• The Journal of the Acoustical Society of Korea
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• v.36 no.6
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• pp.394-400
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• 2017

This paper shows the extension of SpSF (Sparse Spectrum Fitting) algorithm, which is one of covariance matrix fitting-based DOA (Direction-of-Arrival) estimation algorithms, from the time domain to the frequency domain, and presents that SpSF can be implemented in the frequency domain. The superiority of the SpSF algorithm has been demonstrated by comparing DOA estimation performance with the performance of Conventional DOA estimation algorithm in the frequency domain for sinusoidal incident signals.

• KSII Transactions on Internet and Information Systems (TIIS)
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• v.12 no.8
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• pp.4006-4020
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• 2018

In recent years, one of the most remarkable 5G technologies is massive multiple-input and multiple-output (MIMO) system which increases spectral efficiency by deploying a large number of transmit-antennas (eg. tens or hundreds transmit-antennas) at base station (BS). However, conventional massive MIMO system using single-polarized (SP) transmit-antennas increases the size of the transmit-array proportionally as the number of transmit-antennas increases. Hence, size reduction of large-scale transmit-array is one of the major concerns of massive MIMO system. To reduce the size of the transmit-array at BS, dual-polarized (DP) transmit-antenna can be the solution to halve the size of the transmit-array since one collocated DP transmit-antenna deploys vertical and horizontal transmit-antennas compared to SP transmit-antennas. Moreover, proposed DP massive MIMO system increases the spectral efficiency by not only in the space domain but also in the polarization domain whereas the conventional SP massive MIMO system increases the spectral efficiency by space domain only. In this paper, the comparative performance of DP and SP massive MIMO systems is analyzed by space division multiple access (SDMA) and space-polarization division multiple access (SPDMA) respectively. To analyze the performance of DP and SP massive MIMO systems, DP and SP spatial channel models (SCMs) are proposed which consider depolarized propagation channels between transmitter and receiver. The simulation results show that the performance of proposed 32 transmitter (Tx) DP massive MIMO system improves the spectral efficiency by about 91% for a large number of user equipments (UEs) compare to 32Tx SP massive MIMO system for identical size of the transmit-array.

• The Journal of the Acoustical Society of Korea
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• v.39 no.3
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• pp.191-199
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• 2020

Currently, studies on the estimation algorithm based on compressive sensing are actively underway, but to the best of our knowledge, no study on the performance of the Sparse Spectrum Fitting (SpSF) algorithm in nonuniform sensor arrays has been made. This paper deals with the derivation of the compressive sensing based covariance fitting algorithm extended to the frequency domain. In addition, it shows the performance of directon-of-arrival estimation of the frequency domain SpSF algorithm in non-uniform linear sensor array system and the sensor array failure situation.

• Journal of Microbiology and Biotechnology
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• v.30 no.7
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• pp.1104-1107
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• 2020

The N-terminal domain of the Pseudomonas sp. FB15 phytase increases low-temperature activity and catalytic efficiency. In this study, the 3D structure of the N-terminal domain was predicted and substitutions for the amino acid residues of the region assumed to be the active site were made. The activity of mutants, in which alanine (A) was substituted for the original residue, was investigated at various temperatures and pH values. Significant differences in enzymatic activity were observed only in mutant E263A, suggesting that the amino acid residue at position 263 of the N-terminal domain is important in enzyme activity.

• Bulletin of the Korean Mathematical Society
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• v.55 no.3
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• pp.809-818
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• 2018

We study those integral domains in which every proper ideal can be written as an invertible ideal multiplied by a nonempty product of proper radical ideals.

• Journal of Gastric Cancer
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• v.22 no.4
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• pp.319-338
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• 2022

Purpose: Gastric cancer (GC) has high morbidity and mortality, the cure rate of surgical treatment and drug chemotherapy is not ideal. Therefore, development of new treatment strategies is necessary. We aimed to identify the mechanism underlying Sp1 regulation of GC progression. Methods and Methods: The levels of Sp1, β-catenin, SET domain bifurcated 1 (SETDB1), and 15-hydroxyprostaglandin dehydrogenase (HPGD) were detected by quantitative reverse transcription polymerase chain reaction and western blot analysis. The targets of SETDB1 were predicted by AnimalTFDB, and dual-luciferase reporter assay was used for confirming the combination of Sp1, β-catenin, and SETDB1. HGC27 or AGS cells (1×10⁶ cells/mouse) were injected into mice via the caudal vein for GC model establishment. The level of Ki67 was detected using immunohistochemistry, and hematoxylin and eosin staining was performed for evaluating tumor metastasis in mice with GC. Results: HPGD was inhibited, while the protein levels of Sp1, β-catenin, and SETDB1 were up-regulated in GC tissues and cell lines. HPGD overexpression or SETDB1 silencing inhibited the proliferation, invasion, and migration of GC cells, and Sp1 regulated the proliferation, invasion, and migration of GC cells in a β-catenin-dependent manner. Furthermore, HPGD served as a target of SETDB1, and it was negatively regulated by SETDB1; additionally, Sp1 and β-catenin bound to the SETDB1 promoter and negatively regulated HPGD expression. We proved that Sp1 regulated GC progression via the SETDB1/HPGD axis. Conclusions: Our findings revealed that Sp1 transcriptionally inhibited HPGD via SETDB1 in a β-catenin-dependent manner and promoted the proliferation and metastasis of GC cells.

• Mycobiology
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• v.48 no.4
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• pp.296-303
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• 2020

Three yeast strains (Hue-1, Hue-8, and Hue-19) with strong heavy metal tolerance were isolated from mangosteen from Hue city, Vietnam. They exhibited identical phenotype and phylogeny. Sequence analysis of the D1/D2 region of the LSU rRNA gene and the internal transcribed spacer (ITS) region demonstrated that the closest relative of these strains is Papiliotrema sp. with 2.12% and 3.55-3.7% divergence in the D1/D2 domain, and ITS domain, respectively. Based on the physiological, biochemical, and molecular data, the three strains belong to a novel species of Papiliotrema genus, for which the name Papiliotrema huenov sp. nov. is proposed. These strains are highly tolerant of heavy metals compared to other yeasts, being able to grow in the presence of 2 mM Pb (II), 2 mM Cd (II), and up to 5 mM Ni (II), but no growth was observed in the presence of 1 mM As (III).

• Journal of Microbiology and Biotechnology
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• v.19 no.3
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• pp.229-237
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• 2009

Among 12 marine bacterial strains from the China coast that exhibited interesting bioactivity (positive for both antimicrobial and cytotoxic activities), only four strains, namely, NJ6-3-1, NJ6-3-2, NB-6, and YTHM-17, had a KS domain or A domain when screened for PKS and NRPS genes using a PCR. Interestingly, two of these strains belonging to Pseudoalteromonas and associated with the marine sponge Hymeniacidon perleve were positive for both PKS and NRPS, whereas the other two strains of Pseudoalteromonas did not have a PKS or NRPS gene. A molecular phylogeny analysis and DGGE analysis of the Pseudoalteromonas sp. indicated that they had a specific affinity with the host marine sponge Hymeniacidon perleve. Furthermore, an analysis of a partial sequence of Pseudoalteromonas sp. NJ6-3-2 isolated from the marine sponge Hymeniacidon perleve obtained from genomic walking using a computational approach indicated a relatively complete PKS module including auxiliary domains (DH, KR, and Cy).

• ALGAE
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• v.39 no.2
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• pp.59-74
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• 2024

Terrestrial cyanobacteria are extremely diverse. In urban areas, they can be found as black stains on the surface of building walls, stone monuments, or man-made structures. Many of the terrestrial cyanobacteria are still understudied. To expand knowledge of terrestrial cyanobacterial diversity, a polyphasic characterization was performed to identify 12 strains isolated from campus of University of the Ryukyus, Okinawa, Japan. Multigene phylogenetic analyses based on 16S rRNA gene and 16S-23S rRNA internal transcribed spacer (ITS) region showed that the isolated strains formed two independent subclades within Nodosilinea, and were distantly related to all described Nodosilinea species. The 16S-23S rRNA ITS secondary structures showed variations for D1-D1' and Box B domain, while V3 domain was almost identical among entire species of Nodosilinea, including the studied strains. In addition, a unique morphological character, i.e. forming nodule or spiral shape, was also observed in certain studied strains. According to polyphasic characterization, Nodosilinea coculeatus sp. nov. and Nodosilinea terrestrialis sp. nov., were proposed as two new species of terrestrial cyanobacteria from Okinawa.

• Journal of Life Science
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• v.19 no.11
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• pp.1522-1528
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• 2009

A marine bacterium was isolated from brown seaweeds for its ability to degrade alginate. Analysis of 16S ribosomal DNA sequence revealed that the strain belongs to Streptomyces like strain ALG-5 which was reported previously. New alginate lyase gene of Streptomyces sp. M3 was cloned by using PCR with the specific primers designed from homologous nucleotide sequences. The consensus sequences of N-terminal YXRSELREM and C-terminal YFKAGXYXQ were conserved in the M3 alginate lyase amino acid sequences. The homology model for the M3 alginate lyase showed a characteristic structure of $\beta$-jelly roll fold main domain like alyPG from Corynebacterium sp. ALY-1. The homogenate of the recombinant E. coli with the alginate lyase gene showed more degrading activity for polyguluronate block than polymannuronate block. The results from the multiple alignments and the homology modeling elucidated in the M3 alginate lyase can be classified into family PL-7.