• 한국균학회지
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• 제44권3호
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• pp.196-200
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• 2016

2015년 6월 초순, 한지형 잔디인 Kentucky bluegrass "Midnight II" 품종이 식재된 서울시 소재 잔디밭에서 잎마름 증상, 뿌리썩음 증상 및 개구리 눈 모양의 전형적인 summer patch 병징이 관찰되었다. 병원균의 정확한 동정을 위해 이병 잎과 뿌리에서 병원균을 분리하고, 배양학적 및 균학적 특징과 분자마커를 이용한 계통학적 유연관계 분석을 실시하였다. 그 결과, 분리된 병원균은 배양 10일 후 약 50~60 mm 가량 생장하였고, 균사는 회백색을 띄며 중앙부터 황록색 혹은 갈색으로 변색되었다. 경자(phialides)의 경우, 그 유사조직이 주로 균사의 말단에서 관찰되었으나, 분생포자는 관찰되지 않았다. 분리된 병원균의 정확한 동정과 계통학적 유연관계 분석을 위하여, large subunit (LSU)와 RNA polymerase II large subunit (RPB1) 유전자를 증폭시킨 후 염기서열 분석을 진행하고 계통학적 유연관계를 분석하였다. 그 결과, 분리된 병원균은 Magnaporthiopsis poae M47 균주와 가장 근연한 관계에 있는 것으로 확인되었다. 또한 potato dextrose agar (PDA) 배지에서 배양된 병원균을 멸균된 메스로 잘라 동일한 품종의 잔디에 접종한 결과, 약 20일 후 잎마름 증상을 확인할 수 있었다. 따라서 본 연구에서는 국내 Kentucky bluegrass에 summer patch병을 일으키는 원인균을 Magnaporthiopsis poae로 보고하고, 위 병원균에 의한 한지형 잔디의 병징을 여름잎마름병으로 제안하고자 한다.

• 대한핵의학회지
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• 제28권2호
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• pp.220-226
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• 1994

RT-PCR법에 의한 HCV-RNA검출을 임상검사에 적용하는 노력의 일환으로 biotin 및 $^{125}I$을 표지시킨 primer를 이용하여 최근 개발되어 있는 상품화된 kit 로 HCV-RNA 검출을 시도하고 그 결과를 평가하여 보았다. 연구대상은 anti-HCV 양성인 118명의 성인환자로, 방법은 환자 혈청내의 HCV-RNA를 guanidium-thiocynate 용액을 이용하여 추출한 뒤 AMPLICIS II $HCV^{(R)}$(CIS, France)kit를 이용하여 cDNA로 역전사 후 1차 증폭을 시행하고, 다시 소량의 1차 증폭산물을 biotin과 $^{125}I$으로 각각 표지된 1쌍의 Primer로 이용하여 2차 증폭을 시행하였다. 증폭산물은 avidin이 코팅된 시험관에 반응시키고 감마선 계수기로 계수하였다. 검사의 재현성을 보기 위하여 anti-HCV 양성인 환자 혈청 중 무작위로 51개의 검체를 선정하여 반복실험하였고, 만성 간질환 환자로부터 얻은 34개의 검체는 본 연구소에서 확립된 다른 RT-PCR 방법으로도 검사를 병행하여 비교하였다. 결과는 다음과 같다. 1) Anti-HCV 양성이면서 조직검사상 만성감염이나 간경화 소견을 보이거나 6개월이상 지속적인 간기능 이상을 나타낸 환자 88명 중 85명 (97%)에서 HCV-RNA 양성이었고, 6개월 이상 간기능이 정상이었던 30명중에서는 73%인 22명에서 HCV-RNA양성 이었다. 2) 두가지 다른 방법으로 RT-PCR을 병행한 34명중, kit를 사용한 경우는 32명(94%)에서 양성소견을 보였고, 기존방법대로 전기 영동 후 ethidium bromide로 염색한 경우는 27명 (79%)에서 양성을 나타내었다. 3) 검사의 재현성을 보기 위하여 anti-HCV 양성인 51개의 검체를 2번 반복 실험하였을때, 82%에서 일치된 결과를 얻을 수 있었다. 이상에서 biotin 및 $^{125}I$ 표지된 primer로 구성된 kit를 이용했을 때 기존방법에 비하여 예민하게 HCV-RNA를 검출할 수 있었다. 그러나 여전히 검사에 많은 노력과 시간이 소요되고 반복 검사시 검사간 변이가 상당히 존재하고 있어 정도관리에 세심한 주의가 필요할 것으로 사료되었다.

• Animal cells and systems
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• 제2권2호
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• pp.259-267
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• 1998

A deletion of one out of the two copies of 9-bp repeat sequence (CCCCCTCTA), between the cytochrome oxidase II and Iysine tranfer RNA (COII/$tRNA^{Lys}$) genes in human mitochondrial DNA (mtDNA) has been used as a polymorphic anthropological marker for people of east Asian origin, and to lesser extent, Pacific and African populations. We searched for the 9-bp deletion of the intergenic COII/$tRNA^{Lys}$ Lys region in two Korean populations (175 from Seoul and 38 from Cheju) and examine the distibution of this deletion in world populations. The 9-bp deletion was detected directly by electrophoresis of the polymerase chain reaction (PCR)-amplified nucleotide(nt) 8211-8310 mtDNA fragment. The frequencies of the 9-bp deletion were significantly different between the Seoul (16%) and Cheju (8%) populations. Examination of data from the world populations suggests a geographic gradient. The frequency reaches its highest values in some Pacific island populations and decreases along the southeast Asia-Siberia transect. In spite of this geographic gradient, Mongoloid populations including Korean, Chinese, Japanese, and Mongolian populations were relatively homo-geneous with regard to the 9-bp deletion type of the intergenic COII/$tRNA^{Lys}$ region. These results indicate Koreans are genetically related to northeast Asian populations, and have a maternal mongoloid ancestry. Therefore, the 9-bp deletion of the intergenic COII/$tRNA^{Lys}$ region will provide significant information to elucidate the historical patterns of migration of the Mongoloids.

• IMMUNE NETWORK
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• 제9권3호
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• pp.106-113
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• 2009

Background: We previously demonstrated remarkable differences in the expression of IL-8/CXCL8 in aortic tissues and vascular smooth muscle cells (VSMC) from spontaneously hypertensive rats (SHR) compared to VSMC from normotensive Wistar-Kyoto rats (WKY). In the present study, we investigated the direct effect of IL-8/CXCL8 on expression of 12-lipoxygenase (LO), a hypertensive modulator, in SHR VSMC. Methods: Cultured aortic VSMC from SHR and WKY were used. Expression of 12-LO mRNA was determined by real-time polymerase chain reaction. Phosphorlyation of ERK1/2 and production of 12-LO and angiotensin II subtype 1 ($AT_1$) receptor were assessed by Western blots. IL-8/CXCL8-stimulated DNA synthesis was determined by measuring incorporation of [$^3H$]-thymidine. And effect of IL-8/CXCL8 on vascular tone was determined by phenylephrine-induced contraction of thoracic aortic rings. Results: Treatment with IL-8/CXCL8 greatly increased 12-LO mRNA expression and protein production compared to treatment with angiotensin II. IL-8/CXCL8 also increased the expression of the $AT_1$ receptor. The increase in 12-LO induced by IL-8/CXCL8 was inhibited by treatment with an $AT_1$ receptor antagonist. The induction of 12-LO mRNA production and the proliferation of SHR VSMC by IL-8/CXCL8 was mediated by the ERK pathway. The proliferation of SHR VSMC and the vascular contraction in the thoracic aortic ring, both of which were induced by IL-8/CXCL8, were inhibited by baicalein, a 12-LO inhibitor. Conclusion: These results suggest that the potential role of IL-8/CXCL8 in hypertensive processes is likely mediated through the 12-LO pathway.

• Asian Pacific Journal of Cancer Prevention
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• 제15권17호
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• pp.7223-7228
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• 2014

The MYH11 gene may be related to cell migration and adhesion, intracellular transport, and signal transduction. However, its relationship with prognosis is still uncertain. The aim of this study was to investigate correlations between MYH11 gene expression and prognosis in 58 patients with stage II and III colorectal cancer. Quantitative real-time polymerase chain reaction was performed in fresh CRC tissues to examine mRNA expression, and immunohistochemistry was performed with paraffin-embedded specimens for protein expression. On univariate analysis, MYH11 expression at both mRNA and protein levels, perineural invasion and lymphovascular invasion were related to disease-free survival (p<0.05; log-rank test). Cancers with lower MYH11 expression were more likely to have a poor prognosis. Otherwise, MYH11 expression was unrelated to patient clinicopathological features. On multivariate analysis, low MYH11 expression proved to be an independent adverse prognosticator (p<0.05). These findings show that MYH11 can contribute to predicting prognosis in stage II and III colorectal cancers.

• Asian Pacific Journal of Cancer Prevention
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• 제17권5호
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• pp.2429-2434
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• 2016

Transforming growth factor-B1 ($TGF-{\beta}1$ )and its coreceptor endoglin (ENG) have been shown to contribute to hepatocellular tumor development and malignant progression. Our aim was to evaluate the serum expression levels of $ENG/TGF-{\beta}1$ mRNAs and risk of hepatocellular carcinoma in cirrhotic Egyptian patients. Our study included 77 subjects. Real time polymerase chain reaction was used to evaluate the expression level of ENG and $TGF-{\beta}1$mRNAs. The relative expression ratio of ENG mRNA was 0.82 (0.1 -3.2), 0.66 (0.15-5.3), 0.38(0.007-2.8) and 0.12 (0.00-0.22) and the relative expression ratio of $TGF-{\beta}1$mRNA was 1.4 (0.19 -6.2), 1.2 (0.22-4.3), 1.0 (0.15-4.4) and 0.6 (0.00-2.2) for cirrhotic HCC cirrhotic, HCC only and healthy control groups respectively. Increased ENG and $TGF-{\beta}1$ mRNA gene expression was correlated with TNM clinical stage. The expression ratio in TNM stage III-IV 1.1 (0.07-3.2), 1.55 (0.15-6.2) was statistically significantly higher than that in stage I-II 0.47 (0.007-2.8), 1.0 (0.31-4.4) (P<0.05). Our data suggested that increased ENG and $TGF-{\beta}1$ gene expression may participate in hepatocarcinogenesis and increased risk of HCC in individuals with cirrhosis. Early screening for evidence of cirrhosis and consideration of ENG and $TGF-{\beta}1$ as targets for therapy and treatment strategies are warranted.

• The Korean Journal of Physiology and Pharmacology
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• 제1권2호
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• pp.151-159
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• 1997

In an attempt to investigate whether hemorrhage affects the gene expression of the renin-angioteusin system (RAS) components in the brain and peripheral angiotensin-generating tissues, changes in mRNA levels of the RAS components in response to hemorrhage were measured in conscious unrestrained rats. Wistar rats were bled at a rate of 3 ml/kg/min for 5 min, and then decapitated 7 h after hemorrhage. Levels of mRNA for renin, angiotensinogen and angiotensin $II-AT_1$ receptor subtypes ($AT_{1A}$ and $AT_{1B}$) were determined with the methods of northern blot and reverse transcriptase-polymerase chain reaction (RT-PCR). Hemorrhage produced a profound hypotension with tachycardia, but blood pressure and heart rate recovered close to the basal level at 7 h. Plasma and renal renin levels were significantly increased at 7 h. Hemorrhage induced rapid upregulation of gene expression of both $AT_{1A}$ and $AT_{1B}$ receptor subtypes in the brainstem and hypothalamus, downregulation of them in the adrenal gland and liver. However, renin mRNA level increased in the brainstem, decreased in the liver, but was not changed in the hypothalamus, kidney and adrenals after hemorrhage. Angiotensinogen mRNA level was not significantly changed in any of the tissue except a slight increase in the liver. The kidney and liver did not show any significant change in gene expression of the RAS components. These results suggest that gene expression of the RAS in central and peripheral tissues are, at least in part, under independent control and the local RAS in each organ plays specific physiologic role.

• 한국응용곤충학회지
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• 제37권1호
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• pp.23-30
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• 1998

DNA의 제한요소단편 다형현상(RFLP)이 유전변이 연구에 널리 이용되고 있다. 본 연구는 파밤나방(Spodoptera exigua(H bner)) 미토콘드리아 DNA(mtDNA)의 RFLP방법을 개발하기 위해 게놈 크기 측정 및 PCR primer들을 선발하였다. 파밤나방의 mtDNA 전체크기는 약 16kb였다. 대부분 곤충 mtDNA에 적합하게 구성된 (Simon et al., 1994)29개 promer들중 21개가 파밤나방의 mtDNA증폭에 적합했다. 이들 primer들을 이용하여 여러 유전자 영역(CO-I, CO-II, Cyt-B, ND-1, 12S rRNA, 16S rRNA 및 일부 tRNA)의 일분 또는 전체를 포함하는 유전자 절편을 증폭시켰다. 일반적으로 다형을 보이는 primer조합을 중심으로 4염기 제한부위를 인식하는 8종의 제한 효소를 통해 분석된 PCR-RFLP는 서로 다은 지역(안동, 경산, 순천) 집단들간에 제한부위에 있어서 차이가 없었으나 일부 영역에서는 길이 차이를 보여 유용한 유전지표로서의 가능성을 제시했다.

• The Korean Journal of Physiology and Pharmacology
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• 제10권6호
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• pp.343-347
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• 2006

The present study was designed to investigate the effects renin-angiotensin-aldosterone system (RAAS), endothelin (ET) and local natriuretic peptide (NP) system for glomerulopathy induced in the experimental bilateral ureteral obstructive rats. Sprague-Dawley male rats ($200{\sim}220g$ body weight) were bilaterally obstructed by ligation of the proximal ureters for 24 hours. Control rats were treated in the same ways, except that no ligature was made. The glomeruli were isolated from cortex by graded sieve methods, and the mRNA expressions of local renin-angiotensin system (RAS), aldosterone synthase (CYP11B2), endothelin-1 (ET-1) and NP system were determined by real-time polymerase chain reaction. Following the bilateral ureteral obstruction, the mRNA expressions of renin, angiotensin converting enzyme 1 as well as ET-1 were increased, while that of angiotensin converting enzyme 2 was not changed. The expressions of CYP11B2 and angiotensin II receptors were not changed. C-type natriuretic peptide (CNP) expression was increased, while its receptors (natriuretic peptide receptor-B) were not changed. We suggest that the upregulation of local RAS and ET playa role in the progressive glomerular injury, and that the enhanced CNP activity also plays a compensatory role in obstructive uropathy in the glomerulus.

• Mycobiology
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• 제50권4호
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• pp.203-212
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• 2022

Fungi act as important decomposers in the forest environment. They recycle essential nutrients, promote plant growth through mycorrhizal relationships, and act as food for small animals. Samples of 265 indigenous fungal species were collected from Mudeungsan National Park in 2020. These species were identified based on morphological, molecular, and phylogenetic analyses using the internal transcribed spacer (ITS), nuclear large subunit rRNA (LSU), and RNA polymerase II second largest subunit (rpb2) regions. Subsequently, seven species were identified as unrecorded species in Korea: Cordyceps cicadae, Dentocorticium bicolor, Hymenochaete nanospora, Physisporinus crataegi, Rigidoporus piceicola, Russula raoultii, and Scutellinia crinita. This study reveals their detailed macro- and microscopic morphological characteristics with phylogenetic trees to report them as unrecorded species in Korea.