• Title/Summary/Keyword: SPECIES TRAITS

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Multivariate Analysis of Agronomic Characteristics of Wheat (Triticum spp.) Germplasm

  • Pilmo Sung;Mesfin Haile Kebede;Seung-Bum Lee;Eunae Yoo;Gyu-Taek Cho;Nayoung Ro
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2022.10a
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    • pp.303-303
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    • 2022
  • The purpose of this study was to evaluate agronomic characteristics and identify the useful traits to utilize the wheat genetic resources for breeding programs by understanding the phenotypic variation among germplasm through multivariate analysis. In this study, a total of 394 wheat accessions were characterized for 15 agronomic traits using the National Agrobiodiversity Center (NAC) descriptor list, of which 31 accessions from 6 species and 363 unidentified accession (Triticum spp.) available at the NAC, Rural Development Administration (RDA), Korea. Growth characteristics such as leaf width, culm length, spike length, spikelet length, solid stemmed, days to heading, days to maturity, grain-filing period, and also seed characteristics such as width, height, area, perimeter, circle, solidity, and germination percent were studied. Among the 15 agronomic characteristics, the germination percent showed the smallest variation between resources (CV = 0.4%), and the spikelet length (CV = 66.5%) showed the highest variation. A strong positive correlation was found between seed traits such as seed height and seed area (r = 0.90), seed height and seed perimeter (r = 0.87) and seed length and width (r = 0.80). Principal component analysis (PCA) was conducted and the first five principal components comprised 76.7% of the total variance. Among the first five PCs, PCI accounted for 28.5% and PC2 for 20.0%. Wheat resources (394) were classified into four clusters based on cluster analysis, consisting of 215 resources(I), 117 resources(II), 48 resources(III), and 14 resources(IV). Among the clusters, the resources belonging to Cluster III showed the lowest seed width, height, area, and perimeter characteristics compared to other clusters. The wheat resources belonging to cluster IV had small seed width and low germination percent, but took longer to form heads and mature than resources in other clusters. These results will serve as the basis for further genetic diversity studies, and important agronomic characteristics will be used for improving wheat, including developing high-yielding and resistant varieties to biotic and abiotic stresses via breeding programs.

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Analysis of Functional Traits of Non-woody Native and Naturalized Plant Species Living in a Riparian Park Area near the Hapcheon-Changyeong Weir in Nakdong River (낙동강 합천창녕보 주변 습지공원지역에 서식하는 자생 초본식물과 귀화 초본식물의 기능 형질 분석)

  • Son, Min-Jeong;Nam, Ki-Jung
    • Korean Journal of Ecology and Environment
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    • v.54 no.4
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    • pp.327-333
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    • 2021
  • The two main hypotheses that explain why invasive alien plants successfully colonize new environments are: 1) invasive alien plants are functionally different from native plants in a community, and 2) the plants can adapt well to new environments because they are functionally similar to native plants. The present study investigated the functional traits of naturalized alien herbaceous plants and their native neighbors in a riparian park area near the Hapcheon-Changyeong weir along the Nakdong River to determine which of the two hypotheses applied to the study area. According to the results, leaf functional traits, such as leaf area, specific leaf area, leaf thickness, leaf dry matter content, leaf nitrogen content, and leaf carbon content differed between naturalized alien and native plants, which could be attributed to the higher leaf nitrogen contents in naturalized alien plants than in native plants. The high leaf nitrogen contents are associated with high photosynthetic rates, which lead to effective resource use and rapid growth; therefore, naturalized alien plants growing in the study area were considered to have such functional traits. The results of the present study support the hypothesis that the successful establishment of invasive alien plants is attributed to the functional trait differences between invasive and native plants.

Subfertility in Males: An Important Cause of Bull Disposal in Bovines

  • Mukhopadhyay, C.S.;Gupta, A.K.;Yadav, B.R.;Khate, K.;Raina, V.S.;Mohanty, T.K.;Dubey, P.P.
    • Asian-Australasian Journal of Animal Sciences
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    • v.23 no.4
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    • pp.450-455
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    • 2010
  • The study had two objectives, namely, to estimate the andrological disorders leading to disposal of Karan Fries (KF), Sahiwal cattle and Murrah buffalo bulls and to study the effect of various factors (species/breeds, season of birth and period of birth) on male reproductive parameters. Records on occurrence of subfertility problems and disposal pattern of bulls maintained at the National Dairy Research Institute herd were collected for 15 years (1991 to 2005). Percentage of bulls producing freezable semen was less in the crossbred cattle (58.46%) as compared to Sahiwal (81.69%) and Murrah bulls (81.05%). Various subfertility traits like poor libido and unacceptable seminal profile were found to be the significant reasons (p<0.01) for culling of the breeding bulls. Inadequate sex drive was the main contributing factor for bull disposal in Sahiwal (22.55%) and Murrah bulls (15.12%) whereas poor semen quality and freezability were most frequently observed in KF bulls (24.29 and 7.29 percent, respectively). Least squares analyses of different male reproductive parameters showed that species/breeds had significant effect (p<0.05) on all traits except for frozen semen production periods (FSPP). Periods of birth were significantly different (p<0.05) for all traits except for semen volume. Age at first semen collection (AFSC), age at first semen freezing (AFSF) and age at disposal (AD) were highest in Murrah, while frozen semen production period (FSPP) and semen production period (SPP) were highest in KF and lowest in Sahiwal. The age at first semen donation and breeding period could be reduced by introducing the bulls to training at an early age. These results revealed a declining trend in AFSC, AFSF, FSPP, SPP and AD, thereby indicating an improvement in reproductive performance over the years. The age at first semen donation in bovines can be reduced by introducing the young male calves to training at an early age, which could increase the dosage of semen obtained from each male.

Genetic and morphological divergence of Euphorbia esula and E. maackii in Korea (Euphorbiaceae) (한국산 흰대극(Euphorbia esula)과 섬흰대극(E. maackii)의 유전적, 형태적 분화)

  • Jung, Han-Jin;Park, Ki-Ryong
    • Korean Journal of Plant Taxonomy
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    • v.42 no.4
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    • pp.267-274
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    • 2012
  • To understand morphological and genetic differentiation between Euphorbia esula and E. maackii we examined 12 morphological characters and 11 isozyme loci from 14 populations of two species. Species of E. esula complex (A = 1.63, P = 44.83, $H_e$ = 0.198) in Korea maintain nearly as high as the genetic diversity reported in East Asian E. jolkinii and E. fauriei while lower than those of E. ebracteolata and E. pekinensis in Korea. Although the ranges of most morphological character variation of the two species overlap, E. esula and E. maackii were well recognized by the combination of the morphological traits, and the result of UPGMA phenogram supports the two distinct species inhibited in Korea. However, isozyme data do not support the recognition of E. esula and E. maackii. The discordance between morphological and allozyme data should be explained by the recent divergence or gene flow via introgressive hybridization between two species.

Early Vegetation Succession in Abandoned Field in Cheju Island (제주도 저지대 묵밭 식물군락의 2차 천이)

  • 유영한;이창석
    • The Korean Journal of Ecology
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    • v.26 no.4
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    • pp.209-214
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    • 2003
  • In order to clarify the successional trend and its characteristics of plant community in abandoned field in Cheju Island, we investigated the seral changes of vegetation height, coverage, growth form, species richness, diversity and dominance index along with the time lapse, and then compared with those of mainland researches. And in order to seek the overall trend of vegetation changes, we used cluster, TWINSPAN and PCA ordination techniques. The succession was characterized by the lower species number, lower vegetation height, longer period of herb dominant and later invasion of tree species. These results may come from that ecological traits of Cheju Island itself, and ecosystem fragmented influences that block a seed (propagule) transport. Sere of the dominant species was shown as follows: Mazus japonicus(0.5∼1 years)→Conyza sumatrensis (2 years)→Artemisia princeps var. orientalis(4 years)→Artemisia princeps var. orientalis, indigofera pseudotinctoria(5 years)→Rosa multiflora, Miscanthus sinensis, etc.(8 years)→Miscanthus sinensis(12 years)→Boehmeria nivea, Pueraria thunbergiana etc.(15 years)→Mallotus japonicus(20 years)→Litsea japonica, Machilus thunbergii (20 years<). Abandoned fields were classified into three groups according to time lapse; earlier stage(0∼1 years), middle stage(2∼8 years) and later stage(8∼20 years).

Diversity of Endophytic Fungi Isolated from Pinus densiflora and Larix kaempferi in Mt. Oser, Korea (충남 오서산에 분포하는 소나무와 일본잎갈나무에서 분리한 내생균의 다양성)

  • Eo, Ju-Kyeong;Kim, Chang-Kyun;Lee, Hyang Burm;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.41 no.3
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    • pp.137-141
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    • 2013
  • Diversity of endophytic fungi of two species associated with host plants, Pinus densiflora and Larix kaempferi in Mt. Oser were investigated. Endophytic fungi were isolated from surface sterilized leaves of the 13 host plants and identified by morphological traits and rDNA ITS sequences analysis. Totally 37 isolates were discovered and identified into 17 taxa. Of them, 59% isolates belonged to Leotiomycetes, 30% isolates Sordariomyetes, 8% isolates Dothideomycetes and 3% isolates Agaricomycetes. Results showed a similar diversity pattern with previous studies. Also, species diversity (H') of endophytic fungi isolated from L. kaempferi was higher than that from P. densiflora. The endophytic species composition showed significant differences between host plants. Particularly, taxon of Lophodermium is a major genus in the host plants. However, critical research of the endophytic species diversities within the genus in Korea is required. The communities of endophytic fungi isolated in this study showed differences in diversities and species composition between host plants.

A Case Report of Imports Morphological Variation of Pinelliae Tuber Based on the Genetic Analysis (유전자 분석 기반 수입산 형태 변이 반하 유통 사례 보고)

  • Kim, Wook Jin;Choi, Goya;Noh, Sumin;Moon, Byeong Cheol
    • The Korea Journal of Herbology
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    • v.37 no.5
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    • pp.9-16
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    • 2022
  • Objectives : The purpose of this study is to report that applying the genetic discrimination method to Pinelliae Tuber is suitable as a countermeasure for the limitations of morphological identification announced publicly in the Ministry of Food and Drug Safety(MFDS). Methods : Randomly selected fifty samples in Pinelliae Tuber imported from China were used for morphological and genetic identification. The morphological identification was applied method announced publicly by the MFDS. The traits of morphological identification were classified as Pinellia ternata, P. tripartita, Pinellia pedatisecta, and Typhonium flagelliforme, according to the formation of tuberous root and tuber morphology. The genetic identifications were conducted by Sequence Characterized Amplified Region(SCAR) marker and DNA barcoding analysis for cross-validation, respectively. SCAR marker was verified according to the presence or absence of amplicon through PCR amplification using species-specific primers. DNA barcoding analysis used sequence information of the matK region. Results : As a result of the morphological identification, 27 out of 50 samples were identified as original species 'P. ternata' of genuine 'Pinelliae Tuber', and 23 were identified as adulterant species 'P. pedatisecta'. Unlike this, the genetic identification was identified as the original species 'P. ternata' in all 50 samples in the SCAR marker and matK regional sequence analysis. Conclusions : Pinelliae Tuber of morphological mutant that can not be classified by morphological identification is imported from China. The SCAR marker would be used as accurate and efficient assays for species identification of the morphological mutant.

Eleven previously unrecorded fungal species isolated from hyphosphere soil supporting wild mushrooms in Jeju Island (제주도 야생버섯 hyphosphere 토양에서 분리된 국내 미기록 진균 11종 보고)

  • Hyeongjin Noh;Ye In Kim;Dong Hyeung Lee;Pyung Yeol Ko;Hye Sung Park;Kang-Hyo Lee;Seong Hwan Kim
    • Journal of Mushroom
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    • v.21 no.4
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    • pp.228-240
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    • 2023
  • To understand microorganism effects on wild mushroom fruiting bodies, we investigated the fungi in hyphosphere soil supporting wild mushroom species Cortinarius violaceus, Amanita hemibapha, Laccaria vinacelavellanea, and Amanita verna found in the Gotjawal area of Jeju Island. Fungal species identification based on morphological traits and molecular analysis of ITS, LSU rDNA, and β-tubulin gene sequences resulted in isolation and identification of eleven fungal species previously unrecorded in Korea. These newly-recorded species are: Arthrinium kogelbergensis, Kalmusia longisporum, Keithomyces carneum, Neopyrenochaeta cercidis, Penicillium ranomafanaense, Phomatodes nebulosa, Pyrenochaeta nobilis, Tolypocladium album, Talaromyces kendrickii, Talaromyces qii, and Umbelopsis gibberispora, and their morphological characteristics and phylogenetic positions are described.

Diversity and Distribution of Natural Symbol Species as Local Government's Symbols (Bird, Flower, Tree): Identifying the Public Awareness on Biodiversity (지방자치단체 자연상징물(새, 꽃, 나무)의 다양성과 분포: 생물다양성의 인식도 평가)

  • Do, Yuno;Kim, Ji Yoon;Im, Ran-Young;Choi, Gi Ryong;Joo, Gea-Jae
    • Korean Journal of Ecology and Environment
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    • v.46 no.3
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    • pp.419-428
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    • 2013
  • We identified the diversity, geographical distribution, ecological characteristics of birds, trees, and flowers species designated as local government symbols as a means for understanding public awareness on biodiversity. A total of 114 species including 48 birds, 40 flowers, 36 tree species belonging to 40 orders 59 families 90 genus were designated as natural symbols. Pica pica (L.) in birds, Rhododendron schlippenbachii Maxim. among flowers, have also been designated as symbols. The tree Ginkgo biloba L. was designated with the highest frequency. Local governments located coastal area were selected bird species of the Laridae family and the tree species Camellia japonica L., of Pinaceae as their natural symbols. In contrast, local governments located inland have designated resident bird species such as P. pica and Columba rupestris (Pallas) and flower species from the Ericaceae as natural symbols widely distributed and easily observed throughout South Korea. However, many local governments have designated the same species as a natural symbol based on their size color and public appeal and popularity. The information about the popular species and their ecological traits are useful for establishing the criteria as flagship or iconic species selection and their roles in habitat conservation.

Selection of RAPD marker to discriminate the bolting-resistant varieties and commercial dried medicinal materials of Angelica species (당귀 내추대성 품종 및 건재약재 판별을 위한 RAPD marker 선발)

  • Bang, Kyong-Hwan;Yu, Hong-Seob;Koo, Dal-Hoe;Cho, Joon-Hyeong;Park, Hee-Woon;Seong, Nak-Sul;Park, Sang-Il;Kim, Hong-Sig
    • Korean Journal of Medicinal Crop Science
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    • v.10 no.1
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    • pp.46-50
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    • 2002
  • In DNA level, genetic study of Angelica species was firstly conducted to discriminate the bolting-resistant or low bolting variety, so called as Manchu, from other Korea collected lines and also this technuque was applied to identify the origin of commercial dried materials obtained from current oriental medicinal market. By RAPD analysis with 72 primers including sixty of 10-mers and twelve of 20-mers, respectively, three primers, which were related to the bolting resistant traits of Angelica gigas, were identified. Comparing the RAPD bands, URP04 primer showed the 1.7 kb specific band, which seemed to be related to delaying bolting traits, since it was observed only in Jinbu elite lines but not in others. On the other hand, since 1.2 kb band amplified by OPD11 was observed in other collected lines but not in Manchu var. and Jinbu line, this primer also could be considered as a selection marker for identifying bolting resistant or delaying bolting traits. In the same manner, since OPP09 did not show 1 kb major band but produced 0.8 kb and 1.2 kb bands in Manchu var., these three bands amplified by the primer could be considered one of the important key specifying Manchu var. related with the trait of Angelica gigas. OPC02 primer showed the same band patterns in all Korean collected lines, but not in other foreign introduced lines, such as A. sinensis from China, and A. acutiloba from Japan. Since these four RAPD primers, OPD11, OPP09, URP04, and OPC02 showed the specific polymorphisms in Angelica species, thus, these were useful to discriminate the three Angelica species, A. gigas, A. sinensis, and A. acutiloba.