• Journal of Environmental Science International
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• v.17 no.8
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• pp.879-889
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• 2008

Community structure of benthic macroinvertebrates was investigated from Gigye stream, Pohang, Korea from May to November, 2007. As results, total of 108 species of macroinvertebrates under 49 families, 15 orders, 5 classes in 3 phyla were identified. The number of species was the most abundantly revealed in aquatic insects (class Insecta) with 86 species (82.6%) under 7 orders. The phylum Mollusca (10 species, 9.2%) and the phylum Annelida (6 species, 5.6%) were followed in order. In the class Crustacea, 6 species (5.6%) were distributed. In aquatic insects, the order Odonata was the most abundant taxon (20 species, 23.3%). Seventeen species (19.8%) of the order Ephemeroptera and 16 species (18.6%) of the Coleoptera were followed. The primary dominant species in the stream was Cloeon dipterum of Ephemeroptera. For community analysis, the values of diversity index (H'), evenness index (J'), dominance index (DI) and richness index (RI) were studied and the average values of them were 5.65, 0.84, 0.13, and 13.18, respectively.

• The Korean Journal of Malacology
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• v.26 no.4
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• pp.317-326
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• 2010

The availability of fast and inexpensive sequencing technology has enabled researchers around the world to conduct many genome sequencing and expressed sequence tag (EST) projects of diverse organisms. In recent years, whole genome projects have been undertaken to sequence ten species from the phylum Mollusca. These include Aplysia californica, Lottia gigantea, Crassostrea virginica, Spisula solidissima, Mytilus californianus, Biomphalaria glabrata, Crepidula fornicata, Elysia chlorotica, Lottia scutum and Radix balthica. Additionally, complete mitochondrial genomes of 91 mollusks have been reported. In Korea, EST projects have been conducted in nine mollusk species that include Nesiohelix samarangae, Pisidium (Neopisidium) coreanum, Physa acuta, Incilaria fruhstorferi, Meretrix lusoria, Ruditapes philippinarum, Nordotis gigantea, Crassostrea gigas and Laternula elliptica. Finally, the mitochondrial genome projects from the Pacific Oyster (Crassostrea gigas) and the rock shell (Thais clavigera) have been conducted and reported. However, no systemic mollusk genome project has so far been conducted in Korea. In this report, the current status and research trends in mollusk genome study in Korea will be discussed.

• Economic and Environmental Geology
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• v.53 no.6
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• pp.729-742
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• 2020

In this study, we analyze seabottom conditions and characteristics integrated with topographic data, seafloor mosaic, underwater images and orthophoto(drone) of soft-hard bottom area around the Sib-Ri rock in the northern shore of the East Sea(Gyeongpo Beach, Gangneung). We obtained field survey data around the Sib-Ri rock(about 600 m × 600 m). The Sib-Ri rock is formed by two exposed rocks and surrounding reef. The artificial reef zone made by about 200 ~ 300 structures is shown the western area of the Sib-Ri rock. The underwater rock region is extended from the southwestern area of the exposed the Sib-Ri rock with 9 ~ 11 m depth range. The most broad rocky seabottom area is located in the southwestren area of the Sib-Ri rock with 10 ~ 13 m depth range. The study area were classified into 4 types of seabottom environment based on the analysis of bathymetric data, seafloor mosaics, composition of sediments and images(underwater and drone). The underwater rock zones(Type I) are the most distributed area around the Sib-Ri Rock(about 600 m × 600 m). The soft seabottom area made by sediments layer showed 2 types(Type II: gS(gravelly Sand), Type III: S(Sand)) in the areas between underwater rock zones and western part of the Sib-Ri rock(toward Gyeongpo Beach). The artificial reef zone with a lot of structures is located in the western part of the Sib-Ri rock. Marine algae(about 6 species), Phylum porifera(about 2 species), Phylum echinodermata(about 3 species), Phylum mollusca(about 3 species) and Phylum chordata(about 2 species) are dominant faunal group of underwater image analysis area(about 10 m × 10 m) in the northwestern part of the Sib-Ri rock. The habitat of Phylym mollusca(Lottia dorsuosa, Septifer virgatus) and Phylum arthropoda(Pollicipes mitella, Chthamalus challengeri hoek) appears in the intertidal zone of the Sib-Ri rock. And it is possible to estimate the range and distribution of the habitat based on the integrated study of orthphoto(drone) and bathymetry data. The integrated visualization and mapping techniques using seafloor mosaic images, sediments analysis, underwater images, orthophoto(drone) and topographic data can provide and contribute to figure out the seabottom conditions and characteristics in the shore of the East Sea.

• The Korean Journal of Malacology
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• v.27 no.4
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• pp.395-400
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• 2011

Phylogenetic analyses on the Phylum Mollusks has so far been conducted by many researchers in the world. However, there was no report on taxonomic analysis on Acila divaricata vigila which is belonging to Class Bivalvia, Subclass Protobranchia. In this study, we performed molecular phylogenetic analysis on Acila divaricata vigila using 16S rRNA sequence through maximum likelihood method. As a result, it is clearly divided into the legion of mollusk classification unit (when you zoom in order) and represented to support the current classification in the Phylum Mollusca belong to Class Bivalvia, Subclass Protobranchia, Subclass Pteriomorphia, Subclass Paleoheterodonta, Subclass Heterodonta and Subclass Anomalodesmacea. To our knowledge, this is the first report of molecular phylogenetic analysis on Acila divaricata vigila using 16S rRNA gene and these data suggests that 16S rRNA gene will be useful for analyzing the phylogenetic relationship of Subclass Protobranchia.

• BMB Reports
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• v.37 no.5
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• pp.625-628
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• 2004

Homeobox genes encode a family of transcription factors that have essential roles in regulating the development of eukaryotes. Although they have been extensively studied in different phyla, relatively little is known about homeobox-containing genes and their function in molluscs. In this study, we used a polymerase chain reaction to investigate homeobox genes in the bivalve mollusc Pecten maximus. Four different homeobox sequences were identified; two were homologues of the non-Hox cluster gene caudal and the two remaining sequences had a significant homology to the ANT-C gene proboscipedia. These sequences represent the first cad and pb homologues isolated from a member of the class Bivalvia, phylum Mollusca.

• Fisheries and Aquatic Sciences
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• v.20 no.6
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• pp.8.1-8.18
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• 2017

Background: Metallothionein (MT) is a multifunctional protein playing important roles in homeostatic regulation and detoxification of metals. Mollusk species have been considered as useful sentinel platforms for MT-based biomarker approaches, and they have been reported to display an extraordinary structural diversity of MT proteins. However, potential diversity of molluskan MTs has not been fully explored and recent updates have suggested the need of revision of evolutionary hypothesis for molluskan MTs. Results: Based on bioinformatic analysis and phylogenetic evidences, novel divergence mechanisms and paths were hypothesized in both gastropod and bivalve MT groups. Our analyses are suggestive of the taxon- or lineage-specific domain multiplication/duplication from the ancestral or prototypic MT. Diversification and selection of molluskan MTs might be driven by the needs for acquiring metal selectiveness, specialized novel function, and improved capacity of metal detoxification under environmentally stressed conditions. Conclusion: The structural diversity and variations of molluskan MTs are significantly larger than previously understood. Undoubtedly, molluskan MTs have undergone dynamic divergent processes in their evolutionary histories, giving rise to the great diversity of domain structures in extant MT isoforms. Novel evolutionary paths for molluskan MTs newly proposed in this review could shed additional light onto the revision of the hypothesis for evolutionary differentiation of MTs in the molluskan lineage.

• Journal of Environmental Science International
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• v.27 no.11
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• pp.1007-1021
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• 2018

Community dynamics of benthic macroinvertebrates and biological evaluation of water quality were investigated at Gigyecheon of Pohang and Gyeongju, Korea. The survey was carried out at 8 sites from May to October, 2017. As a result, total of 104 species under 54 families, 15 orders, 8 classes in 4 phyla with 5,052 individuals were revealed. The number of species was the most abundantly identified in aquatic insects, 76 species under 34 families, 6 orders. Among them, the order Odonata was the most abundant taxon as 21 species(20.2%). The most abundant individuals were collected in the phylum Mollusca as 1,453 individuals(28.8%). Various species appeared dominantly at each site by season, and the most dominant species was Caridina denticulata denticulata belonging to the class Malacostraca with 0.08 of dominance index. According to the results of community structure analyses, the diversity and richness indices were the highest at site II, the evenness index was the highest at site I, and the dominance index was the highest at site IV. The number of species and individuals of gathering collectors were the highest among functional feeding groups. Those of sprawlers were the highest among habitat orientation groups. The ESB showed a tendency to change according to season and site, and it was the highest in May at most surveyed sites. The KSI was also somewhat fluctuated according to season and site. From these indices, average biological water quality was evaluated as class II.

• The Journal of Fisheries Business Administration
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• v.54 no.3
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• pp.69-92
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• 2023

The 'Japanese Useful Fisheries Classification Table', published in advance before the publication of the "Useful Fisheries of Japan", is the first data to classify and introduce fisheries animals and plants in a single table. Therefore, it had received public attention immediately. However, The academy of animal studies at that time quickly pointed out that this classification table was a mixture of traditional and modern classifications, and that there were too many errors. However, Yoshio Tanaka, who was in charge of revising Yamamoto Arikatana, that wrote the classification table, was not an adherent of traditional taxonomy, nor was he ignorant of modern taxonomy. Nevertheless, the classification table, which was quite different from the well-known zoological classification at that time, was prepared. For example, the top classifications of marine organism are not at the same level, but rather a mixture of phylum and class, while the water insect contains several phylums, including Arthropoda, Echinodermata, Mollusca, and Coelenterata. As such, the method of classification of animals in the classification table was hard to understand in the zoological academy at that time. The reason for this unusual taxonomy was that the classification table showed classification of useful fisheries products, not intended to convey academic classification. In other words, it is not for the purpose of academic classification of all fishery products, but for the purpose of presenting standards that can be easily understood by those engaged in the collection, manufacture, and aquaculture of fishery products. This principle of 'Useful Fisheries of Japan' is also ascertained in the "Fishing Methods of Japan" and "Fishery Products of Japan". Regarding the collection and processing of marine products, it could have shown how to catch whales, which are mammals, and how to dismantle whales and obtain oil and meat, according to academic classifications. However, the first appearances in the book include dried squid, abalone, shark fins, and sea cucumbers. In other words, the most important fishery products at that time are presented first. The contents of the classification table, which is considered somewhat bizarre, show where the purpose to compile Useful Fisheries of Japan.

• Journal of Korean Society on Water Environment
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• v.31 no.6
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• pp.665-679
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• 2015

Yearly mean temperature in the 29 lakes surveyed ranges from 12.6 (Suncheon) to 13.9℃ (Mokpo), the lowest in −2.7℃ (January) and the highest in 25.9℃ (July). Monthly mean the amount of rainfall recorded the highest of 336.7 mm in August and the lowest with 4.9 mm in January. A total of 424 species of phytoplankton were identified. They were 157 Chlorophyceae, 161 Bacillariophyceae, 39 Cyanophyceae, and 67 other algal taxa. The phytoplankton diversity were low in stream type reservoirs such as Guemho, Youngsan and Youngam. The population density of phytoplankton ranged from 19 to 53,161 cells/ml. Annual mean of total zooplankton abundance in 45 sites was 369±827 ind./L (n=180). Rotifers were the most common taxa and their relative abundance was high (65~77%). The benthic microinvertebrate fauna of 10 reservoirs of Jeonnam province were 71 species of 61 genera of 44 families of 16 orders of 7 classes of 4 phyla. Aquatic insects of Phylum Arthropoda were 50 species of 44 genera of 28 families of 6 orders. The number of individuals was 6,132. Diptera was highiest (41.3%), and Ephemeroptera (31.0%), Trichoptera (17.5%), Anellida (3.8%), Mollusca (3.3%), Crustacea (0.4%). Large hydrophytes were identified 32 taxa, 2 varieties 30 species 26 genera and 20 families. Especially, Jijung and Juam lakes require management such as physical remove of this ecosystem disturbance field plants. Fishes were identified total 44 taxa, such as 25 Cyprinidae (56.8%), 8 Cobitidae (17.0%), 3 Gobiidae (6.4%), 2 Bagridae (4.3%), 2 Osmeridae (4.3%), 2 Odontobutidae (4.3%), 2 Centrachidae (4.3%), 1 Siluridae (2.1%), and 1 Centropomidae (2.1%). A pale chub was dominant species (18.9%).

• Korean Journal of Organic Agriculture
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• v.26 no.2
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• pp.297-316
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• 2018

The golden apple snail (GAS, Pomacea canaliculata) is an invasive freshwater snail. The GAS was introduced in Korea without prior studies on the possibility of crop damage or its impact on the natural ecosystem. The freshwater apple snails can be found typically in ponds, rice paddies, irrigation canals, roadside ditches or slower portions of streams. In this study, we were carried out to investigate the assessment of physiological and ecological characteristics, environmental characteristics inhabited area in winter season and cause of massive death at one time of golden apple snails used for weed control in wet rice paddies. The GAS was introduced from Japan to Korea for commercial production as a dietary protein supplement. The golden apple snail was also used a recently for weed control in wet rice cultivation. The species of freshwater Pomacea snails is belonging to the genus Pomacea, family ampulariidae, order mesogastropoda, subclass pulmonata, class gastropoda, phylum mollusca. The GAS spread into irrigation ditches and natural waterways. It is now distributed in ponds and canals near rice fields of southern parts of the country and has overwintered. It increases its cold hardiness before winter. However, the physiological mechanism of cold hardiness in molluscs is poorly understood, especially in freshwater molluscs. Our results on physio-ecological characteristics of the Pomacea apple snail showed that the ratio of males to females was 1: 1.99~2.33. The daily growth was 87.7 mg in weight, 0.31 mm in height and 0.33 mm in width of the their shell. On the other hand, the golden apple snails were very high to resistance on drying condition and survived rate about 80% up to 3 months. The inhabitation of GAS was no statistical significant impacts on the water quality. An important property of aqueous solutions is agricultural water quality because it affects chemical and biochemical properties such as chemical reactions, equilibrium conditions, and biological toxicity. The death rate of weed control apple snails by Ostracoda (Stenocypris hislopi) was only 2.86% and 5.71% depending on the density. Therefore, GAS was not a direct death caused by Ostracoda (Stenocypris hislopi).