• 제목/요약/키워드: Phage

검색결과 446건 처리시간 0.022초

Effects of Deamido-$\textrm{NAD}^{+}$ on Self-splicing of Primary Transcripts of Phage T4 Thymidylate Synthase Gene

  • Park, In Kook
    • Animal cells and systems
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    • 제4권2호
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    • pp.141-144
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    • 2000
  • Effects of deamido-$\textrm{NAD}^{+}$on self-splicing of primary transcripts of the phage T4 thymidylate synthase gene (td) was investigated. The self-splicing was not affected by deamido-$\textrm{NAD}^{+}$- at concentrations up to 2 mM. However, it began to decrease at 5 mM and the formation of splicing products such as the linear intron, intron-exon 2 and exon 1-exon 2, was slightly reduced. At 20 mM the self-splicing activity was almost completely abolished. This analog of the coenzyme $\textrm{NAD}^{+}$- inhibits the self-splicing of td intron RNA although it does not possess a guanidine group in its structure. The analysis of inhibitory concentrations and structural examination suggests that the key structural features of deamido-$\textrm{NAD}^{+}$ responsible for the inhibition of splicing may be the ADP-ribose moiety.

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Identification of a Deoxyribonuclease I Inhibitor from a Phage-Peptide Library

  • Choi, Suk-Jung;Sperinde, Jeffrey J.;Szoka, Francis C. Jr.
    • Molecules and Cells
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    • 제19권1호
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    • pp.54-59
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    • 2005
  • Deoxyribonuclease I (DNase I) is a divalent cation dependent endonuclease and thought to be a significant barrier to effective gene delivery. The only known DNase I-specific inhibitor is monomeric actin which acts by forming a 1:1 complex with DNase I. Its use, however, is restricted because of tendency to polymerize under certain conditions. We screened two random phage peptide libraries of complexity $10^8$ and $10^9$ for DNase I binders as candidates for DNase I inhibitors. A number of DNase I-binding peptide sequences were identified. When these peptides were expressed as fusion proteins with Escherichia coli maltose binding protein, they inhibited the actin-DNase I interaction ($IC_{50}=0.1-0.7{\mu}M$) and DNA degradation by DNase I ($IC_{50}=0.8-8{\mu}M$). Plasmid protection activity in the presence of DNase I was also observed with the fusion proteins. These peptides have the potential to be a useful adjuvant for gene therapy using naked DNA.

중년 사무직 근로자의 자기주도형 여가활동 경험 (Experiences in Self-leading Leisure Activities of Middle-aged Office Workers)

  • 김정수
    • 수산해양교육연구
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    • 제28권5호
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    • pp.1348-1357
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    • 2016
  • This study was to describe the process on experiences of self-leading leisure activities and develop a substantive theory that explains lifestyle in middle-aged office workers. The participants were 12 persons who had participated in self-leading leisure activities. Data were collected with in-depth interviews and analyzed by grounded theory in Strauss and Corbin. Through analyzing process, 28 concepts, 14 subcategories, and seven categories were deduced. The periods of process were divided four stages, plateau, the phage of recognition in social duties, the phage of strengthen in competency, and the phage of reconstruct in successful lifestyle. The core category, 'disclosing of self-esteem' incorporated the relationship between and among all categories and explained the process. The findings indicate that self-leading leisure activities helped to their own health and developed their social activities. Therefore, we would consider in developing health promotion program about favoring leisure activities factors for the middle age office worker.

Mannose permease가 변형된 대장균 변이주에 대한 coliphage N4 감염의 저해 (Ingibition of coliphage N4 infection to escherichia coli mutant defective in mannose permease)

  • 김기태;유욱준
    • 미생물학회지
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    • 제25권3호
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    • pp.184-188
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    • 1987
  • Evidences that the mannose permease of Escherichia coli mediates the infection of N4 in early steps, were obtained as follows. First, A mutant strain of Escherichia coli which was resistant to both wild type N4 and lambda whose genome is Charon 4A containing human genomic fragments in its EcoR I site, could not use mannose efficiently. Second, N4 could not infect pel mutant strains which lack one or all of intact components of mannose permease. However, unknown alterations in N4 made it possible for the phage to infect pel mutant of E. coli. It also turned out to be clear that the receptor of N4 was different from that of lambda.

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Complete Genome Sequence of Salmonella Typhimurium-Specific Phage vB_SalA_KFSST3 Possessing Antibiofilm Activity

  • Su-Hyeon Kim;Jaein Choe;Mi-Kyung Park
    • 한국미생물·생명공학회지
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    • 제52권3호
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    • pp.339-341
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    • 2024
  • In a previous study, Salmonella Typhimurium-specific phage vB_SalA_KFSST3, which possess antibiofilm activity, was isolated and purified from wastewater used in slaughterhouses. This study aimed to perform bioinformatic analyses to investigate the genes associated with its antibiofilm activity. Phage genome consisted of a single chromosome of 156,555 bp with a GC content of 44.8%. Among its 202 open reading frames (ORFs), three tail spike proteins (TSPs; orf141, orf142, orf143) were identified with high confidence. All TSPs were predicted to encode putative depolymerase activities, including two endoglycosidases and one endorhamnosidase. The genome has been deposited in GenBank under the accession number PP_994976.1.

UV 불활성화 효과에 의거한 E.coli, RNA 및 DNA 박테리오파지의 대체 지표 미생물로서의 적용성 검토 (Applicability Investigation of E.coli, RNA and DNA Bacteriophages for Possible Indicator Microorganisms Based on the Inactivation Effectiveness by UV)

  • 김일호;와히드 마피아;타나카 히로아키
    • 대한환경공학회지
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    • 제32권11호
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    • pp.1063-1068
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    • 2010
  • 본 연구는 유효한 분변오염의 지표 미생물로서 제안되고 있는 E.coli와, 병원성 바이러스에 대한 지표 미생물로 추천되는 $Q{\ss}$ 파지의 UV 및 UV/$H_2O_2$에 대한 내성을 비교하였다. 이 결과에 의거, 병원성 바이러스 관리를 위한 E.coli 규제의 유효성을 고찰하였다. 또한, 병원성 바이러스에 대한 대체 지표 미생물로써, $Q{\ss}$ 파지, T4 및 lambda 파지의 실제 하수 2차 처리 수중에서의 UV 불활성화를 비교하였다. 실험결과, $Q{\ss}$ 파지와 E.coli는 UV에 대해 거의 동등한 내성을 보였으나, UV/$H_2O_2$ 공정에 대해서는 E.coli보다 $Q{\ss}$ 파지가 더 높은 내성을 보였다. 이로부터, $Q{\ss}$ 파지가 모든 병원성 바이러스의 UV 또는 UV/$H_2O_2$에 대한 내성을 대표한다고 할 수는 없을지라도, 지표 미생물로써 E.coli의 불활성화 효과에만 의존하는 것은, 소독공정에 따라서는 바이러스류에 대해 충분한 소독효과를 얻지 못할 수도 있음을 알 수 있었다. 한편, T4 및 lambda 등 DNA 파지와 불활성화를 비교하였을 경우, $Q{\ss}$ 파지가 UV에 대해 더 낮은 내성을 보였다. 따라서, 불활성화에 대한 지표 바이러스로써 $Q{\ss}$ 파지의 이용은 낮은 UV 조사량의 도입에 의해 결과적으로 불충분한 소독효과를 초래할 수도 있을 것 같다. 이 결과는, 병원성 바이러스류에 대해 보다 충분한 불활성화를 달성하기 위해서는 RNA 파지인 $Q{\ss}$보다 T4 및 lambda 등 DNA 파지가 지표 바이러스로써 보다 유효할 수 있음을 보여준다.

Genotyping, Phage Typing, and Antimicrobial Resistance of Salmonella Typhimurium Isolated from Pigs, Cattle, and Humans

  • Ju, Min-Seok;Kang, Zheng-Wu;Jung, Ji-Hun;Cho, Seong-Beom;Kim, Sung-Hun;Lee, Young-Ju;Hong, Chong-Hae;Pak, Son-Il;Hahn, Tae-Wook
    • 한국축산식품학회지
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    • 제31권1호
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    • pp.47-53
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    • 2011
  • Salmonella enterica serovar Typhimurium (ST) is one of the most common serovars isolated from humans and animals. It has been suggested that ST infections in Koreans are largely due to the consumption of contaminated pork and beef. To investigate the genotypes, phage types, and antimicrobial resistance patterns for ST isolates of different origins, a total of 70 ST strains, including 19 isolates from humans, 44 isolates from pigs, and 6 isolates from cattle, were analyzed using pulsedfield gel electrophoresis (PFGE), phage typing, and antimicrobial susceptibility tests. Forty-three distinct PFGE patterns were generated from 70 ST isolates, which were grouped into 14 PFGE groups (from A to N) at the level of 75% similarity. The most prevalent group was the A (A1-A17 subtypes) group, encompassing 54.5% (38/70) of ST isolates. ST isolates from pigs and cattle mostly belong to groups A and L, whereas ST isolates from humans mostly belong to groups F and C. Antimicrobial susceptibility tests using 11 antimicrobial agents showed that resistance to tetracycline (TE) (81.4%) was highly prevalent, followed by streptomycin (S) (64.3%) and nalidixic acid (NA) (31.4%) resistance. A total of seventeen antimicrobial resistance patterns were observed. Only 8.6% of isolates, including a reference strain, were susceptible to all antimicrobial agents tested. The most prevalent resistance pattern was TE-S (37.1%), which was seen in 66.6% of bovine, 40.8% of swine and 21.1% of human isolates. Three ST isolates from humans (15.9%) showed resistance to 7-8 antimicrobials. The most predominant phage type (PT) was U302 (64.3%), followed by DT170 (10.0%). PFGE types did not coincide with antimicrobial resistance patterns and phage types; therefore, the combination of those types allowed for further differentiation between tested ST isolates.

소와 돼지유래 다제내성 Salmonella속 균의 분자유전학적 특성 (Molecular genetic characterization of multiple antimicrobial resistant Salmonella spp. isolated from pigs and cattle)

  • 이우원;정병열;이강록;이동수;김용환
    • 한국동물위생학회지
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    • 제32권1호
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    • pp.61-76
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    • 2009
  • At the present study, it was aimed to explore the molecular genetic characterization of multiple antimicrobial resistant Salmonella spp. isolates from pigs and cattle. A total of 138 Salmonella Typhimurium (S. Typhimurium) isolates were typed with phage, among them, 83.3% of S. Typhimurium tested could divide into a 10 phage types. Definitive type 193 (DT193) (25.4%) and DT195 (24.6%) were exhibited as the dominant types. DT104 and U302 were found from pigs and cattle. On the other hand, S. Enteritidis had 6 phage types, of them, phage type 21 (PT21) and PT11b were the popular types. In the plasmid profiles, 135 of S. Typhimurium isolates were exhibited 1 to 6 plasmid bands which molecular weight ranged from 90 to 2kb. 35 isolates (25.4%) harbored a 90kb plasmid which is thought to be the serotype specific virulence plasmid. Two of twenty five S. Enteritidis had common plasmids at 2 and 1.5kb. With multiplex polymerase chain reaction, virulence genes (invA and spvC) were detected from all Salmonella spp. from 167 of S. Typhimurium, S. Enteritidis and chloramphenicol resistant S. Schwarzengrund, but some drug resistant genes, such as PSE-1, cml/tetR and flo were not determined but other drug resistant genes, for example TEM and int were found. The detection rates of spvC, TEM and int gene was 35.3%, 29.3% and 72.5%, respectively. The TEM gene was highly popular in S. Typhimurium, which was detected from ampicillin and amoxicillin resistant strains as 95.9%. int gene was able to detect from all the isolates identified as multidrug resistsnt (MDR), particularly DT193 was thought as the most prevalent virulence and multidrug resistance isolate. The major plasmid profile and drug resistance pattern of DT193 were 90, 40, 10.5, 6.3, 3.0kb and ACCbDNaPSSuT, respectively. MDR was commonly found in other phage types, particularly DT104, U302 and DT203.

생물 공학 의약품의 품질관리에 관한 연구(비방사능 물질 표지법을 이용한 숙주유래 DNA의 검출법 개발)

  • 용군호;민홍기;김창민;오호정;한강현;최규실
    • 한국응용약물학회:학술대회논문집
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    • 한국응용약물학회 1993년도 제2회 신약개발 연구발표회 초록집
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    • pp.59-59
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    • 1993
  • 비방사능물질인 Biotin을 DNA probe에 표지하여 nonisotopic hybridization 방법을 사용하여 감도를 높임으로써, 손쉽게 생물공학 의약품의 품질관리에 사용되도록 하였다. Bethesda Research Laboratories(BRL) 회사 제품인 biotinylated probes-avidin alkaline phosphatase를 이용한 chemiluminescene detection방법으로 행하여 λ phage DNA, yeast DNA, E.coil DNA의 한계 검출 농도를 알아내고, 생물 공학 제품에 적용하였다. Dot blot hybridization 방법으로 행하여 λ phage DNA는 0.1pg, Yeast DHA는 4.5pg, E. coli DNA는 8.9pg까지 검출되었고, 기존 생물공학 제품에서는 숙주 유래 DNA가 전혀 검출되지 않았다.

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EFFECT OF PATULIN ON THE GROWTH OF BACTERIOPHAGE M13

  • Lee, Kil-Soo
    • Toxicological Research
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    • 제5권1호
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    • pp.53-59
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    • 1989
  • A mycotoxin Patulin, isolated from apple juice medium cultured with Penicillium patulum NRRL5259, was purified through acid aluminum column using ethyl ether as eluent. The yield of purified patulin crystal was 3mg/ml culture medium after 8 days of shaking culture at 28C. The growth rate of Escherichia coli K12JM103 infected with bacteriophage M13 was decreased by patulin at the concentration range of 1Mug/ml to 10Mu/nl. ED50 of patulin for the bacterial growth was 4.5Mug/ml and 10Mug/ml of patulin caused maximum inhibitory effect (60% inhibition) on the growth.

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