• 제목/요약/키워드: SPECIFIC DIVERSITY

검색결과 710건 처리시간 0.023초

Diversity in Six Goat Populations in the Middle and Lower Yangtze River Valley

  • Jiang, X.P.;Liu, G.Q.;Ding, J.T.;Yang, L.G.;Cao, S.X.;Cheng, S.O.
    • Asian-Australasian Journal of Animal Sciences
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    • 제16권2호
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    • pp.277-281
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    • 2003
  • Amplified fragment length polymorphism (AFLPs) markers were used to investigate the genetic variation in six autochthonous goat populations distributed in the middle and lower Yangtze River valley. The goat populations were Chengdu Grey Goat (CGG), Chuandong White Goat (CWG), Banjiao Goat (BG), Matou Goat (MG), Hui Goat (HG) and Yangtze River Delta White Goat (YRDWG). A total of 180 individuals (30 per population) were analysed using ten selected AFLP primer combinations that produced 78 clear polymorphism loci. The variability at AFLP loci was largely maintained within populations, as indicated by the average genetic similarity, and they were ranged from 0.745 to 0.758 within populations and 0.951 to 0.970 between populations. No breed specific markers were identified. Cluster analysis based on Nei' genetic distance between populations indicated that Chengdu Grey Goat is the most distant population, while CWG and YROWG were the closest populations, followed by BG, HG and MG. Genetic diversity of the goat populations didn' confirm what was expected on the basis of their geographical location, which may reflect undocumented migrations and gene flows and identify an original genetic resource.

Comparative Analysis of Chloroplast Genome of Dysphania ambrosioides (L.) Mosyakin & Clemants Understanding Phylogenetic Relationship in Genus Dysphania R. Br.

  • Kim, Yongsung;Park, Jongsun;Chung, Youngjae
    • 한국자원식물학회지
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    • 제32권6호
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    • pp.644-668
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    • 2019
  • Dysphania ambrosioides (L.) Mosyakin & Clemants which belongs to Chenopodiaceae/Amaranthaceae sensu in APG system has been known as a useful plant in various fields as well as an invasive species spreading all over the world. To understand its phylogenetic relationship with neighbour species, we completed chloroplast genome of D. ambrosioides collected in Korea. Its length is 151,689 bp consisting of four sub-regions: 83,421 bp of large single copy (LSC) and 18,062 bp of small single copy (SSC) regions are separated by 25,103 bp of inverted repeat (IR) regions. 128 genes (84 protein-coding genes, eight rRNAs, and 36 tRNAs) were annotated. The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC and IR regions are 34.9%, 30.3%, and 42.7%, respectively. Distribution of simple sequence repeats are similar to those of the other two Dysphania chloroplasts; however, different features can be utilized for population genetics. Nucleotide diversity of Dysphania chloroplast genomes 18 genes including two ribosomal RNAs contains high nucleotide diversity peaks, which may be genus or species-specific manner. Phylogenetic tree presents that D. ambrosioides occupied a basal position in genus Dysphania and phylogenetic relation of tribe level is presented clearly with complete chloroplast genomes.

동남아시아 토속주거의 특성에 관한 연구 - 공통성과 다양성을 중심으로 - (A Study on the Vernacular House in Southeast Asia - In the Aspect of Commonality and Diversity -)

  • 주서령;김민경
    • 한국주거학회논문집
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    • 제21권6호
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    • pp.19-29
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    • 2010
  • Vernacular houses in Southeast Asia are basically post and beam structures raised on pillars, with gabled roofs. They were designed and built by the people themselves to meet specific needs, accommodating the values, economies and ways of life of cultures that produce them. Their forms and housing cultures are very various according to the country and the region. But based on the common history and culture, the vernacular houses in Southeast definitely have commonality. The purpose of this study is to analyse the commonality and diversity of the vernacular houses in Southeast Asia in the aspect of two different perspectives. One is the climate perspective, for which the analysis was made on the primary characteristics such as the climate, material, structure of the vernacular houses. The other one is the social-cultural perspective which try to find the religion, belief, life style and social and family relationship which controlled the forms of the housing under the surface. As a result, this study summarise and find the outstanding and unique meaning and definition of the vernacular houses in Southeast Asia.

Seed Purity Test and Genetic Diversity Evaluation Using RAPD Markers in Radish (Raphanus sativus L.)

  • Huh, Man-Kyu;Choi, Joo-Soo
    • 한국작물학회지
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    • 제54권4호
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    • pp.346-350
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    • 2009
  • The cultivated radish (Raphanus sativus L.) is a major vegetable crop in the world wide and fast-growing species that grows inhabitats of six continents. It is very important to determine hybrid seed purity in the production of hybrid Brassica vegetable seeds to avoid unacceptable contamination with self-inbred (sib) seeds. The use of random amplified polymorphic DNA (RAPD) markers for evaluating seed purity in $F_2$-hybrid radish cultivars demonstrated. One hundred eighty seeds from the F1 male and female harvest were subsequently screened for seed purity using 13 primers. The 13 primers result in 17 cultivar-specific bands and 23 variable RAPD bands scored for cultivar. RAPD analysis of hybrid seeds from the harvest revealed 128 seeds tested except underdevelopment and decayed seeds were sibs. Especially, $F_2$ hybrids of radish, OPC13, OPD20 were presented clear hybrid bands. It maintains higher than average level of genetic diversity compared with their correspondent parents. RAPD amplification of DNA extracted from germinated individuals from the female harvest reveal that 10 of 208 seeds tested were self-inbred (4.8%). RAPD analysis of hybrid seeds from the male harvest revealed 7 of the 208 seeds tested were sibs (3.4%). The RAPD may lead to a better insight in to the hybrid seed purity.

Design of a Miniaturized High-Isolation Diversity Antenna for Wearable WBAN Applications

  • Kim, Seongjin;Kwon, Kyeol;Choi, Jaehoon
    • Journal of electromagnetic engineering and science
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    • 제13권1호
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    • pp.28-33
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    • 2013
  • This paper proposes a miniaturized high-isolation diversity antenna for wearable wireless body area network (WBAN) applications. An inverted-F type radiating element is used to reduce the overall dimension of the proposed antenna to $30mm{\times}30mm{\times}2.5mm$. The antenna performance on the human body phantom is analyzed through simulation and the performance of the fabricated antenna is verified by comparing the measured data with that of the simulation when the antenna is placed on a semi-solid flat phantom with equivalent electrical properties of a human body. The fabricated antenna has a 10 dB return loss bandwidth over the Industrial Scientific Medical (ISM) band from 2.35 GHz to 2.71 GHz and isolation is higher than 28 dB at 2.45 GHz. The measured peak gain of antenna elements # 1 and # 2 is -0.43 dBi and -0.54 dBi, respectively. Performance parameters are analyzed, including envelope correlation coefficient (ECC), mean effective gain (MEG), and the MEG ratio. In addition, the specific absorption ratio (SAR) distributions of the proposed antenna are measured for consideration in use.

Niche partitioning of picocyanobacterial lineages in the oligotrophic northwestern Pacific Ocean

  • Choi, Dong Han;Selph, Karen E.;Noh, Jae Hoon
    • ALGAE
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    • 제30권3호
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    • pp.223-232
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    • 2015
  • More than 20 and 10 clades / ecotypes of Synechococcus and Prochlorococcus, respectively, have been identified in various oceanic regions. However, their diversity has yet to be thoroughly studied in the northwest Pacific Ocean. Further, spatial distribution of Synechococcus clades in the oligotrophic oceans has been scarcely characterized. To elucidate picocyanobacterial lineage distribution in the northwest Pacific Ocean, 16S-23S internal transcribed spacer sequences of picocyanobacteria were sequenced by barcoded amplicon pyrosequencing method. Additional pyrosequencing library using a primer specific for the Synechococcus subcluster-5.1 was constructed to thoroughly understand Synechococcus diversity in the oligotrophic oceans. In warm pool area, Prochlorococcus was predominant and showed a distinct depthpartitioning between HLII and LL ecotypes. Despite low abundances, diverse Synechococcus clades appeared in the oligotrophic open ocean, showing both vertical and horizontal niche partitioning. Clade II was the predominant Synechococcus clade, especially in upper euphotic depths. In shallow and middle euphotic depths, clades UC-A, III, and CRD1 were distributed broadly. However, a distinct shift in the horizontal distribution was found at ca. $20^{\circ}N$. Conversely, clades XVII and CRD2 dominated at deep euphotic depths and constituted a higher proportion than clade II. These niche-partitioning of Synechococcus clades seemed to be related with temperature, nutrient concentration as well as iron concentration.

Molecular Characterization of Selected Local and Exotic Cattle Using RAPD Marker

  • Khatun, M. Mahfuza;Hossain, Khondoker Moazzem;Rahman, S.M. Mahbubur
    • Asian-Australasian Journal of Animal Sciences
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    • 제25권6호
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    • pp.751-757
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    • 2012
  • In order to develop specific genetic markers and determine the genetic diversity of Bangladeshi native cattle (Pabna, Red Chittagong) and exotic breeds (Sahiwal), randomly amplified polymorphic DNA (RAPD) analysis was performed using 12 primers. Genomic DNA was extracted from 20 cattle (local and exotic) blood samples and extracted DNA was observed by gel electrophoresis. Among the random primers three were matched and found to be polymorphic. Genetic relations between cattle's were determined by RAPD polymorphisms from a total of 66.67%. Statistical analysis of the data, estimating the genetic distances between cattle and sketching the cluster trees were estimated by using MEGA 5.05 software. Comparatively highest genetic distance (0.834) was found between RCC-82 and SL-623. The lowest genetic distance (0.031) was observed between M-1222 and M-5730. The genetic diversity of Red Chittagong and Sahiwal cattle was relatively higher for a prescribed breed. Adequate diversity in performance and adaptability can be exploited from the study results for actual improvement accruing to conservation and development of indigenous cattle resources.

흰개미 서식처의 미생물 다양성 및 특이성 (Diversity and specificity of soil microorganism isolated from termite nest)

  • 홍진영;김영희;조창욱;김수지;이정민;정소영
    • 보존과학연구
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    • 통권37호
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    • pp.5-15
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    • 2016
  • 국내 목조문화재의 흰개미 피해는 토양과 인접한 건축물의 기둥하부에 주로 발생하지만 흰개미의 유입은 주변 야산의 부후된 목재나 수목 제거 후 남겨진 그루터기에 서식하는 흰개미가 인접한 건물로 유입되어 발생하게 된다. 본 연구는 목조문화재 생물피해 조사에서 흰개미 서식이 확인된 그루터기를 제거하면서 수거된 보은 법주사, 여수 흥국사, 그리고 보성 이용우 가옥의 그루터기와 주변 토양으로부터 미생물을 분리하였다. 그 결과, 세균의 분포 비율이 높았고 지역에 따라 세균 군집에 명확한 차이를 보였으며, 특히 보성 이용우 가옥 내 토양에서 다양한 세균이 다량 분포하는 것으로 나타났다.

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Diversity and Saline Resistance of Endophytic Fungi Associated with Pinus thunbergii in Coastal Shelterbelts of Korea

  • Min, Young Ju;Park, Myung Soo;Fong, Jonathan J.;Quan, Ying;Jung, Sungcheol;Lim, Young Woon
    • Journal of Microbiology and Biotechnology
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    • 제24권3호
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    • pp.324-333
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    • 2014
  • The Black Pine, Pinus thunbergii, is widely distributed along the eastern coast of Korea and its importance as a shelterbelt was highlighted after tsunamis in Indonesia and Japan. The root endophytic diversity of P. thunbergii was investigated in three coastal regions; Goseong, Uljin, and Busan. Fungi were isolated from the root tips, and growth rates of pure cultures were measured and compared between PDA with and without 3% NaCl to determine their saline resistance. A total of 259 isolates were divided into 136 morphotypes, of which internal transcribed spacer region sequences identified 58 species. Representatives of each major fungi phylum were present: 44 Ascomycota, 8 Zygomycota, and 6 Basidiomycota. Eighteen species exhibited saline resistance, many of which were Penicillium and Trichoderma species. Shoreline habitats harbored higher saline-tolerant endophytic diversity compared with inland sites. This investigation indicates that endophytes of P. thunbergii living closer to the coast may have higher resistance to salinity and potentially have specific relationships with P. thunbergii.

Kelps in Korea: from population structure to aquaculture to potential carbon sequestration

  • Hwang, Eun Kyoung;Boo, Ga Hun;Graf, Louis;Yarish, Charles;Yoon, Hwan Su;Kim, Jang Kyun
    • ALGAE
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    • 제37권2호
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    • pp.85-103
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    • 2022
  • Korea is one of the most advanced countries in kelp aquaculture. The brown algae, Undaria pinnatifida and Saccharina japonica are major aquaculture species and have been principally utilized for human food and abalone feed in Korea. This review discusses the diversity, population structure and genomics of kelps. In addition, we have introduced new cultivar development efforts considering climate change, and potential carbon sequestration of kelp aquaculture in Korea. U. pinnatifida showed high diversity within the natural populations but reduced genetic diversity in cultivars. However, very few studies of S. japonica have been conducted in terms of population structure. Since studies on cultivar development began in early 2000s, five U. pinnatifida and one S. japonica varieties have been registered to the International Union for the Protection of New Varieties of Plants (UPOV). To meet the demands for seaweed biomass in various industries, more cultivars should be developed with specific traits to meet application demands. Additionally, cultivation technologies should be diversified, such as integrated multi-trophic aquaculture (IMTA) and offshore aquaculture, to achieve environmental and economic sustainability. These kelps are anticipated to be important sources of blue carbon in Korea.