• 제목/요약/키워드: Plasmid DNA

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Agrobacterium tumefaciens의 염색체 DNA내에 존재하는 종양 유발 지역의 클로닝 (Cloning of agrobacterium tumefaciens chromosomal virulence region)

  • 심웅섭
    • 미생물학회지
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    • 제28권2호
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    • pp.104-108
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    • 1990
  • Ti-plasmid에 의하여 식물체에 종양이 형성되기 위해서는 맨먼저 Agrobacteriuin tumefariens가 식물세포에 부착되어야 하는데, 이에 필요한 유전자들은 세균의 염색체 DNA내에 존재한다. 이들 유전자를 클로닝하기 위하여 transposon 쑤5를 사용하여 A. tumefaciens A5512에 돌연변이를 유발시켰다. 그 결과 식물세포에 부착하지 못하며, 종양을 유발시키지 못하는 두개의 돌연변이체를 얻었다. 이 두 돌연변이체 중 하나로부터 세균이 식물세포에 부착하는데 관여하는 염색체 DNA내의 종양 유발 지역을 클로닝하였다.

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Survey of the heterogeneous gene expression in olive flounder muscle using the luciferase reporter gene system

  • Hong, Suhee;Lee, Sang-Jun
    • 한국어병학회지
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    • 제16권3호
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    • pp.147-152
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    • 2003
  • The CMV promoter driven luciferase reporter gene coding plasmid (pcDNA-luc) was constructed and used as a model for DNA immunization study. Expression of the recombinant luciferase protein was confirmed in vitro in RTG-2 cell line before using in vivo study in olive flounder. In dose response study, the maximum expression of the luciferase gene was found in the group injected with 10-15μg of plasmid DNA. The kinetic study showed that the luciferase gene expression was reached at the maximum level at one day after injection and slightly decreased after then but significantly high level of expression was sustained until the conducted experiment of 7 days. In the study of tissue distribution of gene expression, it was found that luciferase gene was expressed at the significant level in immune organs such as gill and spleen, located far from the injected site, suggesting the systemic distribution of the intramuscularly injected DNA in olive flounder.

오이 모자이크 바이러스 위성RNA의 cDNA가 도입된 형질전환 담배의 육성 (Transgenic Tobacco Plants Introduced with cDNA of Cucumber Mosaic Virus Satellite RNA)

  • 이상용;홍은주;최장경
    • 한국식물병리학회지
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    • 제11권1호
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    • pp.80-86
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    • 1995
  • The cDNA of CMV-As satellite RNA was introduced into tobacco plants (Nicotiana tabacum cv. Samsun NN) using a binary Ti plasmid vector system of Agrobacterium tumefaciens. The cDNA of satellite RNA introduced into tobacco plants was detected by polymerase chain reaction (PCR) and molecular hybridization analyses. Symptom development was distinctly suppressed in the transgenic tobacco plants when inoculated with CMV-Co. CMV concentration in the transgenic tobacco plants was decreased to 1/40 of non-transgenic tobacco plants. The kanamycin resistance gene of the transgenic tobacco plants was also detected in the progeny.

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수계에서 접합에 의하여 전이된 $Km^{r}$ 유전자 및 Plasmid 의 재배열 (Rearrangement of $Km^{r}$ Gene and Plasmid by Conjugal Transfer in aquatic Environments)

  • 이성기;김치경
    • 미생물학회지
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    • 제31권4호
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    • pp.286-291
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    • 1993
  • 수계환경에서 세균의 접합에 의해 나타난 conjugant 에서 plasmid 의 재배열과 $Km^{r}$ 유전자의 행방을 조사하기 위하여 자연계 분리균주와 유전공학적 변형균주(GMM)의 $Km^{r}$ 유전자의 전이빈도를 조사하는 동시에 3.9 kb 의 $Km^{r}$ 유전자를 DNA probe 로 사용하여 Southern analysis 를 실시하였다. $Km^{r}$ 유전자의 전이빈도는 실험실 환경에서 GMM 균주가 자연계균주(DK1) 보다 100배 더 높게 나타났으나, 무심천에서는 균주에 따라 차이가 없었다. 실험실환경에서 DK1 균주를 donor 로 하여 LB 나 FW 에서 얻은 conjugant 들은 모두 같은 수의 plasmid 를 가지고 있었으나 크기는 다르게 재배열하였다으며, $Km^{r}$ 유전자는 donor 의 R plasmid 인 pDK101 과 비슷한 위치에서 발견되었다. GMM 균주가 donor 일 때에는 180 kb 의 plasmid 가 새로 나타났으며, 특히 FW 수질에서 donor 가 DKC600 일 때는 $Km^{r}$ 유전자가 염색체에 삽입되어 있었다. 무심천의 자연계 수질환경에서는 DK1 이나 DKB701 이 donor 일 때 4개 및 8개의 plasmid 가 새로 나타났으며, $Km^{r}$ 유전자는 재배열된 4개의 plasmid 와 염색체에서 발견되었다. DKC600 이 donor 일 때는 recipient 의 작은 plasmid 가 모두 소실되었으나, $Km^{r}$ 유전자는 새로 나타난 plasmid 와 염색체에서 발견되었다. 그러므로 자연환경에서의 수질에서는 plasmid 의 재배열이 더 다양했으며, $Km^{r}$ 유전자도 다양한 크기로 재배열된 plasmid 에서 발견되었다.

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비브리오의 병원성 인자에 관한 연구 (The Virulence Factors of Vibrio spp.)

  • 오양효;김영부;박영민;김민정;차미선;김영희;임은경
    • 대한미생물학회지
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    • 제34권6호
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    • pp.513-518
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    • 1999
  • A total of 113 Vibrio sp. strains were examined for plasmid content which were subjected to digestion with restriction enzymes. About the 55% Vibrio spp. have the plasmid more than one. Most of these plasmid various derivatives ranged from $2.4\;kb{\sim}23\;kb$, especially two strains of V. mimicus and one strain of V. furnissii carried one high-molecular weight plasmid (molecular weight ranging between $70\;kb{\sim}100\;kb$). Results of restriction analysis for plasmid of this three strains were by no means the rule. For detection of tdh and ctx gene, the virulence factor involved in the pathogenesis, we carried out the TDH and CT assay, PCR amplification, and hybridization. A total 11 strains were produced TDH, involved in 9 strains of V. parahaemolyticus and 1 strain of V. alginolyticus from clinical isolates and 1 strains of V. mimicus from environmental isolates. In the experiments of tdh gene detection, in all, 3 strains of V. parahaemolyticus from clinical isolates and 2 strains from environmental isolates could be successfully amplified in 400 bp by PCR. The PCR results were consistent with DNA hybridization tests. In the experiments of CT assay, in all, 3 strains of V. cholerae from clinical isolate and 1 strain of V. cholerae from environmental isolates were observed CT-producing. These CT-producing strains amplified in 302 bp by PCR for the detection of ctx gene. All CT-producing strains hybridized with digoxigenin-labeled DNA probe, while CT-negative strains did not hybridize. Also hybridization tests results for detection of ctx gene consistent with PCR.

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Zoogloea Ramigera 115SLR로부터 다당류 생합성에 관여하는 유전자의 분리 및 염기서열 결정 (Cloning and Sequencing of a Gene Involved in the Biosynthesis of Exopolysaccharide in Zoogloea Ramigera 115SLR)

  • Sam-Pin Lee;Min Yoo
    • 대한의생명과학회지
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    • 제6권1호
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    • pp.1-9
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    • 2000
  • Zoogloea ramigera 115SLR로부터 다당류 생합성에 관여하는 유전자를 분리하기 위해서 균주의 genomic DNA로부터 제조된 gene bank로부터 plasmid pLEX3이 얻어졌다. 이로부터 재조합된 5.0 kb DNA fragment를 포함하는 plasmid pLEX10은 다당류의 형태를 변환시키는 유전자를 포함하고 있으며, 이중에서 upstream 영역에 해당하는 1.7 kb DNA fragment가 분리되었다. 1.7 kb DNA 염기서열의 결과로부터 단백질을 인지 할 수 있는 2개의 ORF가 존재하였으며, 50 kDa 단백질을 인지 할 수 있는 ORF3은 X. campestris의 다당류 생합성 유전자들인 gumC와 R. meliloti의 exoP와 아미노산의 동질성을 나타내었다. ORF4는 N-terminal 영역이 결여된 단백질을 인지하며, Thermotoga maritime의 다당류 export에 관여하는 단백질과 동질성을 보였다. Z. ramigera 115SLR and Z. ramigera 115SLR/pLEX10은 각각 slime또는 capsule 형태의 다당류를 생합성하며 이들로부터 생합성된 다당류양은 각각 0.26% (w/v) and 0.16% (w/v)였다.

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유전공학적으로 변형시킨 4CB 분해세균 및 그 유전자 DNA에 대한 수계에서의 분자생태학적 안정성 (Molecular Ecological Stabilities of Genetically Modified 4CB-Degrading Bacteria and Their Gene DNAs in Water Environments)

  • Park, Sang-Ho;Myong-Ja Kwak;Ji-Young Kim;Chi-Kyung Kim
    • The Korean Journal of Ecology
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    • 제18권1호
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    • pp.109-120
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    • 1995
  • As the genetically modified microorganisms (GMMs) and their recombinant plasmid DNAs could be released into natural environments, their stabilities and impacts to indigenous microorganisls have become very importhant research subjects concerning with environmental and ecological aspects. In this study, the genetically modified E. coli CU103 and its recombinant pCU103 plasmid DNA, in which pcbCD genes involving in degradation of biphenyl and 4-chlorobiphenyl were cloned, were studied for their survival and stability in several different waters established under laboratory conditions. E. coli CU103 and its host E. coli XL1-Blue survived longer in sterile distilled water (SDW) and filtered autoclaved river water (FAW) than in filtered river water (FW). A lot of extracellular DNAs were released from E. coli CU103 by lytic action of phages in FW and the released DNAs were degraded by DNase dissolved in the water. Such effects of the factors in FW on stability of the recombinant pCU103 plasmid were also observed in the results of gel electrophoresis, quantitative analysis with bisbenzimide, and transformation assay. Therefore, the recombinant plasmids of pCU103 were found to be readily liberated from the genetically modified E. coli CU103 into waters by normal metabolic processes and lysis of cells. And the plasmid DNAs were quite stable in waters, but their stabilities could be affected by physicoKDICical and biological factors in non-sterile natural waters.

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Xanthomonas sp. YL-37의 Alkaline Protease 유전자의 클로닝 (Cloning of a Alkaline Protease Gene from Xanthomonas sp. YL-37)

  • 이대희;김수경;이승철;윤병대;황용일
    • 한국미생물·생명공학회지
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    • 제23권2호
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    • pp.145-149
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    • 1995
  • For the purpose of developing a new biodegradable detergent, we have isolated a gene encoding wide-range temperature applicable alkaline protease from Xanthomonas sp. YL-37 (Lee et al., 1994, Kor. J. Appl. Microbiol. Biotechnol.). An alkaline protease gene was isolated from the gene bank that was prepared from the chromosomal DNA of Xanthomonas sp. YL-37. From the results of agarose gel electrophoresis and a restriction enzyme mapping, a 2.7 kb DNA fragment containing the alkaline protease gene was inserted in the plasmid pUC9. Extracellular activity of a clone having alkaline protease gene was detected on SDS-polyacrylamide gel with activity staining assay. The molecular weight of alkaline protease was determined to be about 64 kDa from 11% SDS-PAGE analysis. Alkaline protease activity, produced from E. coli which harboring the plasmid, showed no difference at reaction temperature 20, 30 and 40$\circ$C, respectively. This result showed that alkaline protease produced from E. coli harboring the plasmid was apparently the same as that of Xanthomonas sp. YL-37.

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Molecular Cloning and Expression of a Xylanase Gene from Alkalophilic Bacillus sp.

  • Yu, Ju-Hyun;Kang, Yun-Sook;Park, Young-Seo;Bai, Dong-Hoon
    • Journal of Microbiology and Biotechnology
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    • 제1권4호
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    • pp.251-255
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    • 1991
  • A 16 kilobase (kb) HindIII fragment of alkalophilic Bacillus sp. YC-335 containing a gene for xylanase synthesis was inserted at the HindIII site of pBR322 and cloned in Escherichia coli HB101. After subcloning of recombinant plasmid pYS52, the 1.5 kb fragment was found to code for xylanase activity, and the hybrid plasmid was named pYS55. The DNA insert of the plasmid was subjected to restriction enzyme mapping, which showed that pYS55 had single site for PuvII and SstI in the 1.5 kb insert fragment. Southern hybridization analysis revealed that the cloned gene was hybridized with chromosomal DNA from alkalophilic Bacillus sp. YC-335. About 64% of the enzyme activity was observed in the extracellular and periplasmic space of E. coli HB10l carrying pYS55.

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The Cell and Genetic Characteristics of Slime Forming Bacteria on Antibiotic Resistance in the Paper-making Process

  • Kim, Eun-Hee;Kang, Kyu-Young;Jo, Byoung-Muk;Oh, Jung-Soo
    • Journal of the Korean Wood Science and Technology
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    • 제30권3호
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    • pp.26-33
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    • 2002
  • The seven strains, Pseudomonas paucimobilis, Pseudomonas cepacia, Staphylococcus auricularis, Staphylococcus saprophyticus, Acidovorax spp., Acinetobacter calcoaceticus, and Actinobacillus capsulatus were tested with three slimicides. Most of the tested bacteria were inhibited with slimicide K (an isothiazolin based compound), even at its low concentration, except for Actinobacillus capsulatus and Staphylococcus auricularis. Both slimicides B (an organic bromine based compound) and S (aldehydes) also couldn't prevent these two strains even at their highest concentration. Five different sizes of plasmid DNA were isolated from Actinobacillus capsulatus. Staphylococcus auricularis, a gram-positive bacteria, showed the slimy substances around its cell distinctively. The results suggest that two strains, Actinobacillus capsulatus, Staphylococcus auricularis, have presumably developed a resistance to the slimicide, by plasmid DNA or slimy substance. Our findings also suggest that not only gram-negative bacteria, but also gram-positive bacteria should not be neglected