled. Results: SWI is very useful in detecting multiple brain disorders. Among the 200 patients, 80 showed developmental venous anomaly, 22 showed cavernous malformation, 12 showed calcifications in various conditions, 21 showed cerebrovascular accident with susceptibility vessel sign or microbleeds, 52 showed brain tumors, 2 showed diffuse axonal injury, 3 showed arteriovenous malformation, 5 showed dural arteriovenous fistula, 1 showed moyamoya disease, and 2 showed Parkinson's disease. Conclusion: SWI is useful in detecting occult low flow vascular lesions, calcification and microbleed and characterising diverse brain disorders.

• Journal of the Korea Institute of Information and Communication Engineering
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• v.18 no.4
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• pp.825-832
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• 2014

Previous works for detecting arrhythmia have mostly used nonlinear method such as artificial neural network, fuzzy theory, support vector machine to increase classification accuracy. Most methods require accurate detection of P-QRS-T point, higher computational cost and larger processing time. Even if some methods have the advantage in low complexity, but they generally suffer form low sensitivity. Also, it is difficult to detect PVC accurately because of the various QRS pattern by person's individual difference. Therefore it is necessary to design an efficient algorithm that classifies PVC based on QRS pattern in realtime and decreases computational cost by extracting minimal feature. In this paper, we propose PVC classification based on QRS pattern using QS interval and R wave amplitude. For this purpose, we detected R wave, RR interval, QRS pattern from noise-free ECG signal through the preprocessing method. Also, we classified PVC in realtime through QS interval and R wave amplitude. The performance of R wave detection, PVC classification is evaluated by using 9 record of MIT-BIH arrhythmia database that included over 30 PVC. The achieved scores indicate the average of 99.02% in R wave detection and the rate of 93.72% in PVC classification.

• Korean Journal of Remote Sensing
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• v.35 no.6_1
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• pp.959-971
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• 2019

CNN (Convolutional Neural Network) is one representative deep learning algorithm, which can extract high-level spatial and spectral features, and has been applied for hyperspectral image classification. However, one significant drawback behind the application of CNNs in hyperspectral images is the high dimensionality of the data, which increases the training time and processing complexity. To address this problem, several CNN based hyperspectral image classification studies have exploited PCA (Principal Component Analysis) for dimensionality reduction. One limitation to this is that the spectral information of the original image can be lost through PCA. Although it is clear that the use of PCA affects the accuracy and the CNN training time, the impact of PCA for CNN based hyperspectral image classification has been understudied. The purpose of this study is to analyze the quantitative effect of PCA in CNN for hyperspectral image classification. The hyperspectral images were first transformed through PCA and applied into the CNN model by varying the size of the reduced dimensionality. In addition, 2D-CNN and 3D-CNN frameworks were applied to analyze the sensitivity of the PCA with respect to the convolution kernel in the model. Experimental results were evaluated based on classification accuracy, learning time, variance ratio, and training process. The size of the reduced dimensionality was the most efficient when the explained variance ratio recorded 99.7%~99.8%. Since the 3D kernel had higher classification accuracy in the original-CNN than the PCA-CNN in comparison to the 2D-CNN, the results revealed that the dimensionality reduction was relatively less effective in 3D kernel.

• Korean Journal of Ecology and Environment
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• v.41 no.spc
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• pp.11-20
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• 2008

In this study, we applied a Particle Swarm Optimization (PSO) algorithm to predict the changes of chlorophyll-${\alpha}$ related to environmental factors in agricultural reservoirs in Korean national scale. Data were obtained from water quality monitoring networks of reservoirs operated by the Ministry of Agriculture and Forestry and the Ministry of Environment of Korea. From the database of the monitoring networks, 290 reservoirs were chosen with variables such as chlorophyll-${\alpha}$ and 13 environmental factors (COD, TN, TP, Altitude, Bank height, etc.) measured in 2002. Based on Carlson's trophic status index, reservoirs were divided into five groups, and most agricultural reservoirs $(TSI_{CHL}\;64.1%,\;TSI_{TP}\;75.5%)$ were in the eutrophic states. The groups were discriminated with environmental variables, showing that COD, DO, and TP were important factors to determine the trophic states. MLP-PSO (Multilayer perceptron (MLP) with PSO for the optimization) was applied for the prediction of chlorophyll-${\alpha}$ with environment factors, and showed high predictability (r=0.83, p<0.001). Additionally, the sensitivity analysis of the MLP-PSO model showed that COD had the strongest positive effects on the concentration of chlorophyll-${\alpha}$, and followed by TP, TN, DO, whereas altitude and bank height had negative effects on the concentration of chlorophyll-${\alpha}$.

• Korean Journal of Agricultural and Forest Meteorology
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• v.14 no.4
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• pp.143-154
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• 2012

As demand of water resources and attentions to changes in climate (e.g., due to ENSO) increase, long/short term prediction of precipitation is getting necessary in water planning. This research evaluated the ability of MM5 to predict precipitation in the Tampa Bay region over 23 year period from 1986 to 2008. Additionally MM5 results were statistically bias-corrected using observation data at 33 stations over the study area using CDF-mapping approach and evaluated comparing to raw results for each ENSO phase (i.e., El Ni$\tilde{n}$o and La Ni$\tilde{n}$a). The bias-corrected model results accurately reproduced the monthly mean point precipitation values. Areal average daily/monthly precipitation predictions estimated using block-kriging algorithm showed fairly high accuracy with mean error of daily precipitation, 0.8 mm and mean error of monthly precipitation, 7.1 mm. The results evaluated according to ENSO phase showed that the accuracy in model output varies with the seasons and ENSO phases. Reasons for low predictions skills and alternatives for simulation improvement are discussed. A comprehensive evaluation including sensitivity to physics schemes, boundary conditions reanalysis products and updating land use maps is suggested to enhance model performance. We believe that the outcome of this research guides to a better implementation of regional climate modeling tools in water management at regional/seasonal scale.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.37 no.6C
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• pp.476-482
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• 2012

In this paper, we analyze and compare several co-channel interference mitigation algorithms for WBAN application in 2.4 GHz ISM frequency bands. ML (Maximum Likelihood), OC (Optimal Combining) and MMSE (Minimum Mean Square Error) has been considered for the possible techniques for interference cancellation in view of the trade off between the performance and the complexity of implementation. Based on the channel model of IEEE 802.15.6 standard, simulation results show that ML and OC attains the lower BER performance than that of MMSE if we assume the perfect channel estimation. But, ML and OC have the additional requirement of implementation for his own and other users's channel estimation process, hence, besides the BER performance, the complexity of implementation and the sensitivity to channel estimation error should be considered since it requires the simple and small sized equipment for WBAN system application. In addition, the gap of detection BER performance between ML, OC and MMSE is much decreased under the imperfect channel estimation if we adopt real channel estimation process, therefore, in order to apply to WBAN system, the trade off between the BER performance and complexity of implemetation should be seriously considered to decide the best co-channel interference cancellation for WBAN system application.