• Genomics & Informatics
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• v.2 no.2
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• pp.99-106
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• 2004

In this paper we introduce PubMiner, an intelligent machine learning based text mining system for mining biological information from the literature. PubMiner employs natural language processing techniques and machine learning based data mining techniques for mining useful biological information such as protein­protein interaction from the massive literature. The system recognizes biological terms such as gene, protein, and enzymes and extracts their interactions described in the document through natural language processing. The extracted interactions are further analyzed with a set of features of each entity that were collected from the related public databases to infer more interactions from the original interactions. An inferred interaction from the interaction analysis and native interaction are provided to the user with the link of literature sources. The performance of entity and interaction extraction was tested with selected MEDLINE abstracts. The evaluation of inference proceeded using the protein interaction data of S. cerevisiae (bakers yeast) from MIPS and SGD.

• Genomics & Informatics
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• v.4 no.2
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• pp.87-93
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• 2006

With the rapid development of MS technologiesy, the demands for a more sophisticated MS interpretation algorithm haves grown as well. We have developed a new protein fingerprinting method using a binomial distribution, (fBIND). With the fBIND, we improved the performance accuracy of protein fingerprinting up to the maximum 49% (more than MOWSE) and 2% than(at a previous binomial distribution approach studied by of Wool et al.) as compared to the established algorithms. Moreover, we also suggest a the statistical approach to define the significance of transcription factors and motifs in the identified proteins based on the Gene Ontology (GO). Abbreviations: fBIND, fingerprinting using binomial distribution; GO, Gene Ontology; MS, Mass Spectrometry; PMF, peptide mass fingerprinting; nr, nonredundant; SGD, Saccharomyces Genome Database

• International Journal of Internet, Broadcasting and Communication
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• v.13 no.1
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• pp.100-106
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• 2021

Over the past few decades, natural language processing research has not made much. However, the widespread use of deep learning and neural networks attracted attention for the application of neural networks in natural language processing. Sentiment analysis is one of the challenges of natural language processing. Emotions are things that a person thinks and feels. Therefore, sentiment analysis should be able to analyze the person's attitude, opinions, and inclinations in text or actual text. In the case of emotion analysis, it is a priority to simply classify two emotions: positive and negative. In this paper we propose the deep learning based sentimental analysis system according to various optimizer that is SGD, ADAM and RMSProp. Through experimental result RMSprop optimizer shows the best performance compared to others on IMDB data set. Future work is to find more best hyper parameter for sentimental analysis system.

• Journal of the Korea Academia-Industrial cooperation Society
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• v.21 no.8
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• pp.521-529
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• 2020

Forest fires are one of the most important environmental risks that have adverse effects on many aspects of life, such as the economy, environment, and health. The early detection, quick prediction, and rapid response of forest fires can play an essential role in saving property and life from forest fire risks. For the rapid discovery of forest fires, there is a method using meteorological data obtained from local sensors installed in each area by the Meteorological Agency. Meteorological conditions (e.g., temperature, wind) influence forest fires. This study evaluated a Data Mining (DM) approach to predict the burned area of forest fires. Five DM models, e.g., Stochastic Gradient Descent (SGD), Support Vector Machines (SVM), Decision Tree (DT), Random Forests (RF), and Deep Neural Network (DNN), and four feature selection setups (using spatial, temporal, and weather attributes), were tested on recent real-world data collected from Gyeonggi-do area over the last five years. As a result of the experiment, a DNN model using only meteorological data showed the best performance. The proposed model was more effective in predicting the burned area of small forest fires, which are more frequent. This knowledge derived from the proposed prediction model is particularly useful for improving firefighting resource management.

• Journal of the Korea Academia-Industrial cooperation Society
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• v.22 no.5
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• pp.7-14
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• 2021

Tomato crops are highly affected by tomato diseases, and if not prevented, a disease can cause severe losses for the agricultural economy. Therefore, there is a need for a system that quickly and accurately diagnoses various tomato diseases. In this paper, we propose a system that classifies nine diseases as well as healthy tomato plants by applying various pretrained deep learning-based CNN models trained on an ImageNet dataset. The tomato leaf image dataset obtained from PlantVillage is provided as input to ResNet, Xception, and DenseNet, which have deep learning-based CNN architectures. The proposed models were constructed by adding a top-level classifier to the basic CNN model, and they were trained by applying a 5-fold cross-validation strategy. All three of the proposed models were trained in two stages: transfer learning (which freezes the layers of the basic CNN model and then trains only the top-level classifiers), and fine-tuned learning (which sets the learning rate to a very small number and trains after unfreezing basic CNN layers). SGD, RMSprop, and Adam were applied as optimization algorithms. The experimental results show that the DenseNet CNN model to which the RMSprop algorithm was applied output the best results, with 98.63% accuracy.

• Korean Journal of Remote Sensing
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• v.38 no.6_1
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• pp.1329-1341
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• 2022

Destroying the marine environment and marine ecosystem and causing marine accidents, marine debris is generated every year, and among them, submerged marine debris is difficult to identify and collect because it is on the seabed. Therefore, deep-learning-based semantic segmentation was experimented on waste fish nets and waste ropes using underwater images to identify efficient collection and distribution. For segmentation, a high-resolution network (HRNet), a state-of-the-art deep learning technique, was used, and the performance of each optimizer was compared. In the segmentation result fish net, F1 score=(86.46%, 86.20%, 85.29%), IoU=(76.15%, 75.74%, 74.36%), For the rope F1 score=(80.49%, 80.48%, 77.86%), IoU=(67.35%, 67.33%, 63.75%) in the order of adaptive moment estimation (Adam), Momentum, and stochastic gradient descent (SGD). Adam's results were the highest in both fish net and rope. Through the research results, the evaluation of segmentation performance for each optimizer and the possibility of segmentation of marine debris in the latest deep learning technique were confirmed. Accordingly, it is judged that by applying the latest deep learning technique to the identification of submerged marine debris through underwater images, it will be helpful in estimating the distribution of marine sedimentation debris through more accurate and efficient identification than identification through the naked eye.

• Journal of Korea Water Resources Association
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• v.55 no.12
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• pp.1011-1020
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• 2022

Previous studies for the assessment of submarine groundwater discharge (SGD) were perfomed for areas where a large amount of SGD was observed. Newly developed assessment methods were proposed that was based on an analytic solution using sharp interface model. The proposed mathematical equations used the existing observed groundwater level and hydrogeological data of Jeju Island as input data. The quantitatively assessed FSGD values were compared to the basin-scale recharge estimation values in Seong-San area in eastern Jeju. As a result of the study, it was estimated that the amount of FSGD in the Seongsan area ranges from about 2.65 to 9.15% of the amount of areal-recharge. Through the analysis of the FSGD combined with the analytic model, it is to be provided as a scientific tool to establish a more reasonable coastal water resource management plan.

• Journal of the Korean Chemical Society
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• v.57 no.3
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• pp.322-328
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• 2013

Copper iodide was employed as a modifier for preparation of a new carbon ceramic electrode. For the first time, the catalytic oxidation of amoxicillin (AMX) was demonstrated by cyclic voltammetry, chronoamperometry and amperometry methods at the surface of this modified carbon ceramic electrode. The copper iodide modified sol-gel derived carbon ceramic (CIM-SGD-CC) electrode has very high catalytic ability for electrooxidation of amoxicillin. The catalytic oxidation peak current was linearly dependent on the amoxicillin concentration and the linearity range obtained was 100 to 1000 ${\mu}mol\;L^{-1}$ with a detection limit of 0.53 ${\mu}mol\;L^{-1}$. The diffusion coefficient ($D=(1.67{\pm}0.102){\times}10^{-3}\;cm^2\;s^{-1}$), and the kinetic parameter such as the electron transfer coefficient (${\alpha}$) and exchange current density ($j_0$) for the modified electrode were calculated. The advantages of the modified CCE are its good stability and reproducibility of surface renewal by simple polishing, excellent catalytic activity and simplicity of preparation.

• International Journal of Computer Science & Network Security
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• v.23 no.5
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• pp.73-88
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• 2023

Brain tumors can also be an abnormal collection or accumulation of cells in the brain that can be life-threatening due to their ability to invade and metastasize to nearby tissues. Accurate diagnosis is critical to the success of treatment planning, and resonant imaging is the primary diagnostic imaging method used to diagnose brain tumors and their extent. Deep learning methods for computer vision applications have shown significant improvements in recent years, primarily due to the undeniable fact that there is a large amount of data on the market to teach models. Therefore, improvements within the model architecture perform better approximations in the monitored configuration. Tumor classification using these deep learning techniques has made great strides by providing reliable, annotated open data sets. Reduce computational effort and learn specific spatial and temporal relationships. This white paper describes transfer models such as the MobileNet model, VGG19 model, InceptionResNetV2 model, Inception model, and DenseNet201 model. The model uses three different optimizers, Adam, SGD, and RMSprop. Finally, the pre-trained MobileNet with RMSprop optimizer is the best model in this paper, with 0.995 accuracies, 0.99 sensitivity, and 1.00 specificity, while at the same time having the lowest computational cost.

• Journal of Digital Convergence
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• v.14 no.5
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• pp.485-491
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• 2016

The purpose of this study was to compare of the fall risk factors for elderly in the city. 62 people aged 65 years or older were classified as fallers and nonfallers based on experience of their falls in the previous year. By comparing the difference between the groups via evaluations of general characteristics, health related behavior and chronic disease, balance-related psychological (K-ABC) and physical measurement (BBS), depression (SGDS), and the correlations between the significant differences in variables were identified. According to the results, K-ABC, BBS, and SGDS are statistically significant differences between fallers and nonfallers (P<0.05). Also it has positive correlations between BBS and K-ABC (r=0.499) whereas negative correlation between K-ABC and SGDS(r=-0.472).