• Bulletin of the Korean Chemical Society
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• v.31 no.10
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• pp.2877-2883
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• 2010

The folding kinetics of $WT^*$ ubiquitin variant with valine to alanine mutation at sequence position 26 (HubWA) was studied by stopped-flow fluorescence spectroscopy. While unfolding kinetics showed a single exponential phase, refolding reaction showed three exponential phases. The semi-logarithmic plot of urea concentration vs. rate constant for the first phase showed v-shape pattern while the second phase showed v-shape with roll-over effect at low urea concentration. The rate constant and the amplitude of the third phase were constant throughout the urea concentrations, suggesting that this phase represents parallel process due to the configurational isomerization. Interestingly, the first and second phases appeared to be coupled since the amplitude of the second phase increased at the expense of the amplitude of the first phase in increasing urea concentrations. This observation together with the roll-over effect in the second folding phase indicates the presence of intermediate state during the folding reaction of HubWA. Quantitative analysis of Hub-WA folding kinetics indicated that this intermediate state is on the folding pathway. Folding kinetics measurement of a mutant HubWA with hydrophobic core residue mutation, Val to Ala at residue position 17, suggested that the intermediate state has significant amount of native interactions, supporting the interpretation that the intermediate is on the folding pathway. It is considered that HubWA is a useful model protein to study the contribution of residues to protein folding process using folding kinetics measurements in conjunction with protein engineering.

• Archives of Pharmacal Research
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• v.20 no.2
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• pp.115-121
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• 1997

Ile-269 in horse liver alcohol dehydrogenase isoenzyme S(HLADH-S) was mutated to serine by phosphorothioate-based site-directed mutagenesis in order to study the role of the residue in coenzyme binding. The specific activity of the mutant(1269S) enzyme to ethanol was increased 49-fold. All turnover numbers of 1269S enzyme toward 9 primary alcohols were increased. The mutant enzyme showed 3.6, 4.6, 11.6-fold higher catalytic efficiency for $5{\beta}$-androstane-3, 17-dione, $5{\beta}$-cholanic acid-3-one and retinal than wild-type, respectively. The reaction mechanism of 1269S enzyme was ordered bi bi as wild-type's. These results indicate that the hydrophobic interaction of Ile-269 residue with coenzyme plays an important role in dissociation of coenzyme from enzyme-coenzyme complex, which has been known as the rate limiting step of ADH reaction.

• Korean Journal of Environmental Agriculture
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• v.29 no.2
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• pp.109-114
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• 2010

Rape residue as green manure is an emerging alternative of chemical fertilizer to improve soil quality and crop productivity. Objective of this research was to evaluate the effectiveness of rape residue as green manure on reduction of chemical fertilizer and suppression of weed occurrence in rice-rape double cropping system. Greenhouse experiment was conducted with four treatments: the combination of rape residue and three different N application rates (0, 30 and 70% of recommended application rate (7.8 kg N $10a^{-1}$)) and 100% chemical fertilizer as a control. No difference in rice clum length was observed for all treatments, while panicle length was highest in a treatment of rape residue+70% chemical fertilizer (Rape+70%CF). In addition, rice grain weight at a Rape+70%CF treatment increased by 19% compared to the control. This treatment also reduced weed density and biomass by 58 and 53%, respectively, compared to the control. Our results suggest that use of rape residues as green manure is an environment friendly and effective way to reduce chemical fertilizer and to enhance crop productivity in rice-rape double cropping system in Korea.

• Korean Journal of Environmental Agriculture
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• v.21 no.4
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• pp.279-285
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• 2002

Pesticide residues in some fruits collected at Noeun wholesale market, Daejeon were surveyed and assessed its risk. In 120 samples, the detection rate of pesticide was 70.8% and the rate exceed MRL was 1.67%. Highly detection rate of commodities was apple, peach and grape. Organophosphorus, organochlorine and pyrethroid insecticide were found with similar rate relatively, but most of fungicides were procymidone(dicarboximides) and chlorothalonil(organochlorine). The order of detected pesticide were chlorothalonil, chlorpyrifos, fenvalerate, procymidone, deltamethrin and EPN. In order to assess risk estimated intake amount of each pesticide was compared to ADI. Although some peach were exceed MRL the total amount and uptake pesticides was less than 1.22% comparing to ADI.

• Korean Journal of Food Science and Technology
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• v.28 no.3
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• pp.490-496
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• 1996

This study was undertaken in order to elucidate the elimination of phenthoate residues by washing and cooking processes of rice which if the most important food crop in Korea. When contaminated rice was washed with distilled water three times, the removal rate of total phenthoate was 51%. The removal rate in the successive washings was 37.3% (wash filtrate 7.8%, wash sediment 29.5%) in the first, 14.3% (wash filtrate 6.2%, wash sediment 8.1%) in the second and 8.9% (wash filtrate 5.8%, wash sediment 3.1%) in the third washings. More than half of the residue was removed by the first washing and most residues were found in the sediment rather than in the filtrate of the rice washings. The residue rate of phenthoate after cooking by an electric rice cooker was 41%, indicating that the removal rate after cooking was 59%, because phenthoate is thermally stable at the cooking temperature. In conclusion, phenthoate residues contaminated in rice grains are grcatly removed in the washing process and it is desirable to wash the grains before cooking in order to decrease the hazards from pesticide residues such as phenthoate. Reduction factor of phenthoate in rice cooking is proposed to be 0.4.

• The Korean Journal of Pesticide Science
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• v.13 no.4
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• pp.241-248
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• 2009

Pre-Harvest Residue Limit (PHRL) of bifenthrin during cultivation of grape was established by utilizing the dissipation curve and biological half-life of bifenthrin calculated from the analysis of 0, 1, 2, 3, 5, 7, 10, 15 days after treatment of bifenthrin. Grape sample was extracted and partitioned with acetonitrile and dichloromethane, respectively, and bifenthrin was determined with GC/ECD. Limit of quantitation (LOQ) of bifenthrin was 0.01 ng. Recoveries at two fortification levels of 0.1 and $0.5\;mg\;kg^{-1}$ were $104.08\;{\pm}\;1.24$ and $92.25\;{\pm}\;3.13%$, respectively. The biological half-lives of bifenthrin were about 21 days at standard application rate, while, 23 days at double application rate. Dissipation of bifenthrin on grape was not influenced by growth dilution effect. The PHRLs of bifenthrin were recommended as 0.60 and $0.55\;mg\;kg^{-1}$ for 10 and 5 days before harvest, respectively.

• The Korean Journal of Pesticide Science
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• v.17 no.3
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• pp.145-154
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• 2013

Flonicamid was a water-soluble and systemic insecticide. It was applied to control neonicotinod pesticide-resistant cotton aphid in sweet peppers. However, the residue levels of total flonicamid in sweet pepper exported to Japan in 2009 were exceeded the maximum residue limit (MRL). This study was conducted to elucidate residual properties of flonicamid parent compound and its metabolites in sweet peppers. It was carried out to compare the variation of residues in sweet pepper in three different greenhouses for 21 days after 3 times application with 7 days interval. The mean residues were 0.176, 0.152 and 0.108 mg $kg^{-1}$ and the residue levels in sweet pepper among three greenhouses show significant difference. The maximum residue levels were detected 10 days later after last treatments. The overall residue levels were lower than MRL 2.0 mg $kg^{-1}$ (by Korea) and 0.4 mg $kg^{-1}$ (by Japan in 2009 but now revised MRL is 2.0 mg $kg^{-1}$). But the residue level of total flonicamid at the 21th day after 3 times treatment with 7 days interval was 0.429 mg $kg^{-1}$ restricted by the application of double rate than recommended rate. The amounts of metabolites, TFNA, 4-Trifluoro methyl nicotinic acid and TFNG, N-(4-trifluoro methyl nicotinoyl) glycine were increased while flonicamid parent compound was decreased over time. Therefore the longer trial period should be needed for flonicamid in sweet peppers.

• The Korean Journal of Pesticide Science
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• v.12 no.1
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• pp.67-73
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• 2008

The dissipation patterns of a boscalid in cucumber under greenhouse condition was investigated to establish pre-harvest residue limit (PHRL) and biological half-life. Initial concentration of boscalid in cucumber at standard application rate was $7.29\;mg\;kg^{-1}$ and decreased to $0.04\;mg\;kg^{-1}$ after 15 days with half-life of 1.9 day, while the initial concentration was $14.69\;mg\;kg^{-1}$ and decreased to $0.11\;mg\;kg^{-1}$ after same period with half lift of 2.0 day at double application rate. PHRL was suggested by prediction curve derived from the decay curve of boscalid at double rate treatment. For example, $10.39\;mg\;kg^{-1}$ was calculated for 10 days before harvest, and $1.73\;mg\;kg^{-1}$ for 5 days. Dilution effect was major factor far the decrease of boscalid residue due to fast increasement of weight of cucumber during cultivation. Final residues level of boscalid was predicted based on the dissipation curve and guideline on safe use, when boscalid was used to control powdery mildew and gray mold. At standard rate application, $1.26\;mg\;kg^{-1}$ and $1.33\;mg\;kg^{-1}$ were calculated as final residue levels for control powdery mildew and gray mold, respectively, which are above the MRL(Meximum Residue Limit).

• Korean Journal of Environmental Agriculture
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• v.33 no.4
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• pp.306-313
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• 2014

BACKGROUND: Forest soils contain microbes capable of consuming atmospheric methane ($CH_4$), an amount matching the annual increase in $CH_4$ concentration in the atmosphere. However, the effect of plant residue production by different forest structure on $CH_4$ oxidation is not studied in Korea. The objective of this study was to evaluate the effect of Korean alpine soils having different forestation structure on $CH_4$ uptake rates. METHODS AND RESULTS: the $CH_4$ flux was measured at three sites dominated with pine, chestnut and oak trees in southern Korea. The $CH_4$ uptake potentials were evaluated by a closed chamber method for a year. The $CH_4$ uptake rate was the highest in the pine tree soil ($1.05mg/m^2/day$) and then followed by oak ($0.930mg/m^2/day$) and chestnut trees ($0.497mg/m^2/day$). The $CH_4$ uptake rates were highly correlated to soil organic matter and moisture contents, and total microbial and methanotrophs activities. Different with the general concent, there was no any correlation between $CH_4$ oxidation rates, and soil temperature and labile carbon concentrations, irrespective with tree species. CONCLUSION: Conclusively, the methane oxidation rate was correlated in positive manner with organic matter, abundance of methanotrophs. Methane oxidation was different among tree species. This results could be used to estimate methane oxidation rate in forest of Korea after complementing information about statistical data and methane oxidation of other site.

• The Korean Journal of Pesticide Science
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• v.21 no.1
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• pp.17-25
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• 2017

Dissipation pattern and biological half-lives of fungicides boscalid and pyraclostrobin were calculated on jujube. The pesticides were sprayed on jujube in two different field at the standard rate, respectively. The raw agricultural commodities were harvested at 0 (2 hr), 1, 3, 5, 7, 10 and 14 days after treatment, and analyzed by HPLC/DAD. The method limit of quantification (MLOQ) was $0.02mg\;kg^{-1}$ for boscalid and pyraclostrobin. The recovery ranged 101.8~109.3% with below 5% of CV (Coefficient of variation) for boscalid and 104.2~115.4% with below 5% of CV for pyraclostrobin. An average initial deposit at field 1 and field 2 samples were observed 0.40 and $0.48mg\;kg^{-1}$ for boscalid and, 0.76 and $0.57mg\;kg^{-1}$ for pyraclostrobin, respectively. The biological half-lives of field 1 and field 2 were 11.0 and 13.2 day for boscalid, and 6.1 and 12.7 days for pyraclostrobin.