• Title/Summary/Keyword: Phenotypic Trend

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Genetic Trend for Growth in a Closed Indian Herd of Landrace × Desi Crossbreds

  • Gaur, G.K.;Ahlawat, S.P.S.;Chhabra, A.K.;Paul, Satya
    • Asian-Australasian Journal of Animal Sciences
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    • v.11 no.4
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    • pp.363-367
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    • 1998
  • This study has objectives of to estimate the genetic and phenotypic trend for growth in a closed herd of Landrace $\times$ desi crossbreds. The possibility of early selection of boars was also investigated in order to reduce generation interval and thus, to enhance response per year in selection programmes. The data originated from Livestock Production Research (Pigs), Indian Veterinary Research Institute (IVRI), Izatnagar (UP), India - a unit of All India Coordinated research Project on Pigs (AICRP on Pigs). Data consisted of 891 crossbred piglets, progeny of 29 boars. The piglets were born in 132 parities of 72 sows between 8 years from 1987 to 1994. Records on weight at birth, at 2 weeks interval upto 8 weeks of age (Wl, W2, ${\cdots}\;{\cdots}$ W8) and at 16th week (W16) were used in this investigation. BLLTP estimates of the sires were computed. Breeding value of each sire was estimated as twice of sire and sire group solutions. Phenotypic trend was estimated as regression of weight performance on year. Genetic trend was computed by estimating regression of breeding value of sires on time. Average body weights ranged from 0.92 kg (W1) to 18.95 kg (W16) and showed a continuous increase over age. Heritabilities of the weight at 4th and 6th week were medium (0.29 and 0.14). Rest of the weights were highly heritable. The product moment and rank, both correlations were high between breeding value for W6 and W16 (0.68 and 0.70). This shows that sire selection for W6 can be successfully implemented in order to achieve sufficient genetic improvement in growth. Phenotypic trend was positive at all ages. The phenotypic regression coefficient ranged from 0.02 kg at birth to 0.40 kg at 16 weeks. Genetic trend was also positive. The regression coefficients of average breeding value of sires on time showed a range of 1.471 kg (0.021 to 1.492 kg) for different weights. These coefficients were significant and higher than their corresponding phenotypic regression coefficient.

Genetic Parameters and Annual Trends for Birth and Weaning Weights of a Northeastern Thai Indigenous Cattle Line

  • Intaratham, W.;Koonawootrittriron, S.;Sopannarath, P.;Graser, H.-U.;Tumwasorn, S.
    • Asian-Australasian Journal of Animal Sciences
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    • v.21 no.4
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    • pp.478-483
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    • 2008
  • Records of a Northeastern Thai indigenous cattle line population were used to estimate genetic parameters and annual trends for calf weights. The data set comprised records of 1,922 and 1,489 animals for birth and weaning weight, respectively born from 1993 to 2004. A bivariate analysis was carried out for variance and covariance components estimations using average information restricted maximum likelihood procedure. Average estimated breeding value and maternal breeding value of the animals born in 1993 were set to zero as a base group. Genetic trends of each trait were calculated by regressing average estimated breeding values and maternal breeding values on birth year of calves. Phenotypic trends for each trait were calculated by regressing the yearly adjusted weight on birth year of calves. The results revealed that the estimate of direct heritability, maternal heritability and maternal permanent environmental variance as a proportion of phenotypic variance for birth and weaning weight was 0.40, 0.14 and 0.04; 0.27, 0.05 and 0.23, respectively. Direct heritability was moderately heritable and genetic improvement through selection can be achieved. The estimate of phenotypic, direct genetic, maternal genetic and maternal permanent environmental correlation between birth and weaning weight was 0.48, 0.65, 0.98 and 0.73, respectively. The phenotypic trend, genetic trends of estimated breeding value and maternal breeding value for birth weight was 0.18, 0.04 and 0.01 kg/year, respectively. The phenotypic trend, genetic trends of estimated breeding value and maternal breeding value for weaning weight was -1.36, 0.32 and 0.03 kg/year, respectively. As maternal genetic effect was considerably less important than direct genetic effect, selection for improved weaning weight of this Northeastern Thai indigenous cattle line can place more emphasis on the direct genetic effect.

Estimation of Genetic Trend on Racing Time of Thoroughbred Racehorses (더러브렛 경주마의 주파기록에 대한 유전적 개량량의 추정)

  • Park, K.D.;Son, S.K.;Rho, S.H.;Cho, K.H.;Lee, Z.H.;Cho, B.W.
    • Journal of Animal Science and Technology
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    • v.50 no.1
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    • pp.27-32
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    • 2008
  • The objective of this study was to estimate genetic trend on racing time of Thoroughbred racehorses in Korea, using a total of 209,725 racing records of 9,934 racehorses collection from January, 1990 to December, 2006. Phenotypic trends for all distances were negative at a rate of -0.148, -0.137, -0.137 and -0.139 second per race year for distances of 1,000m, 1,400m less than, 1,700m more than and overall dataset, respectively. Environmental trends were similar to phenotypic ones in all distances and trends in permanent environmental and jockey effects by race year were not found. Average genetic improvements for racing time were -0.037 and -0.030 second per race year at the 1,000m and overall dataset, respectively, which is low. But Genetic trends were decreased consistently. There is need to establish the genetic improvement program for quality of racehorses.

Univariate and Multivariate Analysis of Phenotypic Traits in Mung Beans Reveals Diversity Among Korean, Indian, and Chinese Accessions

  • Kebede Taye Desta;Young-ah Jeon;Myoung-Jae Shin;Yu-Mi Choi;Jungyoon Yi;Hyemyeong Yoon
    • Korean Journal of Plant Resources
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    • v.37 no.3
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    • pp.270-306
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    • 2024
  • This study investigated the diversity of 323 mung bean accessions from Korea, China, and India, along with six cultivars, using 22 agronomical traits. The standardized Shannon-Weaver index (H') for the qualitative traits ranged from 0.11 (terminal leaflet shape) to 0.98 (pubescence density of pod). Likewise, the coefficient of variation for the quantitative traits ranged from 8.76% (days to maturity (DM)) to 79.91% (lodging rate (LR)), indicating a wide genetic variance. Hypocotyl color, pod color, seed shape, and seed coat surface lust showed different distributions among Korean, Indian, and Chinese accessions. Chinese accessions had the highest average germination rate, DM, days from flowering to maturity, and one-hundred seeds weight, followed by Korean and Indian accessions, while the number of seeds per pod (SPP) displayed the opposite trend, with all except SPP showing significant variation (p < 0.05). Similarly, plant height, days to flowering, and number of pods per plant increased in the order of India > Korea > China, with LR showing the opposite trend (p < 0.05). The mung bean accessions were grouped into four major clusters using hierarchical cluster analysis supported by principal component analyses, and all of the quantitative traits showed significant variations between the clusters (p < 0.05). Generally, the mung bean accessions investigated in this study exhibited wide phenotypic trait variations, which could be beneficial for future genomics studies. Moreover, this study identified 77 accessions that outperformed the controls. Consequently, these superior accessions could provide a wide spectrum of options during the development of improved mung bean varieties.

Effects of Temperature and Estradiol-$17{\beta}$ Treatment on Phenotypic Sex Determination in Different Genotypes of Nile Tilapia (Oreochromis niloticus) (수온 및 estradiol-$17{\beta}$ 처리가 나일틸라피아(Oreochromis niloticus)의 성결정에 미치는 효과)

  • Noh, Choong-Hwan;Nam, Yoon-Kwon;Kim, Dong-Soo
    • Korean Journal of Ichthyology
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    • v.9 no.2
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    • pp.195-201
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    • 1997
  • Environmental sex determination by temperature was revealed in different genotypes (putative XX : XY=1 : 1, 1 : 0, 0 : 1) of nile tilapia (Oreochromis nitoticus). There was no significant deviation from expected sex ratio in control group treated with $27^{\circ}C$, while the temperature regimes of $33^{\circ}C$ and $36^{\circ}C$ during labile period induced the differentiation of phenotypic sex into female with a clear trend forward percent female with increasing temperature. The administration of 240 and/or 480 mg estradiol-$17{\beta}$ ($E_2$)/kg diet also showed the additional effect to derive the phenotypic sex to female in putative XX : XY=1 : 1 and 0 : 1 progeny groups.

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Phenotypic Trend and Environmental Factors for Carcass Traits in Commercial Pigs (비육돈의 도체성적 변화 추세와 환경적인 요인 분석)

  • Kim, B.W.;Park, J.W.;Kim, H.Y.;Seo, J.T.;Lee, J.G.
    • Journal of agriculture & life science
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    • v.43 no.1
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    • pp.35-41
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    • 2009
  • This study was conducted to analyze the phenotypic trends and environmental factors affecting the following carcass traits : slaughter weight, backfat thickness and carcass grade, in 1,251,572 commercial pigs for 7 years from 1999 to 2005. The average slaughter weight of female, male and barrow were $82.97{\pm}0.008$ $82.00{\pm}0.090$ and $82.79{\pm}0.008$, respectively. The average backfat thickness of female, male and barrow were $19.27{\pm}0.006$, $15.99{\pm}0.072$ and $22.49{\pm}0.006mm$, respectively. The slaughter weight tended to increase over the slaughter years, for backfat thickness remained, even though a significant drop of backfat thickness on 2002($18.75{\pm}0.027$). The slaughter weight was significantly higher in winter($83.29{\pm}0.032$), while the backfat thickness was significantly lower in summer($19.10{\pm}0.026$). The carcass grade A increased from 2000 to 2003, but decreased slightly after 2003. On the contrary, the carcass grade B decreased from 2000 to 2003, but increased slightly after 2003.

DNA chip technology

  • Lee, Sang-Yeop;Yun, Seong-Ho;Choe, Jong-Gil;Im, Geun-Bae
    • 한국생물공학회:학술대회논문집
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    • 2000.11a
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    • pp.119-122
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    • 2000
  • Biological science is being revolutionized by the availability of much sequence information from many genome project With the advanced technology at hand, main trend in biological research is rapidly changing from a structural DNA analysis to understanding cellular function of the DNA sequences. Combined with mechanics, computer, bioinformatics and other advanced technologies, DNA chip technology provides numerous applications because of its robustness, accuracy, and automation. DNA chip is expected to become an indispensable tool in fields of biology, biotechnology, drug discovery, and other application areas. DNA chip can be used for mutation and polymorphism detection, gene expression monitoring and phenotypic analysis as well. If DNA chip is used for the development of pharmaceutical products, it can considerably reduce the cost and time for the entire process of drug discovery and development, and can also contribute in developing personal drugs.

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Effects of season and age at first calving on genetic and phenotypic characteristics of lactation curve parameters in Holstein cows

  • Torshizi, Mahdi Elahi
    • Journal of Animal Science and Technology
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    • v.58 no.2
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    • pp.8.1-8.14
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    • 2016
  • In this research data representing 72,946 primiparous cows from 724 herds with 638,063 total test day records calved between 2001 and 2011. These data were analysed to determine the effect of age at first and season of calving on parameters of the Wood lactation curve. Also, genetic trend of the lactation curve parameters in different calving years were evaluated. The results indicate that the highest rate of atypical lactation curve was related to cows that calved in summer (28.05 %). The maximum phenotypic relationship between initial milk yield and total 305-d milk yield was observed in cows calved in spring (0.40). The role of peak yield is more than peak time on 305-d total milk yield in primiparous Holstein. One month increase in age at first calving from 18 to 26 month raised 305-d milk yield by around 138 kg and from 27 to 32 month decreased by 61 kg. The persistency of lactation between 101 and 200 days is higher than that of 201-305 days. Our results indicate that the shape of lactation curve is largely dependent on the season of calving (higher level of milk production in cows which calved in autumn and winter). The heritabilities of parameters of lactation curve and persistency measures were low. The genetic trends for peak time, peak yield and 305-d milk yields were positive and estimated to be 0.019, 0.021 and 8.13 kg/year respectively. So the range from 24 to 26.5 month of calving is the optimum calving time in primiparous Holstein for maximizing 305-d milk yield.

Lifetime Performance of Nili-ravi Buffaloes in Pakistan

  • Bashir, M.K.;Khan, M.S.;Bhatti, S.A.;Iqbal, A.
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.5
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    • pp.661-668
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    • 2007
  • Data on 1,037 Nili-Ravi buffaloes from four institutional herds were used to study lifetime milk yield, herd life, productive life and breeding efficiency. A general linear model was used to study the environmental effects while an animal model having herd, year of birth and age at first calving (as covariate) along with random animal effect was used to estimate breeding values. The lifetime milk yield, herd life, productive life and breeding efficiency averaged $7,723{\pm}164$ kg, $3,990{\pm}41$ days, $1,061{\pm}19$ days and 64 percent, respectively. All the traits were significantly (p<0.01) affected by the year of birth and herd of calving, while the herd life was also affected (p<0.01) by the age at first calving. The heritabilities for lifetime milk yield, herd life, productive life and breeding efficiency were $0.093{\pm}0.056$, $0.001{\pm}0.055$, $0.144{\pm}0.079$ and 0.001, respectively. The definition for productive life, where each lactation gets credit upto 10 months had slightly better heritability and may be preferred over the definition where no limit is placed on lactation length. The genetic correlation between productive life and lifetime milk yield was low but high between productive life and herd life. The selection for productive life will increase herd life while lifetime milk yield will also improve. The overall phenotypic trend during the period under the study was negative for lifetime milk yield (-280 kg/year), herd life (-93 days), productive life (-42 days/year) and breeding efficiency (-0.36 percent/year), whereas the genetic trend was positive for lifetime milk yield (+15 kg/year) and productive life (+4 days/year).

Estimation of co-variance components, genetic parameters, and genetic trends of reproductive traits in community-based breeding program of Bonga sheep in Ethiopia

  • Areb, Ebadu;Getachew, Tesfaye;Kirmani, MA;G.silase, Tegbaru;Haile, Aynalem
    • Animal Bioscience
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    • v.34 no.9
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    • pp.1451-1459
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    • 2021
  • Objective: The objectives of the study were to evaluate reproductive performance and selection response through genetic trend of community-based breeding programs (CBBPs) of Bonga sheep. Methods: Reproduction traits data were collected between 2012 and 2018 from Bonga sheep CBBPs. Phenotypic performance was analyzed using the general linear model procedures of Statistical Analysis System. Genetic parameters were estimated by univariate animal model for age at first lambing (AFL) and repeatability models for lambing interval (LI), litter size (LS), and annual reproductive rate (ARR) traits using restricted maximum likelihood method of WOMBAT. For correlations bivariate animal model was used. Best model was chosen based on likelihood ratio test. The genetic trends were estimated by the weighted regression of the average breeding value of the animals on the year of birth/lambing. Results: The overall least squares mean±standard error of AFL, LI, LS, and ARR were 375±12.5, 284±9.9, 1.45±0.010, and 2.31±0.050, respectively. Direct heritability estimates for AFL, LI, LS, and ARR were 0.07±0.190, 0.06±0.120, 0.18±0.070, and 0.25±0.203, respectively. The low heritability for both AFL and LI showed that these traits respond little to selection programs but rather highly depend on animal management options. The annual genetic gains were -0.0281 days, -0.016 days, -0.0002 lambs and 0.0003 lambs for AFL, LI, LS, and ARR, respectively. Conclusion: Implications of the result to future improvement programs were improving management of animals, conservation of prolific flocks and out scaling the CBBP to get better results.