• Title/Summary/Keyword: Ring Flow

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Single-stranded DNA Enhances the Rate of Product Release During Nucleotide Hydrolysis Reaction by T7 DNA Helicase

  • Kim, Dong-Eun;Jeong, Yong-Joo
    • Bulletin of the Korean Chemical Society
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    • v.27 no.10
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    • pp.1618-1622
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    • 2006
  • Bacteriophage T7 gp4A' is a ring-shaped hexameric DNA helicase that catalyzes duplex DNA unwinding using dTTP hydrolysis as an energy source. To investigate the effect of single-stranded DNA (ssDNA) on the kinetic pathway of dTTP hydrolysis by the T7 DNA helicase complexed with ssDNA, we have first determined optimal concentration of long circular M13 single-stranded DNA and pre-incubation time in the absence of $Mg^{2+}$ which is necessary for the helicase-ssDNA complex formation. Steady state dTTP hydrolysis in the absence of $Mg^{2+}$ by the helicase-ssDNA complex provided $k_{cat}$ of $8.5\;{\times}\;10^{-3}\;sec^{-1}$. Pre-steady state kinetics of the dTTP hydrolysis by the pre-assembled hexameric helicase was monitored by using the rapid chemical quench-flow technique both in the presence and absence of M13 ssDNA. Pre-steady state dTTP hydrolysis showed distinct burst kinetics in both cases, indicating that product release step is slower than dTTP hydrolysis step. Pre-steady state burst rates were similar both in the presence and absence of ssDNA, while steady state dTTP hydrolysis rate in the presence of ssDNA was much faster than in the absence of ssDNA. These results suggest that single-stranded DNA stimulates dTTP hydrolysis reaction by T7 helicase by enhancing the rate of product release step.

Chemical Washing of PAH-Contaminated Soil with Cyclodextrins as a Main Surfactant: A Labscale Study (사이클로덱스트린을 이용한 PAH오염토양의 화학적 세정)

  • Sung Hyun Kwon;Daechul Cho
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.3 no.4
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    • pp.295-302
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    • 2002
  • PAHs (polycyclic aromatic hydrocarbons) deposited in soil are one of serious problems against sustainable land use. In this paper, chemical soil flushing in a packed sandy soil matrix using a natural surfactant, $\beta$-cyclodextrin (CD) was studied via a fluorescence spectroscopy and a dye labelling. The contaminants are lipophilic ring compounds- phenanthrene and naphthalene. Sand type and flushing intensity (rate and concentration) are chosen as important investigation variables. The removal efficiencies were proportional to flow rate, concentration, temperature of the flushing solution and voidity of the sand column. Initial sorption of the surfactant onto the soil matrix was found to be a key step while flow shear was more crucial in the latter steps. The residual portion of the surfactant, which was most likely to be due to the initial sorption, would not be so influential on this type of soil washing for long times. These results will be useful in future for pilot scale in situ washing and for establishing better soil washing strategy.

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Effect of Marangoni Flow on Surface Roughness and Packing Density of Inkjet-printed Alumina Film by Modulating Ink Solvent System.

  • Oh, Yeon-Jun;Kim, Ji-Hoon;Yoon, Young-Joon;Yoon, Ho-Gyu;Kim, Jong-Hee
    • Proceedings of the Korean Institute of Electrical and Electronic Material Engineers Conference
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    • 2010.06a
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    • pp.272-272
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    • 2010
  • We have fabricated alumina thick films by inkjet printing technology. Two different types of ink system were formulated in order to understand their evaporation behaviors and their evaporation effects on the powder distribution on, the surface during inkjet-printed alumina thick films. Single solvent system was formulated with N,N-dimethylformamide(DMF), which led to coffee ring effects which non-uniformly distributed alumina particles on the substrate during the ink evaporation. However, Co-solvent system which consists of both Water and DMF produced relatively uniform distribution of the particles on the substrate. We believe that these two different distributions of alumina particles are attributed to the ink fluid flow directions in the ink droplets ejected from the different ceramic ink system. We have modulated inkjet parameters such as dot-to-dot distance, line-to-line distance, jetting velocity and jetting drop size in order to find out the optimum condition for the printing of alumina thick films from two different ink systems. The surface roughness, microstructures and dielectric properties of these inkjet-printed alumina thick films were investigated.

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Effects of silica fume, superplasticizer dosage and type of superplasticizer on the properties of normal and self-compacting concrete

  • Mazloom, Moosa;Soltani, Abolfazl;Karamloo, Mohammad;Hassanloo, Ahmad;Ranjbar, Asadollah
    • Advances in materials Research
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    • v.7 no.1
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    • pp.45-72
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    • 2018
  • In the present study, a special attention has been paid to the effects regarding the use of different superplasticizers in different dosages. To do so, 36 mixes of normal and self-compacting concrete with two water/binder ratios of 0.35 and 0.45, four different types of superplasticizer including melamine-formaldehyde, naphthalene-formaldehyde, carboxylic-ether and poly-carboxylate, four different superplasticizer/cement ratios of 0.4%, 0.8%, 1.2% and 1.6% and two silica fume/cement ratios of 0% and 10% have been cast. Moreover, the initial and final setting time of the pastes have been tested. For self-compacting mixes, flow time, slump flow, V-funnel, J-ring and L-box tests have been carried out as well as testing the compressive strength and rupture modulus. For normal concrete mixes,slump test has been conducted to assess the workability of the mix and then for each mix, the compressive strength and rupture modulus have been determined. The results indicate that in addition to the important role of superplasticizer type and dosage on fresh state properties of concrete, these parameters as well as the use of silica fume could affect the hardened state properties of the mixes. For instance, the mixes whose superplasticizer were poly-carboxylic-ether based showed better compressive and tensile strength than other mixes. Besides, the air contents showed robust dependency to the type of the superplasticizer. However, the use of silica fume decreased the air contents of the mixes.

Research about Hyperspectral Imaging System for Pre-Clinical testing of Small Animal (소형동물 전임상실험을 위한 하이퍼스펙트럼 영상장비 연구)

  • Lee, kyeong-Hee;Choi, Young-Wook
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.56 no.12
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    • pp.2208-2213
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    • 2007
  • In this study we have developed a hyperspectrum imaging system for highly sensitive and effective imaging analysis. An optical setup was designed using acoustic optical tunable filter (AOTF) for high sensitive hyperspectrum imaging. Light emitted by mercury lamp gets split in to diffracted and undiffracted beams while passing though AOTF. GFP transfected HEK-293 cell line was used as a model for in vitro imaging analysis. Cells were first, analyzed by fluorescence microscope followed by flow cytometric analysis. Flow cytometric analysis showed 66.31% transfection yield in GFP transfected HEK-293 cells. Various images of GFP transfected HEK-293 cell were grabbed by collecting the diffracted light using a CCD over a dynamic range of frequency of 129-171 MHz with an interval of 3 MHz. Subsequently, for in vivo image analysis of GFP transfected cells in mouse, a whole-body-imaging system was constructed. The blue light of 488 nm wavelength was obtained from a Xenon arc lamp using an appropriate filter and transmitted through an optical cable to a ring illuminator. To check the efficacy of the newly developed whole-body-imaging system, a comparative imaging analysis was performed on a normal mouse in presence and absence of Xenon arc irradiation. The developed hyperspectrum imaging analysis with AOTF showed the highest intensity of green fluorescent protein at 153 MHz of frequency and 494 nm of wavelength. However, the fluorescence intensity remained same as that of the background below 138 MHz (475 nm) and above 162 MHz (532 nm). The mouse images captured using the constructed whole-body-imaging system appeared monochromatic in absence of Xenon arc irradiation and blue when irradiated with Xenon arc lamp. Nevertheless, in either case mouse images appeared clearly.

Development and Application of a Landfill Gas Migration Model (폐기물 매립지에서의 가스 거동에 관한 모델 개발과 적용)

  • Park, Yu-Chul;Lee, Kang-Kun;Park, Chul-Hwi;Kim, Yong-Woo
    • Economic and Environmental Geology
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    • v.29 no.3
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    • pp.325-333
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    • 1996
  • numerical model is developed to estimate gas flow in the landfill site. Darcy's law, the mass conservation law, and the ideal gas state equation are combined to compose the governing equation for the steady-state and transient-state gas flows. The finite element method (FEM) is used as the numerical solution scheme. Two-dimensional radial symmetric triangular ring element is used to discretize the simulation domain. The steady state model developed in this study is compared with AIRFLOW that is a commercial model developed by Hydrologic Inc. Mass balance test is performed on the transient gas flow simulation. The developed model is applied to analyze the gas extraction experiment performed by Daewoo Institute of Construction Technology at the Nanjido landfill in 1993. The developed model was registered at Korea Computer Program Protection Foundation.

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Methane-Steam Reforming Simulation for a High Temperature Solar Chemical Reactor (고온 태양열 화학 반응기에서의 메탄-수증기 개질반응 시뮬레이션)

  • Ko, Jo-Han;Seo, Tae-Beom
    • Journal of the Korean Solar Energy Society
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    • v.29 no.1
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    • pp.44-49
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    • 2009
  • Steam reforming of methane in the high temperature solar chemical reactor bas advantage in its heating method. Using concentrated solar energy as a heating source of the reforming reaction can reduce the $CO_2$ emission by 20% compared to hydrocarbon fuel. In this paper, the simulation result of methane-steam reforming on a high temperature solar chemical reactor(SCR) using Fluent 6.3.26 is presented. The high temperature SCR is designed for the Inha Dish-1, a Dish type solar concentrator installed in Songdo city. Basic SCR performance factors are referred to the former researches of the same laboratory. Inside the SCR porous metal is used for a receiver/reactor. The porous metal is carved like a dome shape on the incident side to increase the heat transfer. Also, ring-disc set of baffle is inserted in the porous metal region to increase the path length. Numerical and physical models are also used from the former researches. Methane and steam is mixed with the same mole fraction and injected into the SCR. The simulation is performed for a various inlet mass flow rate of the methane-steam mixture gas. The result shows that the average reactor temperature and the conversion rate change appreciably by the inlet mass flow rate of 0.0005 kg/s.

An Experimental Study on Freezing Behavior of NaCl and Heavy Metal Aqueous Solution Using Freeze Concentration Method (동결농축법을 이용한 염수 및 중금속 수용액의 동결거동에 관한 실험 연구)

  • Kim, Jung-Sik;Lim, Seung-Taek;Oh, Cheol
    • Journal of Navigation and Port Research
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    • v.37 no.2
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    • pp.129-135
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    • 2013
  • Recently, waste water treatment system is developed in small and middle size to get more economic advantage. Freeze concentration system has high thermodynamic efficiency and low energy consumption, can re-use purified water and cold energy obtained from ice. This study was experimentally performed to investigate pollution containment in frozen layer by cooling wall temperature, air-bubble flow methods, initial ice-lining thickness of frozen layer in NaCl aqueous solution and the representative heavy metals, Pb and Cr aqueous solution. As the result, a decrease in the cooling wall temperature bring a higher growth rate of ice front and the more solute was involved in frozen layer. The method to inject directly air-bubble into ice-liquid interface through ring shape nozzle gave high purity of ice compared to indirect method. Ice lining in 5mm thickness resulted in frozen layer with higher purity than 1mm thickness.

A Case Study of Panoramic Section Image Collection Method for Measuring Density - with matched images in the Seoul Beltway Sapaesan Tunnel - (밀도측정을 위한 구간영상 최적 수집주기 결정 연구(서울 외곽순환도로 사패산 터널구간을 대상으로))

  • Park, Bumjin;Roh, Chang-Gyun;Kim, Jisoo
    • The Journal of The Korea Institute of Intelligent Transport Systems
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    • v.13 no.4
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    • pp.20-29
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    • 2014
  • Density is applied both three major macroscopic traffic variables (traffic volume, speed, and density) and two measures of effectiveness (MOE) for level of service (LOS) on highway (density and V/C). Especially, it is known for the most accurate MOE on evaluating the LOS of highway. Despite such importance, there is a lack of study on density relatively than other variables for its difficulty of measurement. Existing density estimation methods have some limitations such as density values of same traffic flow vary with collecting time. In this study, we researched actual density measuring method with panoramic image, after each CCTV images in the Sapaesan Tunnel on Seoul Ring Expressway are matched into one panoramic image. Analysis through the Central Limit Theorem shows that density of 24 1 km-images, which means 24 second, applies traffic situation well. That is to say that reasonable density value regardless of collecting time, and practical density which represents actual traffic flow can be taken in case of measuring density by suggested collecting cycle.

Lane-wise Travel Speed Characteristics Analysis in Uninterrupted Flow Considering Lane-wise Speed Reversal (차로속도역전현상을 고려한 연속류 도로의 차로별 주행 속도 특성 분석)

  • Yang, Inchul;Jeon, Woo Hoon;Ki, Sung hwan;Yoon, Jungeun
    • The Journal of The Korea Institute of Intelligent Transport Systems
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    • v.15 no.6
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    • pp.116-126
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    • 2016
  • In this study, lane-wise traffic flow characteristics were analysed on uninterrupted flow using a new notion of "lane-wise travel speed reversal (LTSR)" which is defined as a phenomena that travel speed in the median lane is lower than other lanes. Mathematical formulation was also proposed to calculate the strength of LTSR. The experiment road site is Seoul Outer Ring Expressway (Jayuro-IC~Jangsoo-IC), and travel trajectories for each four lane were collected for weekdays (Mon. through Fri.) during morning peak. Comparing lane-wise travel speeds for entire test road section, no LTSR was observed, meaning that the travel speed in the median lane is the fastest, followed by 2nd, 3rd, and 4th lane as in order. Howerver, the result of microscopic analysis using 100-meter discrete road section based data shows that LTSR occurs many times. Especially the strength of LTSR is higher in congestion area and freeway merge and diverge segment. It is expected that these results could be used as a fundamental data when establishing lane-by-lane traffic operation strategy and developing lane-wise traffic information collection and dissemination technology.