• 제목/요약/키워드: Semiautomatic segmentation

검색결과 17건 처리시간 0.022초

흉부 X선 영상에서의 전역 및 지역 특성을 고려한 폐 영역 분할 연구 (Lung Segmentation Considering Global and Local Properties in Chest X-ray Images)

  • 전웅기;김태윤;김성준;최흥국;김광기
    • 한국멀티미디어학회논문지
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    • 제16권7호
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    • pp.829-840
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    • 2013
  • 본 논문은 흉부 X-선 기반으로 전역적 특성을 고려한 1차 영역 분할과 지역적 특성을 고려한 2차 영역 분할을 결합한 폐 영역 분할 방법을 제안한다. 1차 영역 분할은 랜드마크 기반의 학습 데이터를 사용하여 생성한 모델을 기반으로 일정 형태를 유지하며 경계선을 탐색하는 능동 형태 모델을 적용하였다. 2차 영역 분할은 국부 영역에 대하여 에너지를 산출하고 에너지가 최소가 되는 윤곽선을 탐색하는 국부 영역 기반 윤곽 모델을 사용하였다. 마지막으로 정확도를 평가하기 위해 5장의 영상을 전문가가 수동으로 분할한 영역과 제안한 방법을 통해 분할된 영역의 결과에 대한 다이스 계수를 계산하였으며, 유사도는 $95.33%{\pm}0.93%$로 나타났다. 효과적인 영상 분할 방법은 흉부 x-ray 영상에서 더 정확한 초기 진단과 예후 추정을 위한 컴퓨터 보조 진단 시스템의 개발에 필수적인 요소가 될 것으로 기대한다.

상호작용 기반 3차원 비강 모델 분할 및 가시화 (Airflow visualization and an interactive method for segmentation of 3D nasal airway)

  • 서안나;허고은;김성균;김지인
    • 한국정보과학회:학술대회논문집
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    • 한국정보과학회 2012년도 한국컴퓨터종합학술대회논문집 Vol.39 No.1(C)
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    • pp.320-322
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    • 2012
  • 코 내부의 복잡한 기하학적 형상으로 인해 nasal airway의 분리는 많은 어려움을 겪고 있다. 본 논문은 velocimetry of nasal airflow 와 코 수술 계획을 위하여 3차원 공간에서 nasal airway를 interactive semiautomatic으로 분리하고 시각화하는 방법을 제안한다. 제안하는 방법은 ROI(Region-Of-Interest)와 multi-seed 3d region growing(MS3RG)기법을 적용하여 비강을 분리하며 볼륨렌더링 기법을 이용하여 분리된 영역을 3차원 공간에서 직관적으로 확인 할 수 있다. 또한 분리된 3차원 비강 모델은 유동흐름 실험을 위하여 3차원 프린터를 통해 실제 모형으로 제작 가능하다. 그리하여 CT dataset(512*512*175)을 가지고 매뉴얼 세그멘테이션에서 5시간 정도 걸리던 작업을 반자동 세그멘테이션 방법을 이용할 경우 최대 3분 이내에 분리 작업을 완료할 수 있으며 수치해석 실험 및 물리 실험에 이용할 수 있다.

Bilateral and pseudobilateral tonsilloliths: Three dimensional imaging with cone-beam computed tomography

  • Misirlioglu, Melda;Nalcaci, Rana;Adisen, Mehmet Zahit;Yardimci, Selmi
    • Imaging Science in Dentistry
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    • 제43권3호
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    • pp.163-169
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    • 2013
  • Purpose: Tonsilloliths are calcifications found in the crypts of the palatal tonsils and can be detected on routine panoramic examinations. This study was performed to highlight the benefits of cone-beam computed tomography (CBCT) in the diagnosis of tonsilloliths appearing bilaterally on panoramic radiographs. Materials and Methods: The sample group consisted of 7 patients who had bilateral radiopaque lesions at the area of the ascending ramus on panoramic radiographs. CBCT images for every patient were obtained from both sides of the jaw to determine the exact locations of the lesions and to rule out other calcifications. The calcifications were evaluated on the CBCT images using Ez3D2009 software. Additionally, the obtained images in DICOM format were transferred to ITK SNAP 2.4.0 pc software for semiautomatic segmentation. Segmentation was performed using contrast differences between the soft tissues and calcifications on grayscale images, and the volume in mm3 of the segmented three dimensional models were obtained. Results: CBCT scans revealed that what appeared on panoramic radiographs as bilateral images were in fact unilateral lesions in 2 cases. The total volume of the calcifications ranged from 7.92 to $302.5mm^3$. The patients with bilaterally multiple and large calcifications were found to be symptomatic. Conclusion: The cases provided the evidence that tonsilloliths should be considered in the differential diagnosis of radiopaque masses involving the mandibular ramus, and they highlight the need for a CBCT scan to differentiate pseudo- or ghost images from true bilateral pathologies.

간과 비장의 체적을 구하기 위한 3차원 영역 확장 기반 자동 영상 분할 알고리즘의 동물팬텀을 이용한 성능검증 (Evaluation of Automatic Image Segmentation for 3D Volume Measurement of Liver and Spleen Based on 3D Region-growing Algorithm using Animal Phantom)

  • 김진성;조준식;신경숙;김진환;전호상;조규성
    • 한국의학물리학회지:의학물리
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    • 제19권3호
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    • pp.178-185
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    • 2008
  • 간경변 및간암 환자의 증가로 간이식술의 필요성이 점점 증가되고 있고, 특히 공여자의 생체 간이식은 간이식술의 주된 분야를 차지하고 있으며 간이식 수술 전 공여자에서 간체적의 정확한 측정은 수술 후 공여자와 수여자의 간기능을 예측하는데 있어 중요한 자료가 되며, 성공적인 수술과 환자의 예후에 밀접한 영향을 미친다. 그러나 현재 환자의 간체적을 구하는 과정은 환자의 모든 CT 영상위의 간을 수작업을 통해 영상분할한 후에 3차원 간체적을 구하고 있으며 많은 시간과 노력이 필요한 작업이다. 이러한 문제를 해결하기 위해서 본 논문에서는 자동으로 간과 비장을 문턱값처리, 형태학적 영상처리, 3차원 영역확장법등의 기법을 이용하여 분할하는 알고리즘을 개발하여 체적을 구하는 시간을 단축하였다. 이러한 알고리즘의 정확성을 평가하기 위해서 동물의 실제 간과 비장을 팬텀으로 제작하여 실제 측정한 체적과 알고리즘으로 분할된 영상의 결과를 비교 평가하였다. 문턱치값의 설정에 따라 다른 결과를 보이는 특성이 있지만 자동으로 문턱치를 결정했을 때 비장과 간의 체적측정 오차는 9.27%, -4.52%이었으며, 수동으로 문턱치를 결정했을 때 최소 오차가 각각 0.2%, 0.17%의 결과를 보였다. 이러한 팬텀 연구를 통해 자동 분할 알고리즘으로 얻은 체적의 결과가 정확성과 재현성을 보여주어 추후 간체적을 구하는 보조수단으로 활용될 수 있을 것이라 예상된다.

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Intra-Rater and Inter-Rater Reliability of Brain Surface Intensity Model (BSIM)-Based Cortical Thickness Analysis Using 3T MRI

  • Jeon, Ji Young;Moon, Won-Jin;Moon, Yeon-Sil;Han, Seol-Heui
    • Investigative Magnetic Resonance Imaging
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    • 제19권3호
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    • pp.168-177
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    • 2015
  • Purpose: Brain surface intensity model (BSIM)-based cortical thickness analysis does not require complicated 3D segmentation of brain gray/white matters. Instead, this technique uses the local intensity profile to compute cortical thickness. The aim of the present study was to evaluate intra-rater and inter-rater reliability of BSIM-based cortical thickness analysis using images from elderly participants. Materials and Methods: Fifteen healthy elderly participants (ages, 55-84 years) were included in this study. High-resolution 3D T1-spoiled gradient recalled-echo (SPGR) images were obtained using 3T MRI. BSIM-based processing steps included an inhomogeneity correction, intensity normalization, skull stripping, atlas registration, extraction of intensity profiles, and calculation of cortical thickness. Processing steps were automatic, with the exception of semiautomatic skull stripping. Individual cortical thicknesses were compared to a database indicating mean cortical thickness of healthy adults, in order to produce Z-score thinning maps. Intra-class correlation coefficients (ICCs) were calculated in order to evaluate inter-rater and intra-rater reliabilities. Results: ICCs for intra-rater reliability were excellent, ranging from 0.751-0.940 in brain regions except the right occipital, left anterior cingulate, and left and right cerebellum (ICCs = 0.65-0.741). Although ICCs for inter-rater reliability were fair to excellent in most regions, poor inter-rater correlations were observed for the cingulate and occipital regions. Processing time, including manual skull stripping, was $17.07{\pm}3.43min$. Z-score maps for all participants indicated that cortical thicknesses were not significantly different from those in the comparison databases of healthy adults. Conclusion: BSIM-based cortical thickness measurements provide acceptable intra-rater and inter-rater reliability. We therefore suggest BSIM-based cortical thickness analysis as an adjunct clinical tool to detect cortical atrophy.

Application of Volumetric Analysis to Glioblastomas: a Correlation Study on the Status of the Isocitrate Dehydrogenase Mutation

  • Bae, Seon Yong;Park, Chul-Kee;Kim, Tae Min;Park, Sung-Hye;Kim, Il Han;Choi, Seung Hong
    • Investigative Magnetic Resonance Imaging
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    • 제19권4호
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    • pp.218-223
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    • 2015
  • Purpose: To investigate whether volumetric analysis based on T2WI and contrast-enhanced (CE) T1WI can distinguish between isocitrate dehydrogenase-1 mutation-positive ($IDH1^P$) and -negative ($IDH1^N$) glioblastomas (GBMs). Materials and Methods: We retrospectively enrolled 109 patients with histopathologically proven GBMs after surgery or stereotactic biopsy and preoperative MR imaging. We measured the whole-tumor volume in each patient using a semiautomatic segmentation method based on both T2WI and CE T1WI. We compared the tumor volumes between $IDH1^P$ (n = 12) and $IDH1^N$ (n = 97) GBMs using an unpaired t-test. In addition, we performed receiver operating characteristic (ROC) analysis for the differentiation of $IDH1^P$ and $IDH1^N$ GBMs using the tumor volumes based on T2WI and CE T1WI. Results: The mean tumor volume based on T2WI was larger for $IDH1^P$ GBMs than $IDH1^N$ GBMs ($108.8{\pm}68.1$ and $59.3{\pm}37.3mm^3$, respectively, P = 0.0002). In addition, $IDH1^P$ GBMs had a larger tumor volume on CE T1WI than did $IDH1^N$ tumors ($49.00{\pm}40.14$ and $22.53{\pm}17.51mm^3$, respectively, P < 0.0001). ROC analysis revealed that the tumor volume based on T2WI could distinguish $IDH1^P$ from $IDH1^N$ with a cutoff value of 90.25 (P < 0.05): 7 of 12 $IDH1^P$ (58.3%) and 79 of 97 $IDH1^N$ (81.4%). Conclusion: Volumetric analysis of T2WI and CE T1WI could enable $IDH1^P$ GBMs to be distinguished from $IDH1^N$ GBMs. We assumed that secondary GBMs with $IDH1^P$ underwent stepwise progression and were more infiltrative than those with $IDH1^N$, which might have resulted in the differences in tumor volume.

Volume and Mass Doubling Time of Lung Adenocarcinoma according to WHO Histologic Classification

  • Jung Hee Hong;Samina Park;Hyungjin Kim;Jin Mo Goo;In Kyu Park;Chang Hyun Kang;Young Tae Kim;Soon Ho Yoon
    • Korean Journal of Radiology
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    • 제22권3호
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    • pp.464-475
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    • 2021
  • Objective: This study aimed to evaluate the tumor doubling time of invasive lung adenocarcinoma according to the International Association of the Study for Lung Cancer (IASLC)/American Thoracic Society (ATS)/European Respiratory Society (ERS) histologic classification. Materials and Methods: Among the 2905 patients with surgically resected lung adenocarcinoma, we retrospectively included 172 patients (mean age, 65.6 ± 9.0 years) who had paired thin-section non-contrast chest computed tomography (CT) scans at least 84 days apart with the same CT parameters, along with 10 patients with squamous cell carcinoma (mean age, 70.9 ± 7.4 years) for comparison. Three-dimensional semiautomatic segmentation of nodules was performed to calculate the volume doubling time (VDT), mass doubling time (MDT), and specific growth rate (SGR) of volume and mass. Multivariate linear regression, one-way analysis of variance, and receiver operating characteristic curve analyses were performed. Results: The median VDT and MDT of lung cancers were as follows: acinar, 603.2 and 639.5 days; lepidic, 1140.6 and 970.1 days; solid/micropapillary, 232.7 and 221.8 days; papillary, 599.0 and 624.3 days; invasive mucinous, 440.7 and 438.2 days; and squamous cell carcinoma, 149.1 and 146.1 days, respectively. The adjusted SGR of volume and mass of the solid-/micropapillary-predominant subtypes were significantly shorter than those of the acinar-, lepidic-, and papillary-predominant subtypes. The histologic subtype was independently associated with tumor doubling time. A VDT of 465.2 days and an MDT of 437.5 days yielded areas under the curve of 0.791 and 0.795, respectively, for distinguishing solid-/micropapillary-predominant subtypes from other subtypes of lung adenocarcinoma. Conclusion: The tumor doubling time of invasive lung adenocarcinoma differed according to the IASCL/ATS/ERS histologic classification.